Basic Information

Insect: Salpingus planirostris
Gene Symbol: Scrt1
Assembly: GCA_949788335.1
Location: OX460918.1:3791889-3795094[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00015 0.66 10.0 0.9 15 38 287 307 283 312 0.88

2 5 0.011 48 4.0 0.5 17 27 320 330 310 332 0.75

3 5 0.0015 6.4 6.9 0.3 17 28 346 357 336 368 0.81

4 5 6.4e-05 0.28 11.2 0.4 19 41 376 395 364 397 0.88

5 5 0.0059 26 4.9 2.0 2 43 388 425 387 426 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00015	0.66	10.0	0.9	15	38	287	307	283	312	0.88
2	5	0.011	48	4.0	0.5	17	27	320	330	310	332	0.75
3	5	0.0015	6.4	6.9	0.3	17	28	346	357	336	368	0.81
4	5	6.4e-05	0.28	11.2	0.4	19	41	376	395	364	397	0.88
5	5	0.0059	26	4.9	2.0	2	43	388	425	387	426	0.86

Sequence Information

Coding Sequence: ATGCCGCGCTGCCTCATGGCCAAGAAGTGGAAAGCGTACCCGTGGCCCGAGCGGCCGGACCCGCCcgaggacgacgacgaggagATCGACGTGGTCGGCGACGCGCCCTCCTGCTGGGGGCCCTCGAGCCCCACCGCCGGCGCCACCGCCCCCAGCCCGCCGCCGACCTCCCCCAACGGCACCACGCTCATCTACAACGGGTACCTCCACGACATGTCGCCCTCGAACTACaccacgacgacgaccacCACATTCATACCGCGCAACGAGGCGGTAACGGGGCAGTCGCAACCCTCGTACGCCACCCTCAGAACGGTCGTAGAAACGCAAGACCTCCGACCGGAATACGGAACGCCCGTCCAGCCaacgccgcctccgccgccgccaccacgCCACCGAAAATCCCTGGCAATGACGTTCACCAGCACCGGCACCGCCCTCTCGCTGCCCCCGAAGAAGAAGGACATCTACCGGCCCTACTCCCTCGAGGACAAGCCGCCCCCCGTCATCAGGGTACCGGCGGAAGAGGACCTCCACGCCGCCCACGCGATCCTCGACCTGAGCGCCTCGACCACCGTGTTTTTACCACCCCCGAATCCGCCACCACCGCCTCCACCTCCACCGCCAACTCAAGATATTCAATCGCCGTCGGAAAGGCGGGATGAGCGGGATCAAGTCTTGATAAAATCCGGGAAGACTATCGCGTACACTTACGAGGCGTTCTTCGTCAGTGACGGTAGGTCGAAAAAGCGGTTTAACAGTagtaacaacaacaataacactGGTAGTGGAGGGAATAATAATATCGGCGAAGACCCGACCGTTGGGTTGGTGGTTAAGGCTGGGTCGGGGGAGAAGGCCAAATACACTTGCAGCGAATGCGGGAAGCAGTACGCCACCTCCAGTAACTTATCGAGGCACAAGCAGACTCACAGGAGTTTGGATTCGCAGTCGGCGAAGAAGTGCATGACGTGCGGCAAGGCGTACGTGAGCATGCCGGCGCTGGCGATGCACGTGCTGACGCACAAGCTGGCGCACCGGTGCGGCGTCTGCGGCAAGCAGTTTTCGCGCCCCTGGCTGCTGCAGGGGCACCTGCGGTCGCACACGGGCGAGAAGCCCTACGGCTGCGCCCACTGCGGCAAGGCGTTCGCGGACCGGTCCAACCTGCGGGCGCACATGCAGACGCACTCGGCCGACAAGAACTTCGAGTGCCCTAGGTGCCGCAAGACTTTCGCGCTCAAGTCCTACCTAAACAAGCACCTCGAGTCGGCCTGCCTCAAAGACGAGGGCAGCAATGGGGGCGGGTGCAGCGAGGAGGCgccgccgggggcggcgagcgTCTACGCCGGGTGA
Protein Sequence: MPRCLMAKKWKAYPWPERPDPPEDDDEEIDVVGDAPSCWGPSSPTAGATAPSPPPTSPNGTTLIYNGYLHDMSPSNYTTTTTTTFIPRNEAVTGQSQPSYATLRTVVETQDLRPEYGTPVQPTPPPPPPPRHRKSLAMTFTSTGTALSLPPKKKDIYRPYSLEDKPPPVIRVPAEEDLHAAHAILDLSASTTVFLPPPNPPPPPPPPPPTQDIQSPSERRDERDQVLIKSGKTIAYTYEAFFVSDGRSKKRFNSSNNNNNTGSGGNNNIGEDPTVGLVVKAGSGEKAKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECPRCRKTFALKSYLNKHLESACLKDEGSNGGGCSEEAPPGAASVYAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01311782;
90% Identity: iTF_01311782;
80% Identity: iTF_01311782;