Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_949788335.1
Location
OX460929.1:3344346-3352581[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-25 2.3e-22 79.2 0.0 2 89 112 196 111 196 0.95
2 3 7.9 1.7e+04 -3.8 0.0 48 70 801 824 799 835 0.66
3 3 0.2 4.4e+02 1.3 0.0 32 67 1236 1272 1234 1309 0.76

Sequence Information

Coding Sequence
ATGACTACAAAGTCGGAGAAACTCACAAACAGTCCGTGTAAGTCACATGGGAATAAAACCTCTCCCAGCAAACAGGAGCCCCAGTATGGCTACAAAGAGGAGGCCTTCGAATTCGAGCCGCCCCCGGAAGCCCCCGTATTCTACCCGACCGAGGAAGAATTCAACGACCCCCTCGAATACATAAACAAAATTAGGAAGCACGCGGAAGGTTCGGGCATTTGCAAGATAAAACCACCACCGAATTGGCAGCCCCCATTCGCGGTCGACGTGGATAAACTTAGATTTACACCCCGAATTCAAAGACTTAACGAGCTAGAGGCGAAAACCAGAGTCAAACTTAATTTCCTGGACCAGATCGCCAAGTTCTGGGAGCTGCAGGGGTCGACCCTCAAAATTCCCATGGTAGAGAAACGGTGCATAGACCTCTATACGTTGCATAGTATTGTACAGAACCAAGGTGGGTTCGAGCAAGTAACCAAAGACAGGAAGTGGTCGCGGATCGCCCTCAACATGGGCTACCCGCCCGGGAAGAGCAGCATAGGGACTATCCTGAAAACCCACTACGAGAGACTTATCTACCCATTTGATCTTTTCAAGTTGGGCAAGACGCAGAATTTCAAAATGTCTGCTCCCCCAACTGAGGACAGTGAAAAGGGCGACAAGGACTACAAGCCCCACGGAATCGTCGGCCGAATGGCCATCAAGCCTCCGCCGGAAAAGCACGCACGACGATCGAAACGCTTCGAATCTGAGCACCCTAATAAACTAGATGACGAATTCAAACAAGAATGCAAAGAGGAAAACAAAGAACTGAAGCGTCTGCAGTTTTACGGGGCGGGGCCGAAGATGGCTATCGGTAAAGATAAAAAAGACGAAAAGCAAAGGGGCAAAGCGGTGAATTACGAATTTGATCCACTAGCCAAGTACGTTTGCCACAATTGCAGTCGCGGCGACAGCGAGGAGTACATGCTCCTGTGCGACGGATGCGACGACAGCTACCACACGTTCTGCCTGATGCCGCCCCTAAGCGAAATACCCAAAGGCGACTGGCGATGTCCCAAGTGCGTCGCCGAAGAAGTTTCCAAGCCGATGGAGGCTTTCGGATTCGAGCAGGCCCAACGCGAGTACACCCTGCAACAGTTCGGAGACATGGCCGACCAGTTCAAATCCGAGTACTTCAACATGCCAGTGCACGTGGTACCAACGAGTACCGTTGAGAAGGAGTTCTGGCGTATCGTCTCCTCAATCGATGAAGACGTCACAGTGGAATACGGAGCAGATCTACACACGATGGATCACGGATCGGGATTCCCGACGAAAACCTCTTTGAACCTCCTCCCAGGCGATAAGGAGTACGCAGATTCCGGTTGGAATCTCAACAATCTTCCAGTTTTAGAAAATTCGGTACTCGGCTACATAAACGCCGACATATCCGGGATGAAGGTGCCCTGGATGTACGTCGGGATGTGCTTCGCGACCTTCTGCTGGCACAACGAGGACCATTGGAGCTACTCGATAAATTATCTGCATTGGGGCGAGGCGAAAACTTGGTACGGAGTACCGGGTAAAATGGCCGAGGCTTTTGAAGATACGATGAAATCTGCCGCCCCGGAACTATTCCAGTCGCAACCTGACTTGCTCCACCAGCTGGTCACGATAATGAATCCAAATATCTTGATGAAAGCCGGAGTTCCGGTTTATCGGACTGATCAGCACGCAGGGGAGTTCGTCATTACGTTCCCGAGGGCGTACCACGCCGGGTTCAATCAGGGGTACAACTTCGCGGAGGCCGTCAATTTCGCGCCTGCCGATTGGTTACGGATGGGGCGAGAATGCATCGTTCATTACTCGAATTTGAGGCGGTTCTGCGTCTTCTCGCATGATGAGCTCGTCTGCAAAATGGCCCTCGACCCGGACAAGCTCGGGCTGACCATCGCGGCCGCCACCTATCAGGACATGCTCCAAATGGTCGAGACGGAGAAGCAGTTGCGGAAGAATCTTCTAGACGCTGGTGTATCGAAGGCAGAGCGTGAAGCTTTCGAGTTGCTCCCGGACGACGAACGTCAATGCGATACGTGCAAAACGACCTGTTTCCTGTCCGCGGTCACGTGCAAATGCACGCCCGACGTGCTGGTCTGCCTGCGGCACTACGGCAACCTGTGCGAGTGCCACGCCGAAAACTACACCCTGCGCTACCGCTACACCCTGGACGAGCTGCCGGTGATGCTGAAATCGCTGAAACTGAAGGCGGAATCGTTCGACCACTGGGTGAGCAAAGTCAAGGACGCGCTCGATCCGAAAACGCCGAAAACCCTAACCTTGCAAGAACTGAAAGCGCTCCTCAATGAAGCCGACGGGAAGAAGTTCCCGAAATGCGAACTCCTCCAGACGCTAACTGATGCGGTTGAAGACGCGGAAAAATGCGCTAGAGTCATCCAGCAGTTGGACCTGAATAAAATGCGAACGCGGACTAGGAATTCGTCGGATACGAaatacaaactgaccctaaacGAGTTGATTCTATTTCACGACGAGTTGGACAGTCTCGCTTGCATTTTGGACGAGGCCAAGAGCATCAAGGAGCTGCTAGAAGAGACGAAGAAGTTCGAAGCGACCAGTAAGAAGTTGCTCGAGATGAAACTGAGCGAGTGCTCGATTCAAGATTTGGAAGGCTGCATCAGCCAGGGCAACAATTTGTGTATCGAGTTGCCGAATTTGCGTAACGTCAAAGTGAGGATGCGTCAGGCACAATGGTTGAGTGACGTGCTCTCCTACAAGAAACGAACCGAAGTTCTCGGCTTGGATTCGATCAGAAATGTCATCAAAACCGGAAGTCAACTACCACCAAATCACGAGATTGAAAGCGAGTTAGGCACGCTGCAGTCGCTCTTGTCGCAGAGCGAGGACTGGGAGGAGAAAGTCCAGGCGATCCTTAAAGATACCGGCAGCGACGTTTTGATAGAGGTCGACAAATTACTTAAAGAGGCAAGCAAGATTAATTCGTATCTACCATCCGAAGAGTTCCTCTTCGAAGCCATGGACAAAGCGAGGGATTGGTTACGTAAACTGGAAGAGATGAATTCGGCAGAGTACTACCCGTACTTCAACGACATGGAAGACCTGATCAAGAAGGGACACCAATTGGCTTTGCACCTAGTCGAAGTTAACAAACTCGAATCGTATTTAGAGGCAGCTAACAACTGGAAGGAGAAGACTGTGAGAGCGTTCCTGCGCAAGAACTCCTCGTGTAATCTGATGGAAGCGTTGAGTCCAAGATCTCACTTCGGCAACCCTCCAAAAACCAAAAAGAAGAAGGACGAAGACCAAGACCACGGCATCTTCAATTTAAGCAGCGACATGGACCCGGCCACTGTAGTCTCGTTGTTCAAAGAAGCGGAGCAGAAGGAGATGGAACTTATTAAGAGCTTGAAAGCGGTGAATGGGGAGAAGAGTTTGGATCCGAATGACTCGGGCAGTTTCTGCGTCTGCCAGAAGGGTCTGTTTGGTACTATGATGCAATGCGAGCTGTGCAAAGACTGGTTCCACTCTTCCTGCGTCCAACTGCCCAAAGTGGCTTCCTCGAAGTACAAAGGCAACTTCACGAGCGTTTCGCTGCATTTGGGCTTCAAGGACTGCAAGTTCTTGTGCCCGAACTGCTTCCGGACGCGAAGGCCCCGCTTGGACGCGATTCTACTGCTGCTGATGTCGCTTCAGAAGCTCTTCGTACGCGTGCCAGAAGGCGAGGCGCTGCAGAGTCTGACGGAGCGCGCGATGAACTGGCAGGACCGCGCCAGGCAGCTGATGCAGACGGCCGAGCTGGAGGCGGCGAAGAGCAAGTTGACGTCGTTCGGGCAGAAGTActcggaggcggcggcgcggcAGAGGACggagaagatcatctcgaacgAGCTGAAGAGGGCGTACAAGAACCCGGAGCTGCTGCAGCGCGTGCAGGAGATAGCGCCGTTCAGCGGGGTCGCGGCCGAAGAGTCGATCGTGGTCAGCAAGGAAGGAGGCGTGAACGACTCGTCGGACGATTCGAAGGAGTGCGCTTCTGCGGATGACAGGATGGGGGAGCACGCGTACTCGCTGAATCTGCCCAAGTTCGATTCTGGGGAGTACCGGTTGCAGCTGAGCGCGGAGATGCGGACTCAGATTGAAACGTTACTTACGGAAGGGGACTTGCTTGAGGTTTACTTGGACGAGACTTTTCAATTGTGGAAACTACTACAGGCTGCCAGAGATCCAGATAAAGAAGCCATTTTGGTGGACTTTGACAGCCAGATAAAGGGCATGCCGTCGAAGAGGGGGCGCAAGCGTCGGTCCGAGGAGGTCGAGTCGAAGAAGGGCAAGGTGGTGAAGGGAGGGGACGGCGAGGGCAAGAAGGTGCGCCTGCCCAAGGGTGTCGGAGGGCCGAAGGACTCGCCGAAGAAGGACGGGCGGCGGAAGGGCCGTCGCCGGCAGTCGACCGGGTCGgaggacgacgacgaggacACGTGCGCGGCGACCGGGTGCCTCGGTCCCGCCGGCGAGAACGTCGACTGGGTCCAGTGCGACGGCGGCTGCGACAAGTGGTTCCACATGGCGTGCGTCGGCCTGTCCGCGCAGGACATCACCGAGGACGAGGACTACATCTGCATCACGTGCACGCAGACCACCACCTACGAGAGCCTGAACTCGGTCGAGAGTTTCCCCCTGGGCAGCAACGACTGCTCCAGCCTATCCCAGCCTTCCACCTCCAAGGACTCTGTCTAG
Protein Sequence
MTTKSEKLTNSPCKSHGNKTSPSKQEPQYGYKEEAFEFEPPPEAPVFYPTEEEFNDPLEYINKIRKHAEGSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSTLKIPMVEKRCIDLYTLHSIVQNQGGFEQVTKDRKWSRIALNMGYPPGKSSIGTILKTHYERLIYPFDLFKLGKTQNFKMSAPPTEDSEKGDKDYKPHGIVGRMAIKPPPEKHARRSKRFESEHPNKLDDEFKQECKEENKELKRLQFYGAGPKMAIGKDKKDEKQRGKAVNYEFDPLAKYVCHNCSRGDSEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGDMADQFKSEYFNMPVHVVPTSTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLLPGDKEYADSGWNLNNLPVLENSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGKMAEAFEDTMKSAAPELFQSQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECIVHYSNLRRFCVFSHDELVCKMALDPDKLGLTIAAATYQDMLQMVETEKQLRKNLLDAGVSKAEREAFELLPDDERQCDTCKTTCFLSAVTCKCTPDVLVCLRHYGNLCECHAENYTLRYRYTLDELPVMLKSLKLKAESFDHWVSKVKDALDPKTPKTLTLQELKALLNEADGKKFPKCELLQTLTDAVEDAEKCARVIQQLDLNKMRTRTRNSSDTKYKLTLNELILFHDELDSLACILDEAKSIKELLEETKKFEATSKKLLEMKLSECSIQDLEGCISQGNNLCIELPNLRNVKVRMRQAQWLSDVLSYKKRTEVLGLDSIRNVIKTGSQLPPNHEIESELGTLQSLLSQSEDWEEKVQAILKDTGSDVLIEVDKLLKEASKINSYLPSEEFLFEAMDKARDWLRKLEEMNSAEYYPYFNDMEDLIKKGHQLALHLVEVNKLESYLEAANNWKEKTVRAFLRKNSSCNLMEALSPRSHFGNPPKTKKKKDEDQDHGIFNLSSDMDPATVVSLFKEAEQKEMELIKSLKAVNGEKSLDPNDSGSFCVCQKGLFGTMMQCELCKDWFHSSCVQLPKVASSKYKGNFTSVSLHLGFKDCKFLCPNCFRTRRPRLDAILLLLMSLQKLFVRVPEGEALQSLTERAMNWQDRARQLMQTAELEAAKSKLTSFGQKYSEAAARQRTEKIISNELKRAYKNPELLQRVQEIAPFSGVAAEESIVVSKEGGVNDSSDDSKECASADDRMGEHAYSLNLPKFDSGEYRLQLSAEMRTQIETLLTEGDLLEVYLDETFQLWKLLQAARDPDKEAILVDFDSQIKGMPSKRGRKRRSEEVESKKGKVVKGGDGEGKKVRLPKGVGGPKDSPKKDGRRKGRRRQSTGSEDDDEDTCAATGCLGPAGENVDWVQCDGGCDKWFHMACVGLSAQDITEDEDYICITCTQTTTYESLNSVESFPLGSNDCSSLSQPSTSKDSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480636;
90% Identity
-
80% Identity
-