Basic Information

Insect: Salpingus planirostris
Gene Symbol: -
Assembly: GCA_949788335.1
Location: OX460927.1:3390679-3394941[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.3e-05 0.0011 19.3 1.1 2 23 182 204 182 204 0.96

2 21 0.72 59 4.4 3.7 1 21 323 343 323 344 0.92

3 21 0.024 2 9.0 5.2 1 23 373 396 373 396 0.92

4 21 0.43 35 5.1 0.1 6 19 407 420 404 423 0.92

5 21 0.35 29 5.4 0.4 1 21 429 449 429 452 0.89

6 21 0.0036 0.29 11.6 4.2 3 23 533 553 531 553 0.96

7 21 0.044 3.6 8.2 0.9 1 23 569 590 569 590 0.88

8 21 9.2e-05 0.0075 16.6 1.0 3 23 595 615 594 615 0.97

9 21 0.00015 0.013 15.9 0.6 2 23 645 666 644 666 0.97

10 21 0.33 27 5.4 1.1 1 23 682 705 682 705 0.97

11 21 4.5 3.7e+02 1.9 0.4 2 19 719 736 718 740 0.70

12 21 0.0001 0.0082 16.5 3.7 1 23 775 797 775 797 0.98

13 21 0.0053 0.44 11.1 1.5 3 23 818 839 818 839 0.91

14 21 5.6e-06 0.00046 20.5 2.3 1 23 862 884 862 884 0.98

15 21 0.013 1.1 9.9 3.1 3 23 904 925 903 925 0.96

16 21 0.096 7.8 7.1 1.4 2 23 943 964 942 964 0.93

17 21 0.021 1.7 9.2 0.1 1 23 1001 1024 1001 1024 0.95

18 21 0.42 34 5.1 3.3 2 23 1035 1056 1035 1056 0.95

19 21 0.0048 0.39 11.2 0.3 1 23 1066 1089 1066 1089 0.96

20 21 5.3e-06 0.00043 20.5 2.5 1 23 1101 1123 1101 1123 0.98

21 21 0.0023 0.19 12.2 0.1 1 23 1157 1180 1157 1180 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.3e-05	0.0011	19.3	1.1	2	23	182	204	182	204	0.96
2	21	0.72	59	4.4	3.7	1	21	323	343	323	344	0.92
3	21	0.024	2	9.0	5.2	1	23	373	396	373	396	0.92
4	21	0.43	35	5.1	0.1	6	19	407	420	404	423	0.92
5	21	0.35	29	5.4	0.4	1	21	429	449	429	452	0.89
6	21	0.0036	0.29	11.6	4.2	3	23	533	553	531	553	0.96
7	21	0.044	3.6	8.2	0.9	1	23	569	590	569	590	0.88
8	21	9.2e-05	0.0075	16.6	1.0	3	23	595	615	594	615	0.97
9	21	0.00015	0.013	15.9	0.6	2	23	645	666	644	666	0.97
10	21	0.33	27	5.4	1.1	1	23	682	705	682	705	0.97
11	21	4.5	3.7e+02	1.9	0.4	2	19	719	736	718	740	0.70
12	21	0.0001	0.0082	16.5	3.7	1	23	775	797	775	797	0.98
13	21	0.0053	0.44	11.1	1.5	3	23	818	839	818	839	0.91
14	21	5.6e-06	0.00046	20.5	2.3	1	23	862	884	862	884	0.98
15	21	0.013	1.1	9.9	3.1	3	23	904	925	903	925	0.96
16	21	0.096	7.8	7.1	1.4	2	23	943	964	942	964	0.93
17	21	0.021	1.7	9.2	0.1	1	23	1001	1024	1001	1024	0.95
18	21	0.42	34	5.1	3.3	2	23	1035	1056	1035	1056	0.95
19	21	0.0048	0.39	11.2	0.3	1	23	1066	1089	1066	1089	0.96
20	21	5.3e-06	0.00043	20.5	2.5	1	23	1101	1123	1101	1123	0.98
21	21	0.0023	0.19	12.2	0.1	1	23	1157	1180	1157	1180	0.94

Sequence Information

Coding Sequence: ATGGGCAGCCACAATTTCAGCCAGTGCTGCAGGCTCTGCCTGACCGACAAAGTGGAATCCGCCAAGTCGATCTTCGACGATGCCGCAAAGGATCGCGCCTTGTCCCAGAAGATTTCCGCCTCGCTGTCGATAGAGATATGTGCCGAGGATCGATTGTCGACGATCGTGTGCGATCCGTGCATGAAAAAGGTCGACGATTGGTATGCCTACAAGAAGCGCTGTTGCAGCAACCAGCTGAAATTGGAACAATGGCTGCAGCAATCCACCAGTTCCGATCTGCACCATATGAGTATACAAATCAAGGAGGAACCGGTGGAAGTGGTGGATGTGTCTGGTGAAATCGTTACGAACGGTGCCTCATCGGTACCCGTGAAAACGGAAACTTCGGTCGATGAGGAATTCAACGACTTGCCGCCTCCTTTGACGCCGCAAGCCGGAAATGATGACGTCGACCACGAAGAGATCTCTGCTCCTTCCGCTACCCCTTCACCGAAACCGGGCTACAAACGTAGACGTCGGACgttttttgATGATACCGGTAATAGGTGTAAAATTTGCGACAAGTCATTTAGTAGGGCGGCAAATCGTAGAAAACACGAACTGACTATTCACGGAATCAATCCCGGCAAAATAAGCTCGGCATCTTTGGGTAAtgaaaatcaggaaaaatcTCGAAGCAATGCGAATTCTCAAAGCCTAGTGGAAGCTTCATCATCCACAACGCGTCCATCGAATAACGACCAACAAAAAATCCTATTCGCTGCCGGATTGAAATTGCTCCAAAAGAAATCGAGTCCGCCGATATCGCAGGAGCCCATATCTAAAATCGAAATCAGTTACGTAGCAAAATGCAAAGCGATGGCTTCGATGTACCGCACGCTGGTTTGCGCCTGCCACAAAATCCAACACAACAGCGTCAAAGGATTACTGAATCATTTACGATTCCTACGGATCTGGTTCCCTTCGTACACGTGCTACCATTGCATGACCACGTTCTCGAACAAATCGGATAGCAGCAAACATTACAACCGATGCCGCAAAGGCGATCTGGAAACTCTTACGCAATTATCGAACTTGAAGAGAAGGACCGAAGTGAAAACGAGACTTTACCAGAATTACAAGTGCACAGACTGCGGGCACATGTACAGTTTCCACGAAGATTTCTGCACTCACGTCGATGAAGTGCACTGCGATGTCAACTTACCGATCAAGTGTAGATGCGGAAGGGTTTTCAGTAAATTGGAAGATTATAAAGATCACGCTTATATCAGTTGTTTGGTTGAATATTACTGCGATGTATGTTTTGTCACCGTAAAGACTCTAAACGGGTTCCGTAAACACGGGGCGGAAAACCACGATAATTCCGAAGGATTCGCCCTACTCCAGGATGATAACTATAAGCGGAAACGGTCGTCTGTTAACGCCACACCAGTGGCGCCTCCTAAAGCGATCAAACAGGAAGCGGAGGAAGATGTCGGAATGGCACGAAGAAGACGCAGGAGCACTTACAGGCAGCCGATCCTCGAACCGGCAGAAGAAAAATTAGAGGCCAAAGTGATTAATCCATGCGTGGTTCCCAGAGTACCGGGCACCTGCTGCCCTCTGTGCTCCCGGAACTATTCCTCCAACAACAACATGTATCGACACTACAAAACCCATTTCGAGGAGCAAGAGACGGACGATCAAGAGCAGGACAATTCGCTTTACTGCTGTCCGGATTGTGGAGGCATGTTCACGACGGCCGAATGGGAGAAGCACAAGGAGAAGCACAAGCGCAAGGCGTGCCATGAATGCGGCAAGGTGTTCCAGTTCCAGTCCGAGCTGGATCAACACAGGAGCGtccatttaaatttgaaagtCTACCGCGACTCCAAGACCAAAGCGTACAAGAGCACGATGGTGAGCCCGAACGGCGAGACCAATCGCGTTGTCTCTTGTGACGTTTGCAACACGATGTTCACCTCGATCCGCCAACTGGAAGAGCACAAGCGCACCCACGAACAGGTGGCTCAAGGGCCGGGTAGTGGGCAGACGCTCAGGACGTTCACTTGCAGGATCTGCTTCGTCCCGTTCTTCGGGTACCACGCGCTGTACGAGCACAGGAAGGTCGCGCATCCCGAAGCTCTGGTCCGGATCAAGAAGGACTTCCCGATGAAGTGCCCGCATTGCGACCTCATCATAACCTCGGCCGGGATTTTCTACACGCACAACCTGAAGCATCTGAGGCAGAACGCGAAAGAGGCGAAAGTGATCGCGGATTACGTGCCCGAAGAGCAGAGTCCGGAAGACGATTTCAACGATAATGACGAGTCCGAATCTTACCACACATGTAAACGCTGCTTTAAAGTCTTCTCCACAAAGGTCGGCTTAAGGGGGCACATGAAGAGCCACGGGGGTAAACGTCCTTCGCCTAGTAAACCGGTCAAGTCGAAGAATATGAAGAAGATTTGGTGCGAAACTTGTCACTTGTCTTTCGATAACAACGAGCAACTACAACAACATAAAGATGAAGAGCATTATTCTGATGATCAAATGCCTGAACTGACTGATGAAAGGGAGCACGATATTAAAGCCCCCTACGTTTTCACTTGTAATGTATGCGTCAAGACCTTTACCTCGAAAGGGTCGCTCAAGAGGCATAAAATAAAGCACGCTGAAGAAAAAGCCGGGATTTTGAAGGCGGCCGGCATGAAGCAGACTCTGGTGTTTTGTAAACACTGCAAGGTCTCTTTCACGAGTACGCAGAAATTGGATGAACACATGAAAGAGGAGCACATGGAAAAGAAGGAGTCGCCTAAGAACAAGGGTAACAAAGACGGCAAAACGACTTGCAAAATCTGCAGGAAGGTGTGCAAATCGGTATTTTCCATGTACGCTCATATTGGGTGGCACAAAAGGATCAGCAATAGAAAGATGAAAGAAAACGAAATCAACGAATCGGAAGAGGAGCAAGCACCTCCTCCTACTCCAAAGGTCGAGCCGAAGGCGCCTCGAGAGGAATTCCGGTGCGGTAAATGCAGGGCGGTTTTACCTAACAACACGGCGCTGCAAATTCACATTCTGGAAAAGCATCGAAATGTCAACGCGATCGCTTTGTTGGCGCGTTGCAGTTCTTGCAAGTTGGATTTCAGTTCGCAGCAGGAGTACGAACAGCATAAGCATCTTCACAGTTTGGTGGAGAGTCCGAAGAAAAATTATCCCTGTAAAAGTTGTCCTGCTGCTTTCGGTAAGCAGGAGACTTTGAACACGCATGTTAAGCAGTTCCACAGGCCATCGCCAGTCGTGGTGAATCAGAACGAATTTCGGTGTCACCAATGCGATCGCGTTTTCGATAAGCAGAGCTCGTTGAGTATCCATTTGAAAGTGCACGAGAAGCAGAAATTGATCAACGGGGGTGGCGGTGGTAGTGTCGGTAACGTCGGTAATGTCGGTaatgtcggtaatgcaggtgGTAATAATAAGACGTTGTACTCTTGTTCGATTTGTAATGCCGGTTTTAATCTGCCGAAAGATCTGAGGACGCATACGATACAGGCCCACCCTTTCTGA
Protein Sequence: MGSHNFSQCCRLCLTDKVESAKSIFDDAAKDRALSQKISASLSIEICAEDRLSTIVCDPCMKKVDDWYAYKKRCCSNQLKLEQWLQQSTSSDLHHMSIQIKEEPVEVVDVSGEIVTNGASSVPVKTETSVDEEFNDLPPPLTPQAGNDDVDHEEISAPSATPSPKPGYKRRRRTFFDDTGNRCKICDKSFSRAANRRKHELTIHGINPGKISSASLGNENQEKSRSNANSQSLVEASSSTTRPSNNDQQKILFAAGLKLLQKKSSPPISQEPISKIEISYVAKCKAMASMYRTLVCACHKIQHNSVKGLLNHLRFLRIWFPSYTCYHCMTTFSNKSDSSKHYNRCRKGDLETLTQLSNLKRRTEVKTRLYQNYKCTDCGHMYSFHEDFCTHVDEVHCDVNLPIKCRCGRVFSKLEDYKDHAYISCLVEYYCDVCFVTVKTLNGFRKHGAENHDNSEGFALLQDDNYKRKRSSVNATPVAPPKAIKQEAEEDVGMARRRRRSTYRQPILEPAEEKLEAKVINPCVVPRVPGTCCPLCSRNYSSNNNMYRHYKTHFEEQETDDQEQDNSLYCCPDCGGMFTTAEWEKHKEKHKRKACHECGKVFQFQSELDQHRSVHLNLKVYRDSKTKAYKSTMVSPNGETNRVVSCDVCNTMFTSIRQLEEHKRTHEQVAQGPGSGQTLRTFTCRICFVPFFGYHALYEHRKVAHPEALVRIKKDFPMKCPHCDLIITSAGIFYTHNLKHLRQNAKEAKVIADYVPEEQSPEDDFNDNDESESYHTCKRCFKVFSTKVGLRGHMKSHGGKRPSPSKPVKSKNMKKIWCETCHLSFDNNEQLQQHKDEEHYSDDQMPELTDEREHDIKAPYVFTCNVCVKTFTSKGSLKRHKIKHAEEKAGILKAAGMKQTLVFCKHCKVSFTSTQKLDEHMKEEHMEKKESPKNKGNKDGKTTCKICRKVCKSVFSMYAHIGWHKRISNRKMKENEINESEEEQAPPPTPKVEPKAPREEFRCGKCRAVLPNNTALQIHILEKHRNVNAIALLARCSSCKLDFSSQQEYEQHKHLHSLVESPKKNYPCKSCPAAFGKQETLNTHVKQFHRPSPVVVNQNEFRCHQCDRVFDKQSSLSIHLKVHEKQKLINGGGGGSVGNVGNVGNVGNAGGNNKTLYSCSICNAGFNLPKDLRTHTIQAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -