Basic Information

Insect: Salpingus planirostris
Gene Symbol: ZIPIC
Assembly: GCA_949788335.1
Location: OX460920.1:4971915-4974923[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1 1.7e+02 2.9 0.2 2 23 7 28 6 28 0.92

2 15 0.0049 0.4 11.2 0.8 1 22 520 541 520 543 0.89

3 15 0.025 2 9.0 0.0 2 23 622 644 621 644 0.95

4 15 0.97 80 4.0 5.7 1 23 652 674 652 674 0.94

5 15 4.5e-05 0.0037 17.6 1.4 2 23 677 698 676 698 0.97

6 15 0.043 3.5 8.2 3.7 1 23 704 726 704 726 0.98

7 15 2.7e-05 0.0022 18.3 5.3 2 23 733 754 732 755 0.95

8 15 1.4 1.1e+02 3.5 3.9 5 23 768 786 767 786 0.95

9 15 7.5e-05 0.0061 16.9 3.4 2 23 792 814 791 814 0.96

10 15 0.017 1.4 9.5 0.0 2 23 830 850 829 850 0.96

11 15 0.0002 0.016 15.6 0.8 1 20 856 875 856 878 0.91

12 15 0.00014 0.011 16.1 0.2 1 23 886 908 886 908 0.99

13 15 0.0021 0.17 12.4 5.5 1 23 914 936 914 936 0.98

14 15 2.6e-06 0.00021 21.5 4.7 1 23 942 964 942 964 0.98

15 15 0.0011 0.087 13.3 7.3 1 23 970 992 970 993 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1	1.7e+02	2.9	0.2	2	23	7	28	6	28	0.92
2	15	0.0049	0.4	11.2	0.8	1	22	520	541	520	543	0.89
3	15	0.025	2	9.0	0.0	2	23	622	644	621	644	0.95
4	15	0.97	80	4.0	5.7	1	23	652	674	652	674	0.94
5	15	4.5e-05	0.0037	17.6	1.4	2	23	677	698	676	698	0.97
6	15	0.043	3.5	8.2	3.7	1	23	704	726	704	726	0.98
7	15	2.7e-05	0.0022	18.3	5.3	2	23	733	754	732	755	0.95
8	15	1.4	1.1e+02	3.5	3.9	5	23	768	786	767	786	0.95
9	15	7.5e-05	0.0061	16.9	3.4	2	23	792	814	791	814	0.96
10	15	0.017	1.4	9.5	0.0	2	23	830	850	829	850	0.96
11	15	0.0002	0.016	15.6	0.8	1	20	856	875	856	878	0.91
12	15	0.00014	0.011	16.1	0.2	1	23	886	908	886	908	0.99
13	15	0.0021	0.17	12.4	5.5	1	23	914	936	914	936	0.98
14	15	2.6e-06	0.00021	21.5	4.7	1	23	942	964	942	964	0.98
15	15	0.0011	0.087	13.3	7.3	1	23	970	992	970	993	0.96

Sequence Information

Coding Sequence: ATGGACCAGAACAACATCGTCTGTCCGGTTTGCACCCTGTACCTGCGGCCGGGGATCACCCTCAAGCACCACCTGAGCAGCCACCCGAAACAGAAGGTCATCGAGGCCCTGGTCCGCCTGGCCGAGACCGAGGAGGCGCCGACGAAAACCGGAAACGGCTCCTCACAGCCCGATCCGGTCAATTCGCAGGTGAACACCCAGATCGTCAACCAGACATGGAACCACCCCGGAAATCTGGTCAACATGCCCCCGAGCAACGTTCCCCCAATGCAGGGGAACCACGTGTTCATCTACCAGCAGAGCATGAGCAGCACCACCGCCCCCCAGCAGAACGTGCTCAACGTGAACCCGCTGGGCCAATACGTAATACCCACGGTTTTGAACCCGCACATGATGCCCTACGTCTATCAGCAACAGCAGGTTATCATGTCGAGTGGCACCTGCATTTCACCACCGATGCGCACCCTACCCTTTGAACTACCTCCACAAAGCATCACAGAAACCGAAGCACCTGAAGAAGAAGACCAGGAGAACCAACCCTTATCAATAACCGAGAAAGAAGAAGCGACTGTTGAAGAAATCTTCACATCGGATGATCAAGGTGAAGACGAGGTCAAGAAATCCGATCCGGATGATGAAGACAAGAAGCAGATCGAGGAAGAAGTCGAATTGAAGGATTACGAAGCTTCTGTAGAGATCGATGATGAAGAGGAAGATCCCTTCCCTGCTGAAGGTTATGGCGATTCTCCCCCTTCACCGACCGGTTCCGACTGGAGTCTCCGAGTGAGAACCGACTTGAACAAAGCGTGCCAGACCCAAAACAGCCAGGTCTTGTCTCCGAGGTCGCTGCTccaagacgacgacgacatcGGGGGCGACCTCGAGGACGACGAGGTCGAGCCCGAGACGATTTTAGAAACTGACGAATCGAAACTCTCGAAAAACGAGTCggaaaatttctatttcgtCGAAGAGGACAAGAACCAGACGTACACCTCGGTCGATTTGAACAATTACGAGCAGTCCGCCCCGATTTACGCCACCTCCAACGTTTTGCAGTCGGGGGATCACCTGGATTTCGTCGACATGGACGGGATGCACATAATCGGCGACTTCTCGACCAATCAGATCATTTCGCAAGTGGAGAACTTTGAAGGCAGCGCTCCTGACAGGCCGGGGGTGCTCATGACGATCGGGGGGATGGTCGACACGTCTTTGAAGGACGATTTCGTCGACCAGCGGGAGGAGAGCATGTCCCGGGAGAGCGCCAACATCAGGGCGGACGAGCGGATGCCCCCCAGGGGGGAGCTGTCAGGGCAGGAGAGCATAGGGGGCGCCAGCGACACCTGGAACCGCATCCATTATGAAGGCAGCTCAGGAATGTCAACTTCATATGACGTTTTAGTCCGGGACAGCTGGGAGGCTTCTGACAGTTCCGACTTGGACGTGCCGCCACCTTTACAAAGCCGAATTCCTCAGGATGTCGTCGGGTTCGATCGGGATGAGGACCAGGACGAAATTCCGACGATCGTCAGCTTTTCCGGGCCTCCACTCAACTTCAAGTGCTCAAGTTGCGGGGAAGCTTTTAAATCGTCGAAGGACCGTAAAGAGCACGAAGCAGAAAAGCACCCGGAAAAAGTCCAGAAAGTCAACCGGATCGGGACGGAAATCGGGAAGAAGAAGGTGAAGAAGCTCGTGGTCAAGTTGAAGCAAGACAAGACCGAGATGGAGCCGAATTTCGATAACGTCTTCACGAACAAACTGAAAATGGAGAGTCCTTTAGAAGCGGAAAGCGTCGTCGATCCTTTGGTTGATGATTTACCGAGGATCGAGGACAGTACTGTAGCTGTCAACTTGAAAGTCGTCTGCCCGATTTGTGATGTCGTTCTGATCAACACGAAAGCGTTGCGGGAGCACAAGTTGAGCGTCCACAACATCACGACGAAAACCCGGCACAAATGCATGATCTGCCACGAAGTCTTCCCGAACGATTACAAGTTTTCCGAGCACTGCCGCATCCACCCTTTGGAGTGTAAGCTGTGCGGTAAGCTGTTTTACAGGAGGCAGAACATCCAGTTGCACATGCGTAGGCATTTAGGGATCAGACCGTACAAATGCGAGTCCTGTGAGAAATGCTTCCTGACCAAGCAGAAGTTGGACGAACATAGGAACGTCCATACAGGTGAAGCTCCGATCAAGTGCACCCTGTGCGACGAGACTTTCCGGAGACACTCGAACTTGGTCCAGCACCGGAACCGTCACCATCTCAACGTGAAGAAAAAGGTGAGGGACTACATCTGTCACTGCAAGGAAGTGTTCCACTCGAAGAAGAAGTTGGCTTGGCACAAGGAGATCCACGACGACAAGCCGAAATCGTGCACCCAATGCAGCGAGAAGTTCATCCACATGTCGAGCCTGACCAGGCACATGCGGCGCGCCCACAACAACAGCTTTCTGCCGAAAGGGCACAAGAGTGCCGAAAATGTGGAATGTCCGATCTGCAAGGGTGTCTACTTGAAGTCTTCGCTCGAAGTTCACATCAGGAACCACAGCGGGCAGCGGCCCTACGCCTGCCTGATCTGCAACAAGGACTTCACGACCAAGTGGAACTTGAAGTTGCACAAGTGGACGCACGCTTCGAGGGTGTCGAAGCCGTTCAAGTGCGATCAATGCAAGGGCGCCTTCATCAGGGAGTCCGACTACGTGGCTCACATGAATTCGCACAAGAGCATCAGGCCGTACACGTGCAATCACTGCGGCGCCCAGTTCATCCGTAAGTACAACTGCCAGAGACATGTCAAGGAGCACGAGAATGCGAAGACGTTCAGTTGCAAGTCGTGCGGTAAGTCGTTCCATCGGTCCTACTATCTGAAGGACCACATGCGGATCCACAGCGGGATCCGGCCGTTCACCTGTCACATTTGCGGCAAGACTTCCACCACGAAATCGAATCACAATAAGCACGTGCAGATACATCACGCTCGCGAACCGGTCAGTACCGAAAATTGA
Protein Sequence: MDQNNIVCPVCTLYLRPGITLKHHLSSHPKQKVIEALVRLAETEEAPTKTGNGSSQPDPVNSQVNTQIVNQTWNHPGNLVNMPPSNVPPMQGNHVFIYQQSMSSTTAPQQNVLNVNPLGQYVIPTVLNPHMMPYVYQQQQVIMSSGTCISPPMRTLPFELPPQSITETEAPEEEDQENQPLSITEKEEATVEEIFTSDDQGEDEVKKSDPDDEDKKQIEEEVELKDYEASVEIDDEEEDPFPAEGYGDSPPSPTGSDWSLRVRTDLNKACQTQNSQVLSPRSLLQDDDDIGGDLEDDEVEPETILETDESKLSKNESENFYFVEEDKNQTYTSVDLNNYEQSAPIYATSNVLQSGDHLDFVDMDGMHIIGDFSTNQIISQVENFEGSAPDRPGVLMTIGGMVDTSLKDDFVDQREESMSRESANIRADERMPPRGELSGQESIGGASDTWNRIHYEGSSGMSTSYDVLVRDSWEASDSSDLDVPPPLQSRIPQDVVGFDRDEDQDEIPTIVSFSGPPLNFKCSSCGEAFKSSKDRKEHEAEKHPEKVQKVNRIGTEIGKKKVKKLVVKLKQDKTEMEPNFDNVFTNKLKMESPLEAESVVDPLVDDLPRIEDSTVAVNLKVVCPICDVVLINTKALREHKLSVHNITTKTRHKCMICHEVFPNDYKFSEHCRIHPLECKLCGKLFYRRQNIQLHMRRHLGIRPYKCESCEKCFLTKQKLDEHRNVHTGEAPIKCTLCDETFRRHSNLVQHRNRHHLNVKKKVRDYICHCKEVFHSKKKLAWHKEIHDDKPKSCTQCSEKFIHMSSLTRHMRRAHNNSFLPKGHKSAENVECPICKGVYLKSSLEVHIRNHSGQRPYACLICNKDFTTKWNLKLHKWTHASRVSKPFKCDQCKGAFIRESDYVAHMNSHKSIRPYTCNHCGAQFIRKYNCQRHVKEHENAKTFSCKSCGKSFHRSYYLKDHMRIHSGIRPFTCHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -