Spla003174.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Salpingus planirostris
Gene Symbol
ZFY
Assembly
GCA_949788335.1
Location
OX460918.1:6223185-6228949[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.032 2.6 8.7 1.6 1 23 12 34 12 34 0.89
2 28 0.00019 0.015 15.7 3.4 1 23 40 63 40 63 0.98
3 28 0.00023 0.019 15.4 2.7 1 23 75 98 75 98 0.93
4 28 0.0021 0.18 12.3 0.5 3 23 109 129 108 129 0.98
5 28 6.3e-07 5.1e-05 23.5 1.1 1 23 135 157 135 157 0.98
6 28 1.3e-05 0.0011 19.3 0.7 2 23 190 211 190 211 0.97
7 28 0.00015 0.012 16.0 0.8 1 23 215 237 215 237 0.98
8 28 0.00048 0.039 14.4 1.2 1 23 272 294 272 294 0.97
9 28 0.0045 0.37 11.3 1.9 1 23 300 323 300 323 0.97
10 28 0.023 1.9 9.1 3.0 1 23 334 356 334 356 0.96
11 28 0.59 49 4.6 2.0 3 23 363 389 362 389 0.56
12 28 0.81 66 4.2 0.0 1 22 409 430 409 432 0.89
13 28 0.017 1.4 9.5 2.1 1 23 436 458 436 458 0.92
14 28 0.026 2.1 8.9 0.4 2 23 465 487 464 487 0.95
15 28 0.00069 0.056 13.9 0.1 1 23 493 515 493 515 0.96
16 28 0.0023 0.19 12.2 0.9 1 23 521 544 521 544 0.95
17 28 0.00023 0.019 15.4 0.3 2 20 556 574 556 576 0.94
18 28 0.00035 0.028 14.8 0.3 2 23 635 656 634 656 0.97
19 28 4.9 4e+02 1.8 1.1 1 23 676 699 676 699 0.81
20 28 0.0028 0.23 12.0 5.1 1 23 703 725 703 725 0.97
21 28 0.00041 0.033 14.6 1.4 1 23 731 754 731 754 0.98
22 28 7.7e-05 0.0063 16.9 0.2 1 23 760 782 760 782 0.95
23 28 0.002 0.17 12.4 0.4 1 23 788 811 788 811 0.95
24 28 0.013 1.1 9.8 0.2 2 20 823 841 823 842 0.95
25 28 7.6e-05 0.0062 16.9 0.7 3 23 858 878 856 878 0.95
26 28 1.9e-06 0.00015 22.0 0.7 1 23 884 906 884 906 0.98
27 28 5.1e-06 0.00042 20.6 0.1 1 23 912 934 912 934 0.98
28 28 0.084 6.9 7.3 0.1 1 20 940 959 940 960 0.94

Sequence Information

Coding Sequence
ATGCATATAAAAACACACGAAGGTACCACGAAATACAAGTGCGAGATTTGCCAGAAGGCTTTCATGGTGAGCACGCACGCGATTGAACATAAATATTTCCACACCGGAGAGAAACCGTTCCAATGTGAGATTTGCGGCAAACATTTCATGTTTTCCTGGTTTTTATCATCGCATAGGCGAACTCAACATTGGGAAATTATGACCGGCACACCTCTGGTTAAATATGATTGCAACATTTGCAACAAACACTACACGTCGAGTACCGGATTGAGAAGGCACAATATCAGTAAACACAATCACGCTGGTAGCGATGCATCAGTCCTCTGTGATATCTGCGGAAAGAGTTTGTCCAGTGCagaaaaactcaaatttcACAGAAGAGTCCATACCGGCTATAAGCCGTACAATTGCGAAGTCTGTACTAAAAGTTTCTCCAGGAAGGAGCAGTTAAAAGAACACGAGAGGGTGCATACTGGCGAGAAACCtttcatttTGAAGATAGAAGAAACGCAAAAAAAGAAACCAGCCAGAAGGAAACGAGTTCGTCCGAAAGGAATAACGATAGGAACTTGTGATATTTGTGGGAAATCATTCAAAAGTAAGCGTCCCTTCGAAGATCATCTACAAATGCACGTGGACTGCTACACTTGCGAGAATTGCGGAACGTGTTACAAATCGGCAGCCGAATACGTGGTCCACAGCAGAGTGCATTCAAGCGAAGACTTTTTCCAATGCATATTTTGTGATTTCACAACCGATCACATCATTGAAATTCGCAAACACGTCAACGGAACGCACGAACGTGAACCTAAATACGTTTGCAAGATTTGCAAAAAAGGGTTCTACAATTTAACTTGGTTTCAAGAGCACGAGAACTACCACACTGGCAAAAAACCCTTCAAATGCGAAACCTGCGGCTTGCATTTCGAGTACTCTCGATTTCTGTCCGTGCATAAGGCCACAGTTCACAAGGACGAATTGACGCCGGGTCCGAAACTCCACATCTGCGTGATCTGTAAAAAGCAGTACCAACATGGAAACAGTTTGAAACTCCACATGAACGTCCACACAGGGCATGTCGCGATTTGCGATATTTGTGGCCGAATTTTGTCCAGTAAAGAAAAGCTAAAAGTTAAATCGCAACTTTTAGTTCACCGAAAAACTCATAAGAATTCTTTGGAACCAGATCCGCCAACGTACACGTTCGATGAGGACCGCACAAAGTACATTTGTGATGCGTGTTCTGCAGAATTTTCGACCGAGAATGACGCTAAAAAGCATGCCATCGATGCACACACCACCGTGTACACTTGCGAAGAGTGCAAGAAAAAATTCGTTTCGCCTGTGCTATACAGTTGTCATGTTAGAGATCATACATCTGAGCCGAATTTGCGATGCCCTTTGTGCGATTACTCCTCGGACAAGAAGTACAGGATGATCAATCATATCAACAACCTGCATtacagaaaatattattactattgCGCTACTTGCGGAAAGGGTTTCAACAATGCGGTAACCATGAAAGAACACGCCAACGAACATTACGGCATCAAACCGTTCGTATGTGTGGTTTGCAAGAAATCTTACGCGTTTTCGCAGTATCTGAATTTGCACCAAGTCCGGTATCACACGGTCGGAATTACGGGTCAGCTCCATCCCAGACAGTGCCCGACTTGCTTCAAAGTCTTTTCGAGGGAAAACAGCCTCTCTAAACATTTGGCATCGAATACTTGCAGGGGTGTTGCGCACAACAAGAGCAGACATCTTTGTGAAGATGCTAAGAGGGCCAAAAAACTTCGGAACAGTTCAAGGCGAAAAGTTCCAAAATCTGAATCGAAAAACAAATGCGACAATGCCAAAACAGTCTCTGAAGTAAAACTTGAAGAAGCAAATTCGTGGGAGTGTAAAAAATGCGACGCCACTTTCCGCATAAAGAGAGAACTGGCAGTTCACAGGAAAATCCACCGAAGCAAAATGGAACCGGACCCGCCCACCTACAAATTCGACGAAATTCAAGAAGCGTACGTTTGTAACACATGCTCGGCCGAATTCCAAACCGAAAAAGACGCCAAATGTCATCTGATCAAAGCGCACATAGCTCAGTACACTTGCGATGAATGcaaaagaaaattcaaaacgCCGTACCAATTCAGTTGCCACATGCAAGAGCATTCGGCCGACGAAATTTTCCAGTGCCCGTTGTGTAACTACTCGACACCGAGAAGATCGTGCATGGCCACCCACATCAACAGGATTCACTaccacaaattttattactattGCAACACTTGCGGGAAAGGTTTCAACGATGCGGTGCTGTTACGCGAACACAACAATGAACACCTCGGGATCAAACCGTTCGTCTGCGTGGTTTGCGAAAAAGGCTTTGCATTTTCCCGGTACTTGACGCTGCACCAAGTCCGCTACCATACGGTCGGAATCGTCGGGCAACTTCACGCCAGGCAATGTCCGACTTGTCTGAAAGTGTTTTCAAAAGACAACAGTTTGTCTAGACACGTGGCTGCGAACAGTTGCAACGGCGGAGGGCCCAGGCAGAAACGGCACCTTTGTGAAGTTTGCGGCAAAGGCTACCCCACGAAAGACAAGTTGAAAGTGCACAATAGGATTCATACCGGATTTAAGCCGTATTCTTGTACTTATTGCCCGAAAAGTTTCATCAAGAAAGAGTATCTGATTATGCACGTCAGAGTGCACACTGGAGAAAAACCGTATTCTTGTGAATATTGTGGCAGGACTTTTAATCAAGCCGCTCCGCTAAGGATCCACGTCAGGGGTCATACCGGAGAGCGGCCGTAcatttgcgatttttgtgAAGGAGGGTTCGTTTCCAAAGGATCCCTCAATATGCATAAGAAATGTTGCAGAGGAGCCTATCCGTCGGATTAA
Protein Sequence
MHIKTHEGTTKYKCEICQKAFMVSTHAIEHKYFHTGEKPFQCEICGKHFMFSWFLSSHRRTQHWEIMTGTPLVKYDCNICNKHYTSSTGLRRHNISKHNHAGSDASVLCDICGKSLSSAEKLKFHRRVHTGYKPYNCEVCTKSFSRKEQLKEHERVHTGEKPFILKIEETQKKKPARRKRVRPKGITIGTCDICGKSFKSKRPFEDHLQMHVDCYTCENCGTCYKSAAEYVVHSRVHSSEDFFQCIFCDFTTDHIIEIRKHVNGTHEREPKYVCKICKKGFYNLTWFQEHENYHTGKKPFKCETCGLHFEYSRFLSVHKATVHKDELTPGPKLHICVICKKQYQHGNSLKLHMNVHTGHVAICDICGRILSSKEKLKVKSQLLVHRKTHKNSLEPDPPTYTFDEDRTKYICDACSAEFSTENDAKKHAIDAHTTVYTCEECKKKFVSPVLYSCHVRDHTSEPNLRCPLCDYSSDKKYRMINHINNLHYRKYYYYCATCGKGFNNAVTMKEHANEHYGIKPFVCVVCKKSYAFSQYLNLHQVRYHTVGITGQLHPRQCPTCFKVFSRENSLSKHLASNTCRGVAHNKSRHLCEDAKRAKKLRNSSRRKVPKSESKNKCDNAKTVSEVKLEEANSWECKKCDATFRIKRELAVHRKIHRSKMEPDPPTYKFDEIQEAYVCNTCSAEFQTEKDAKCHLIKAHIAQYTCDECKRKFKTPYQFSCHMQEHSADEIFQCPLCNYSTPRRSCMATHINRIHYHKFYYYCNTCGKGFNDAVLLREHNNEHLGIKPFVCVVCEKGFAFSRYLTLHQVRYHTVGIVGQLHARQCPTCLKVFSKDNSLSRHVAANSCNGGGPRQKRHLCEVCGKGYPTKDKLKVHNRIHTGFKPYSCTYCPKSFIKKEYLIMHVRVHTGEKPYSCEYCGRTFNQAAPLRIHVRGHTGERPYICDFCEGGFVSKGSLNMHKKCCRGAYPSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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