Spla003039.1
Basic Information
- Insect
- Salpingus planirostris
- Gene Symbol
- bab1_1
- Assembly
- GCA_949788335.1
- Location
- OX460918.1:5298515-5308148[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-12 1.1e-08 34.6 0.0 1 39 409 448 409 452 0.90 2 4 2e-13 3.8e-10 39.3 0.1 1 39 463 501 463 504 0.95 3 4 2.5e-19 4.9e-16 58.1 0.0 1 45 518 563 518 563 0.98 4 4 6.9e-17 1.3e-13 50.3 0.0 1 39 570 609 570 613 0.93
Sequence Information
- Coding Sequence
- ATGTCTGGCCAACATTACTGCCTACGGTGGAACAATTACCAAAGTAATATGACTTCCGTTTTTCACCAGCTGCTCCAAAACGAGGCTTTCGTCGATGTTACACTGGCATGCAATGATCTGTCGCTAAAGGCGCATAAAGTAGTACTTTCGGCTTGTTCGTCGTACTTCCAAAAGCTCCTTTTAGAAAACCCCTGCAAACATCCCACGATTATAATGCCACAAGACGTATGTTACGCCGACCTGAAGTTCATCATCGAGTTCGTTTACAAAGGAGAAATCGACGTTTCGCAGGCAGAACTGCAGTCGCTGCTGCGCACGGCGGACCAGCTCAAGATCAAGGGTCTGTGCGAGCCGCCCGACGAGAAGGAGAACTCGCCGGCGTCGCCCCGTCGCCATCACCAGATCCTCTCGCCGGCAAAGGGCCGGAAGTGCgcggcgtcgtcgtcgccgaAGCGGCTCAGGCCGATACACGACAATAACGGCAGCGTCGGCGGCTGCATCAGGCGAAGCGATATCGATATCGATAACCGGAGGCACAAGAGGAGGAGACATCTGAACGGCGGCTCCGAGAATAACAACAACAAGGAGGAGGATGGGAGCGTAGAAGAGGTATCGTCGGACGAAGAAGAACATGATATGCCAGTTGCTTTGCTAAATGACCGCAAAAGGAAAAGGGCGGAGCCGGAACAAGTAAAACCACTCAACATGAGCAGCCATGGCATAATGACGGGGCAGACAATCTTCTCGCAGTTCGGGGTGGAAGCGGACGACTTTCCGCCGGAGCCGCCCGCGCCCTCGGCCATCCCCGTGGGCCACGTCGACATGCGGGACCACTCGCCCAGTCGCACCCTCCTCACGAACACGATCCACCGGACGGACCTGTCCGACTCGAACATCAAGTACTGCGACATCAAAAAAGAGTCGGTCGACGTCAAATTCGAAACGCTGCGCTCGTCCTACGACCAGGACTCGCTGCTCGAGATGGACTCGCACCACTCGATGGACAGCCACGACGACGACCAGAGCATGCACACGATGATGGTCACGCCCGAGCTCATGGGGATGATGCCCGGCGTCTCGAACCGTCTAGTAGACTTAAGTAGTAGCAACGAAGTACCTGCAACGATGAAGATGAACAACGGCCATCCGGACGGCGCGCACCCGCACAACAACGCCGCCCGCGCCCACGCGGGCaccggcggaggcggcggcccGAAAACGTGGACTCAGGAAGACATGGACATGGCCTTAGACGCGTTACGCAACCACAACATGAGTCTAACCAAAGCTTCTGCGACTTACGGCATTCCCTCCACTACTTTATGGCAAAGAGCTCACAGATTAGGCATAGATACACCAAAGAAAGAAGGACCCACCAAATCGTGGACCGAAGAGAACCTCAACAGCGCCCTGGAGGCGCTCAGGACCGGAACCATTTCCGCCAACAAGGCCAGCAAAGCGTACGGCATCCCTAGTAGCACTTTATACAAGATCGCTCGGAGGGAGGGTATACGATTGGCGGCGCCCTTCAACGCCGCCCCGACGACGTGGACGCCCGAAGACTTGGAGAAGGCGCTGGAGTCGATCCGCTCGGGGCAAACTTCCGTTCAAAAGGCGTCGACCGAGTTCGGCATCCCCACCGGCACCCTCTATGGCCGATGCAAGCGCGAGGGGATCGAGCTTTCGCGTTCGAATCCGACGCCCTGGTCGGAGGACGCCATGGGCGAGGCCCTGGAGGCCGTCAGGTTGGGCCACATGTCGATAAATCAGGCGGCGATCCACTACAACTTGCCGTACTCGTCGCTGTACGGGCGGTTCAAGCGCGGCATCAAGTACGAGTCGGACAATATCGAACCGAACTCGGACAGCCAGTCGCAATTAGATAGCCACAGTTTCGGAATGGATTACGCCAATTCCCATCAGATCCAATACCAGAACCAGGCGAACAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAELQSLLRTADQLKIKGLCEPPDEKENSPASPRRHHQILSPAKGRKCAASSSPKRLRPIHDNNGSVGGCIRRSDIDIDNRRHKRRRHLNGGSENNNNKEEDGSVEEVSSDEEEHDMPVALLNDRKRKRAEPEQVKPLNMSSHGIMTGQTIFSQFGVEADDFPPEPPAPSAIPVGHVDMRDHSPSRTLLTNTIHRTDLSDSNIKYCDIKKESVDVKFETLRSSYDQDSLLEMDSHHSMDSHDDDQSMHTMMVTPELMGMMPGVSNRLVDLSSSNEVPATMKMNNGHPDGAHPHNNAARAHAGTGGGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESDNIEPNSDSQSQLDSHSFGMDYANSHQIQYQNQANS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01311668;
- 90% Identity
- iTF_01311668;
- 80% Identity
- iTF_01311668;