Basic Information

Insect: Salpingus planirostris
Gene Symbol: -
Assembly: GCA_949788335.1
Location: OX460928.1:4300495-4304221[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.1 8.2 7.1 2.5 2 23 173 196 172 196 0.90

2 18 0.37 30 5.3 1.0 1 23 202 223 202 223 0.86

3 18 0.094 7.7 7.2 0.3 1 23 229 251 229 251 0.97

4 18 7e-05 0.0058 17.0 1.9 1 23 257 280 257 280 0.95

5 18 0.00011 0.0091 16.4 0.9 1 23 312 334 312 334 0.98

6 18 3.8e-05 0.0031 17.8 3.2 1 23 357 379 357 379 0.97

7 18 0.0034 0.28 11.7 0.9 1 23 384 406 384 406 0.95

8 18 0.033 2.7 8.6 4.1 2 23 594 617 593 617 0.90

9 18 0.031 2.6 8.7 1.0 1 23 623 644 623 644 0.91

10 18 0.0015 0.12 12.9 0.0 1 23 650 672 650 672 0.98

11 18 0.00035 0.029 14.8 0.4 1 23 678 701 678 701 0.96

12 18 7.8e-05 0.0064 16.9 1.4 1 23 731 753 731 753 0.98

13 18 2.2e-05 0.0018 18.6 0.7 1 23 776 798 776 798 0.98

14 18 0.0002 0.017 15.6 0.2 1 23 803 825 803 825 0.96

15 18 3.4e-06 0.00028 21.2 2.3 1 23 831 853 831 853 0.98

16 18 9.3e-07 7.6e-05 22.9 2.7 1 23 859 881 859 881 0.99

17 18 1.6e-07 1.3e-05 25.3 1.8 1 23 887 909 887 909 0.99

18 18 7.6e-06 0.00062 20.0 3.5 1 23 915 938 915 938 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.1	8.2	7.1	2.5	2	23	173	196	172	196	0.90
2	18	0.37	30	5.3	1.0	1	23	202	223	202	223	0.86
3	18	0.094	7.7	7.2	0.3	1	23	229	251	229	251	0.97
4	18	7e-05	0.0058	17.0	1.9	1	23	257	280	257	280	0.95
5	18	0.00011	0.0091	16.4	0.9	1	23	312	334	312	334	0.98
6	18	3.8e-05	0.0031	17.8	3.2	1	23	357	379	357	379	0.97
7	18	0.0034	0.28	11.7	0.9	1	23	384	406	384	406	0.95
8	18	0.033	2.7	8.6	4.1	2	23	594	617	593	617	0.90
9	18	0.031	2.6	8.7	1.0	1	23	623	644	623	644	0.91
10	18	0.0015	0.12	12.9	0.0	1	23	650	672	650	672	0.98
11	18	0.00035	0.029	14.8	0.4	1	23	678	701	678	701	0.96
12	18	7.8e-05	0.0064	16.9	1.4	1	23	731	753	731	753	0.98
13	18	2.2e-05	0.0018	18.6	0.7	1	23	776	798	776	798	0.98
14	18	0.0002	0.017	15.6	0.2	1	23	803	825	803	825	0.96
15	18	3.4e-06	0.00028	21.2	2.3	1	23	831	853	831	853	0.98
16	18	9.3e-07	7.6e-05	22.9	2.7	1	23	859	881	859	881	0.99
17	18	1.6e-07	1.3e-05	25.3	1.8	1	23	887	909	887	909	0.99
18	18	7.6e-06	0.00062	20.0	3.5	1	23	915	938	915	938	0.97

Sequence Information

Coding Sequence: ATGAATTACCACAAAGGCCAAATGGAAAAGACGCCCGTGAGAGACATCAGTGAAATCTGCAGGACATGTCTTGGAGCCCCATTGAATGTGCACAACATCAACGATACAGCACTGAATGGTGTCAAGATCATCACTTTGCTCGAGTCCCTGTGCGAAATCAAAATCGAAGATCCCGATAGACTCCCGCAAAACATGTGCATCGTTTGCATCACGGCACTCCACACCAGTTACAGGTTCAAACGCCAATGCTTGGATAACGACGCCGCCCTCAAATCATTAATACAAGAAGCAGACAAAGTCACCGAAAATCAATTCAATGGAATCGAAACTTGCGCAAAAGATGACGGTGAGTCGTTATCTTCAGAAGAAGCAACACCTTGTGCAATTCAATCAACTGAAAacagtgatgatgatgacaccGATTACTTTGAAAGAGAAAATGAAAACGTACCTAAAAAATCTGATGAGGTAGCAAAGCCGCCAGAATCCTCAACCCTGTTTAGGTCAAAGATTATCCATTGTACCCAGTGCCTGGAGCGGTTCGAAACTAAAGAGATGCTGTTGGAGCACAGAAAGAAAACGAAACACGGAAACGTGAGAAAATATCCGTGCGAAATTTGCGCCAAAATGTTTGCAAAATGCAGAATGAGAGAGCACATGATCTCCCACACTAAAGAGAAGCTGTACCAGTGCGAAATATGCGCCTCGCTTATCAGTTCGTATGCCAATTTtaggagacacctcaagggGCACGCGGGAGAGCGCCCTTTCGTTTGTCACGTATGCGGCGCCCGTTTCACTCAAAAAACTTCTTTGGTGAGTCACAAAAAGGCGTTTCACGGCATCGGCCTGGCCGAGGGCGAAAACCCGCGCAGACCGAGAAGAATCCGCAGATACACGAAGGCAAAGAGTGATGAAATCgccaccgataaattcacTTGTGAGGTGTGCGGCAGAcatttcaaagtggcgaacGCTTATAAGGCACACTTGGACAAACACAGTAAGGATCGCGATTTGCCGGAGAGTCTCTCCTATTCCGATCCTTCTTACTGCAAAGGTCGCGATTTCGTTTGCGAGGTGTGCTTGAAAAGATTCAAAAAGAGTTATGATCTGAGAAAGCACCAAAAATTTCACGAGGCGAAAAACTACTTGTGTTCAGAATGCGGGATGAGTTTCCATTCGAATAGGGCGCTCGACGGCCATTTTCGGGTGCATAGCGGCGTGAAGCCGTTCGCTTGTACCATTTGCGAAAAgaataaatcGATTCAAATTGTCCTTGGCCAAATGGAAACTACGCCTGTGAGAGACCTCAAAGAAATCTGCAGGACGTGTCTCGGAGTCTCGAATGTGCACAACGTCAACATTACAGGAATAAATGGTGTCAAGATCATCACTTTGCTCGAGTCCCTGTGCGAAATCAAAATCGAAGATCCCGATAGACTCCCGCAAAACATGTGCATGGTTTGCATCACGGAACTCCACAACAGTTACAAATTCAAACGCCAGTCCCTGGATAACGACGCCGCCCTCAAATCATTGATACAAGAAGCGGACAAAGTCGCCGAAAATCAATTCAATGCAATCGAAACTTACGCAGAAGATGACGGTGACTCGTTATCTGCAAAAGAAGCGACACCTCGTGCAACTCAATCAACTGGAAacagtgatgatgatgacaccGATTACTTTGAAAGAGAAAATGAAAACGTACCTAAAAAGTCTGATGAGGTAGCGAAACCGCCAGAATCCTCGACCCTGTTTAGGTCAAAGATTATTCATTGTACCCAGTGCCTGGAGCGGTTCAAAACGAGAGAGATGCTGTTGAAGCACAGAAAGAAGACGAAACACGGAAACGTGAGAAAATACCCATGCGAAATTTGCAACAAATTGTTTACAACATACAGAATGAGAGAACATATGACGTCGCACACTAAAGAGAGGCTGTACCAGTGCGAAATATGCGCCATGCCTTTGAGTACGCCCACTAATGTCAAAAGACACGCCATGATGCACACGGGGGAGCGCCCCCACGTTTGCGACTTATGCGGGGCCGGTTTCATCCAAAACTATTCTCTGGTCAACCACAAAAAGGTGCGTCACGGCGTCGGGTTGGCCGAGGGCGAATCGCCACGGCAACCGAGGAGGCCCCGCAGAGTCAAGGAGGCCGGCACGAAGACAAGTGATGAATTCACTTGCGATTTGTGCGGTAGatgtttcaaagtggcgaaCGCTTATAAGGCGCATTTGGACAAACACAGTAAAAATGGCGATTTGCCTGAAAGCGTCGCCTCTTCCGATCCGTCTTACTGCAAGGGTCGCGATTTCGTTTGCGAGGTGTGCTCGAGGAGATTCAAATCTCTGGTCTCACTGAGGTGGCACCGAAAGATACACGGAGAGAAAAACTACTTGTGTTCCGAATGCGGGCTGAGTTTCTATGCGAAGGGGTCGCTCGACAATCATCTTCGGGTGCATAGCGACGAGAAGCCGTTCACTTGTACCGATTGCGGAAAGTCCTACAGCCACAGTTCGCGTTTGAAAATCCATGAAAACATCCATTCCGGGCTTAGGCCGTACAAGTGTAAATATTGTTCGAAATCTTTTGTAGAACCGAATCATTTGACACGTCATTTGATGGTTCATAGTGGTGAGAGACCGTACAAGTGCTCGTTCTGTGAGAAAAGTTTCGCTcagaattcaaatttcaagGCGCACCTTCGAATTCATACAGGGGAGACCCCGTATTCATGTACTATCTGTACGAAACAGTTTAATAATTCGAGTGCTCTGAAGAAGCACAAAAAACGTTATCATGAAAAGAATGAAATTGATTTAGGATGTTCAATTGAAGAAGAATCTGTTGAGTTATCGTCGCTTTAA
Protein Sequence: MNYHKGQMEKTPVRDISEICRTCLGAPLNVHNINDTALNGVKIITLLESLCEIKIEDPDRLPQNMCIVCITALHTSYRFKRQCLDNDAALKSLIQEADKVTENQFNGIETCAKDDGESLSSEEATPCAIQSTENSDDDDTDYFERENENVPKKSDEVAKPPESSTLFRSKIIHCTQCLERFETKEMLLEHRKKTKHGNVRKYPCEICAKMFAKCRMREHMISHTKEKLYQCEICASLISSYANFRRHLKGHAGERPFVCHVCGARFTQKTSLVSHKKAFHGIGLAEGENPRRPRRIRRYTKAKSDEIATDKFTCEVCGRHFKVANAYKAHLDKHSKDRDLPESLSYSDPSYCKGRDFVCEVCLKRFKKSYDLRKHQKFHEAKNYLCSECGMSFHSNRALDGHFRVHSGVKPFACTICEKNKSIQIVLGQMETTPVRDLKEICRTCLGVSNVHNVNITGINGVKIITLLESLCEIKIEDPDRLPQNMCMVCITELHNSYKFKRQSLDNDAALKSLIQEADKVAENQFNAIETYAEDDGDSLSAKEATPRATQSTGNSDDDDTDYFERENENVPKKSDEVAKPPESSTLFRSKIIHCTQCLERFKTREMLLKHRKKTKHGNVRKYPCEICNKLFTTYRMREHMTSHTKERLYQCEICAMPLSTPTNVKRHAMMHTGERPHVCDLCGAGFIQNYSLVNHKKVRHGVGLAEGESPRQPRRPRRVKEAGTKTSDEFTCDLCGRCFKVANAYKAHLDKHSKNGDLPESVASSDPSYCKGRDFVCEVCSRRFKSLVSLRWHRKIHGEKNYLCSECGLSFYAKGSLDNHLRVHSDEKPFTCTDCGKSYSHSSRLKIHENIHSGLRPYKCKYCSKSFVEPNHLTRHLMVHSGERPYKCSFCEKSFAQNSNFKAHLRIHTGETPYSCTICTKQFNNSSALKKHKKRYHEKNEIDLGCSIEEESVELSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -