Basic Information

Insect: Salpingus planirostris
Gene Symbol: -
Assembly: GCA_949788335.1
Location: OX460922.1:8060351-8061940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.3e-05 0.0019 18.5 0.2 1 23 60 82 60 82 0.97

2 14 6.4e-06 0.00052 20.3 1.6 1 23 88 111 88 111 0.95

3 14 6.9 5.7e+02 1.3 0.0 14 23 121 130 116 130 0.87

4 14 2.3e-06 0.00019 21.7 1.8 3 23 138 158 138 158 0.99

5 14 0.00047 0.039 14.4 2.9 1 23 164 186 164 186 0.98

6 14 4.9e-08 4.1e-06 26.9 4.3 1 23 192 214 192 214 0.99

7 14 0.00077 0.063 13.7 0.8 1 23 220 243 220 243 0.94

8 14 2.3e-05 0.0019 18.5 0.6 1 23 268 290 268 290 0.98

9 14 9e-07 7.4e-05 23.0 5.4 1 23 296 318 296 318 0.99

10 14 1.2e-07 9.7e-06 25.7 3.8 1 23 324 346 324 346 0.98

11 14 0.0005 0.041 14.3 1.6 1 23 352 374 352 374 0.98

12 14 3.6e-05 0.003 17.9 0.1 3 23 423 443 421 443 0.98

13 14 1.5e-07 1.2e-05 25.4 1.6 1 23 449 471 449 471 0.99

14 14 2.4e-07 1.9e-05 24.8 1.3 1 23 477 499 477 499 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.3e-05	0.0019	18.5	0.2	1	23	60	82	60	82	0.97
2	14	6.4e-06	0.00052	20.3	1.6	1	23	88	111	88	111	0.95
3	14	6.9	5.7e+02	1.3	0.0	14	23	121	130	116	130	0.87
4	14	2.3e-06	0.00019	21.7	1.8	3	23	138	158	138	158	0.99
5	14	0.00047	0.039	14.4	2.9	1	23	164	186	164	186	0.98
6	14	4.9e-08	4.1e-06	26.9	4.3	1	23	192	214	192	214	0.99
7	14	0.00077	0.063	13.7	0.8	1	23	220	243	220	243	0.94
8	14	2.3e-05	0.0019	18.5	0.6	1	23	268	290	268	290	0.98
9	14	9e-07	7.4e-05	23.0	5.4	1	23	296	318	296	318	0.99
10	14	1.2e-07	9.7e-06	25.7	3.8	1	23	324	346	324	346	0.98
11	14	0.0005	0.041	14.3	1.6	1	23	352	374	352	374	0.98
12	14	3.6e-05	0.003	17.9	0.1	3	23	423	443	421	443	0.98
13	14	1.5e-07	1.2e-05	25.4	1.6	1	23	449	471	449	471	0.99
14	14	2.4e-07	1.9e-05	24.8	1.3	1	23	477	499	477	499	0.98

Sequence Information

Coding Sequence: ATGATACTAGAGGTGAAGGAGAACACGATAGAAACCGAATATGATCAGGATGTCGAGGAAAGTGACAGTGATCAAGAACCTGAGGTACAGTTGTTCGATTTCAAATCTCGCGACGAAATCTCCAAAGTGGAAGAAGCGTCAACGAAGGAACAGATCATTATAGTCGCCGAGGAACTATTCAAGTGCGAAATGTGCGTCGAGAGATTCACCGACAAACGCGATTTAGTCGTCCACATGGAAGAGCACGCGAACGTACGCCCGCACATCTGCCAAATCTGCGGCAAGAGTTTCGTCCAAGGGACGTCGCTGAGGAAACACCAATTGAGTCGGCATTCGGATAAAAATGTCGTCGAGACAGACTCGGCCCTCGCCGACCACATGTCGACACACGGAGAATCCGGGAATTTGTGGTGCGACCAGTGCGGTAAGGGTTACAAGAACAAATCGACGTTGAAAATGCACATGAAGTCTCATTCCGGAGAAGAGCCTTATCGGTGCGACGTCTGCAATAAGGAGTTCCACATAAAGCGCCATCTGGAGATCCACGCGAAAATCCACACGGGGGAGAGGCCCTACCAGTGCACCCTGTGCGACAAAACGTTCAGCCAGTCGGCGCATTTGACGACCCACAGGAGGACCCACACCGGGGAGAAGCCGTACAAGTGCGGCTTCTGTCCCAAGTCTTTCGCCGTGACCAGCAATCGGAGGACCCACGAAAAGGCGATGCATTCCGGGATGACGCGAGCGAAATGTCCGCGAATCAGAAAGCAGATGAGTGCTGAAAACTCGGATAAGAAGACGTACGTTTGCGAGATTTGCGGCAAACACTTTGGCCAGTTGGGGAGCTTCCGGATCCACAAGTTGGTCCATTCGGGGGTCAAGCCCTACCAGTGCAAGTTGTGCAACAAGCGGTTTCGGCAACAGAGCCACCTGAGTGTGCACACCAAGATGCACAGTTCCGAAAGGCCGCACACTTGCGAATTTTGCGGTAAACGGTTTAAGGTTAAGAGCAATTTGAGGGTGCATTTGCGTACTCACACCGGGGAGAAACCGTTCGAATGCCTGGTTTGCTTGAGGAAGTTCAGGGATTTGAACAATATGAGGAGGCATAAAGAGACCCATGTGAAACAGGAAGCGATGGAGGGTTGCGGAGAGTTTGGAGATTTTCCCAAGGGGATCGTGATCGGGACGGAAAACGATCAAGAGCCGATCGTTTGCGAGATCAGGGTGTTGAAAGATGGCGAATTGGCCAGCAAACCGTACGGCTGTTCGGTCTGCGGCAAGTACTTTCCGCAGTACAGGGACGTGACGGTCCACATGCGGGTCCACACGGGGGAGAGGCCGTACAAGTGCGAATTTTGCGGCAAGTCTTTTGCGGCCAAGAGCAATTTCAGGGTGCACTTGAGACGCCATAACGGCGAGACGAGATTTTCCTGTAAACTTTGCGATAAACCGTTTTACGAGTCGAGCGGGCTGACCAGGCACATGAAGACCCACAACAGGAAGCTCAGATACGAACTGGAAAACGAAGACACGGTAGAGAAAATCGAGGTGATATGCGAAGATAATGTGGTAGAAGATGAGGGTTga
Protein Sequence: MILEVKENTIETEYDQDVEESDSDQEPEVQLFDFKSRDEISKVEEASTKEQIIIVAEELFKCEMCVERFTDKRDLVVHMEEHANVRPHICQICGKSFVQGTSLRKHQLSRHSDKNVVETDSALADHMSTHGESGNLWCDQCGKGYKNKSTLKMHMKSHSGEEPYRCDVCNKEFHIKRHLEIHAKIHTGERPYQCTLCDKTFSQSAHLTTHRRTHTGEKPYKCGFCPKSFAVTSNRRTHEKAMHSGMTRAKCPRIRKQMSAENSDKKTYVCEICGKHFGQLGSFRIHKLVHSGVKPYQCKLCNKRFRQQSHLSVHTKMHSSERPHTCEFCGKRFKVKSNLRVHLRTHTGEKPFECLVCLRKFRDLNNMRRHKETHVKQEAMEGCGEFGDFPKGIVIGTENDQEPIVCEIRVLKDGELASKPYGCSVCGKYFPQYRDVTVHMRVHTGERPYKCEFCGKSFAAKSNFRVHLRRHNGETRFSCKLCDKPFYESSGLTRHMKTHNRKLRYELENEDTVEKIEVICEDNVVEDEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -