Basic Information

Insect: Salpingus planirostris
Gene Symbol: -
Assembly: GCA_949788335.1
Location: OX460924.1:5479281-5483131[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.049 4 8.1 0.1 2 23 236 258 235 258 0.89

2 16 0.00042 0.034 14.6 0.3 1 23 311 334 311 334 0.97

3 16 0.96 79 4.0 0.1 1 23 372 394 372 394 0.94

4 16 0.0004 0.032 14.6 4.6 1 23 456 479 456 479 0.96

5 16 0.013 1 9.9 2.0 2 23 486 508 485 508 0.95

6 16 0.0014 0.11 12.9 3.2 1 21 625 645 625 646 0.94

7 16 0.013 1.1 9.9 0.9 2 23 658 680 657 680 0.91

8 16 0.89 73 4.1 1.3 1 23 683 706 683 706 0.95

9 16 0.016 1.3 9.6 0.1 2 23 712 733 711 733 0.96

10 16 0.045 3.7 8.2 0.2 1 23 737 760 737 760 0.97

11 16 0.12 9.6 6.9 0.4 2 23 767 789 766 789 0.94

12 16 0.081 6.6 7.4 0.9 2 23 798 820 797 820 0.94

13 16 0.27 22 5.7 0.5 3 23 827 848 826 848 0.94

14 16 2.8 2.3e+02 2.5 4.9 3 23 945 966 944 966 0.95

15 16 0.74 61 4.4 0.3 2 23 973 995 972 995 0.94

16 16 0.16 13 6.5 0.9 1 23 1008 1030 1008 1030 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.049	4	8.1	0.1	2	23	236	258	235	258	0.89
2	16	0.00042	0.034	14.6	0.3	1	23	311	334	311	334	0.97
3	16	0.96	79	4.0	0.1	1	23	372	394	372	394	0.94
4	16	0.0004	0.032	14.6	4.6	1	23	456	479	456	479	0.96
5	16	0.013	1	9.9	2.0	2	23	486	508	485	508	0.95
6	16	0.0014	0.11	12.9	3.2	1	21	625	645	625	646	0.94
7	16	0.013	1.1	9.9	0.9	2	23	658	680	657	680	0.91
8	16	0.89	73	4.1	1.3	1	23	683	706	683	706	0.95
9	16	0.016	1.3	9.6	0.1	2	23	712	733	711	733	0.96
10	16	0.045	3.7	8.2	0.2	1	23	737	760	737	760	0.97
11	16	0.12	9.6	6.9	0.4	2	23	767	789	766	789	0.94
12	16	0.081	6.6	7.4	0.9	2	23	798	820	797	820	0.94
13	16	0.27	22	5.7	0.5	3	23	827	848	826	848	0.94
14	16	2.8	2.3e+02	2.5	4.9	3	23	945	966	944	966	0.95
15	16	0.74	61	4.4	0.3	2	23	973	995	972	995	0.94
16	16	0.16	13	6.5	0.9	1	23	1008	1030	1008	1030	0.96

Sequence Information

Coding Sequence: ATGGAGACGAAACTGTGCCGGATATGCGGAAAGTCCGGCCAGAATTACGTGCACATCTTCAAAACCGACGGCTTGAAGAACAAAATCGAAACGTGCCTCCCCATTATCGTGTCGCCTCATTGTCTCCTGCCCGATACGATCTGCGGAGAATGTTCGGAGAACGTCGACAACTTCTACAGCTTCATCAAGAACTGCCTGCAGAACATCATAATACTGGAATCTCAATACGACATTACGGCCGAGTCCTGTCTGAAAACCAAACGAAAACACGACAAAAGCTGCCACACGGGCACGGATTTGATCACAATCCCGACAAACGACCGAGAAATCCAAACCGACGATTATTTGGACgtccttttgaaaaatttcgacctGTCCGAGGGGCCCTTTAAAGGCGACAACCCGAAACTGGTCGATTACGAGATCGAGTCGTCCTCGGATTACGAAGGCGAACCCTCGATCACGAACTGTCACAACAACTTCAATAGACGCTACTTCGACGATACAGAAAACTACCTTATCGACGAGATAGCGCAGCGGAAATGTCAAAGAAAGCGGCGAAATTGCGAGGAGATCCTCACGTCTCGCCCGAAGATATTCAAAATGGACAGGCGCAAAACTAAAATCCCTAAAAAGATCGAGCCGCCCCCGGAAGAGGTCAAATCCGAACCGATTTCGATCTGCGAAGAGGCGATTCTACCCCAAGTCTGTCTCTTGTGCGACGAACACTTTGCGGGGCCCTCGATGTTGGCGGCGCACGTTTTCGAGACCCACGGCATCGACATGGCGCAGATCGTGGCGGGAGAATTGGccgaaaagaagaagaagctgCCGGATTTGCTGAAAATATCCGATTTCAACCGGAAACTCACCCCAGATGACGTATGCGTGGTGCAAATGTCGGAGGACCCGCCTACGCTTTCGCCCAGTTTCGTGTGCTCCATATGCCCCGGAGTTTTCACCTCCCGCCCGGATCTGTTCACCCATTTCCGGATAAAGCACCCGGAAAGTTCGTCCCTCCTCTGCGGGATGTGTCTTTACCAAGCGAACACCTTGCAGAATTTGACAAGTCACGTCGATAACTGTTCAAAACAACACCCGATCGCTAATAGGTACATCTGTCAAATCTGTCGCTATGGTGATGACAGTTTAAAGAATCTAGAGAACCACGTTTTGGTCCACAATTTCCTGTTGGATGCGTGCCGGAAACAAGGGCGCATGTTCGACCCGGCCGATTACGTAGACGTCAACTTTGACATATGTCAATCGCCGACTGTCAAAACGCTGATTTGCGTCGAGTGCAGTCTGGACGATTTCGAGTCTTTCAAGGACTTTAGCGCCCATAGGCGTTCGCAACATTCCATTTTTCACTGCGATCTATGCAACAAATTCTATGGACGCAACAGTCATTTATGGAAACATGTCAATCGGCTGCACAAAGGTCACCCGAGTGTCACCTGTCAATTGTGCTACAAGACGAGCGCCTCGAAGTATCATTTGGCCCAACACTTCAATAAAATTCACAATAGTTCGAAACAACACGGTAACGGTAACGGCCGAAACGGCAAAGGCGATTTACCTTTTTGCGATGACGATGGTGCCAACTTCATGGCCCAAAAGTTCCAAGGTTTCGATTTTCAGTCGGTAAAACAGAGTTTCATGCGTCAGGAATTGTTGATGTCGGAACGTAACCACCACAAGATCGACAATTTCGACCGGGGCGAACTGGATGACAACTCCAATAACCGGCTGTCAGATCAGGAGATTTTGACAGTCGACAGCAACAGACCTCTGCCTAAAGAAATCGACTCTTCGAGCGACCTCTACACCAATATCATAACGAACTACACGCCACCTGTCAATGAGGGTGAGTTTAAGTGCCCGAAATGCGGTAAAGGGTTCCACAAGAAGACGCTGGtgaaaaagcacaaaaagAACTGCAGGCCCCGTCTGCAAAAAGACTTGTTGACCAGGTGCAAATCGTGCGCTCGTATCTTTAAAGATAGACAGAGTTTGGCTAAGCACTTGGTGAATTATCACTCGGAATACAATTGCGAAATTTGCAGACAGAAGGTGCAGAGTAAGTGCGAGATCGTTTCGCACATCCGGTTCGCGCATCCGGGCTGTCATTTGGTCTGTCAGACTTGCGGCAACATCCTGCGCAGTCGCGAGGACCTGTCCGAGCATCTCCGGGATCACGCGAACAGCTACGTCTGTCAGTTTTGCGGCGATTCCTTGCCCAGTAAGATCAAACTGAAGATGCACATCCTCAGTCTGCACCGTAAGATTTTGAGTCTCAGTTGCGGGATCTGTTTGAAACTGTTCGAAAGTCAACACGTTTTGAGGGATCACGTCAAATTGGTTCATAAAGAACAACTGGCGCCTTTGACGTCTTGCACCGTATGCGGTAAGAATTACGGCTCGAAATGGAAGACTTACGATCATTTGAATAAAAGCCACGGTCGCATTTTCCGCGCTTGTAAAATCTGTTTGGAGGTTTTCGACGATGACTGTCAGCTGTCACAACACGTTGACAGTTCGCATCCGAATAACGTCGCCATGGCGAAGAACAATCAAGCGCCGGTCGTCTTGGCAACGGTCAACAACAAAAGTGACAGCGATAAAGATAGTTCGGATTCGGAGTTTTTCGAAGAGGCCAGGAAAGAGGAGAGTTTCGTCAGGGCGGTCGCGTTTCCGGAAATGCGCGACGTAAACAAGTTTTCGTTGCTAGAGAGGCGGTTGCTAGGGAGGAAGGACGAGGAGGTCTCGCCCAATCCGCAGTCGAATAGCTCCAAGAGGACCGTTTACGTCAACAGTAACGATCCGTCATTTTGCGAGATCTGTCATAAGACTTGGCCGGCCAAGAAGCATCTATGGCAACACTACATCCGCTGTCATAAATCTGTCGCCGCTACAGTCTGCGGGATCTGTCTAAAAACCAATGACACTTACGAGATGTTGCAAGATCATCTGAAAATGACACATCCTAATCTTTTACATGGGCAAGGATTTGGGTCTAACTTCATATGTAGAATATGCGGGCGTTACCATAACGCCAGTTCGAAGTTGAAGTTGCACATGGCGATCCACGAGAACTTCGACTGGTCGCTGCTGGACGAGGCCGAGCGGAAAGAGCCGAACGGTTACCACggcgacgacgatgacgacaaCGACGGTGACGACgataacgacgacgacgatgacggtaACGATGACGACGACATAAACTACGAGAGTCTGATCGAGCAGGTCGAGTGCTCTTCGGCCGGTTCCGGCGGCGATTCGGACGAGGCGAAGTCGGACGAGTCGAGCAGCGAGGGCGCCTCGTGCGTTTCCGGTGACGTTCGGGTCGCTGCGGGGCGGCCGACGAGTGACGATCGTCAGAGCGATTACTCGTCCGAATCGTCgaacgatgacgacgatgacgatgacgataacGACGGTGACGATTTttctgtcaaaagtgacagctcGAAGTCGAGCGTTTACCGCACGAAGAGCGCCGAAATCGATTCGGCGGTGCAGTCGATTAAATACGAGtgcgacgatgacgatgacgttGAGGAGGGCGAGGATGATGACGGTGGgaacgatgacgatgatgatgacgatgacggcgGGGATTTTCTGCAATCGCAGGCGGCTCTGAACGAGACTGAAATCGAGTCGGCCGTGGGTTCCATACTGTAA
Protein Sequence: METKLCRICGKSGQNYVHIFKTDGLKNKIETCLPIIVSPHCLLPDTICGECSENVDNFYSFIKNCLQNIIILESQYDITAESCLKTKRKHDKSCHTGTDLITIPTNDREIQTDDYLDVLLKNFDLSEGPFKGDNPKLVDYEIESSSDYEGEPSITNCHNNFNRRYFDDTENYLIDEIAQRKCQRKRRNCEEILTSRPKIFKMDRRKTKIPKKIEPPPEEVKSEPISICEEAILPQVCLLCDEHFAGPSMLAAHVFETHGIDMAQIVAGELAEKKKKLPDLLKISDFNRKLTPDDVCVVQMSEDPPTLSPSFVCSICPGVFTSRPDLFTHFRIKHPESSSLLCGMCLYQANTLQNLTSHVDNCSKQHPIANRYICQICRYGDDSLKNLENHVLVHNFLLDACRKQGRMFDPADYVDVNFDICQSPTVKTLICVECSLDDFESFKDFSAHRRSQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSVTCQLCYKTSASKYHLAQHFNKIHNSSKQHGNGNGRNGKGDLPFCDDDGANFMAQKFQGFDFQSVKQSFMRQELLMSERNHHKIDNFDRGELDDNSNNRLSDQEILTVDSNRPLPKEIDSSSDLYTNIITNYTPPVNEGEFKCPKCGKGFHKKTLVKKHKKNCRPRLQKDLLTRCKSCARIFKDRQSLAKHLVNYHSEYNCEICRQKVQSKCEIVSHIRFAHPGCHLVCQTCGNILRSREDLSEHLRDHANSYVCQFCGDSLPSKIKLKMHILSLHRKILSLSCGICLKLFESQHVLRDHVKLVHKEQLAPLTSCTVCGKNYGSKWKTYDHLNKSHGRIFRACKICLEVFDDDCQLSQHVDSSHPNNVAMAKNNQAPVVLATVNNKSDSDKDSSDSEFFEEARKEESFVRAVAFPEMRDVNKFSLLERRLLGRKDEEVSPNPQSNSSKRTVYVNSNDPSFCEICHKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNDTYEMLQDHLKMTHPNLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWSLLDEAERKEPNGYHGDDDDDNDGDDDNDDDDDGNDDDDINYESLIEQVECSSAGSGGDSDEAKSDESSSEGASCVSGDVRVAAGRPTSDDRQSDYSSESSNDDDDDDDDNDGDDFSVKSDSSKSSVYRTKSAEIDSAVQSIKYECDDDDDVEEGEDDDGGNDDDDDDDDGGDFLQSQAALNETEIESAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -