Rfun029708.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- GATA5
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000017.1:4313260-4324207[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-18 6.6e-14 53.0 1.8 1 35 302 335 302 336 0.97 2 2 3.9 2.8e+04 -3.4 0.1 19 25 373 378 371 378 0.73
Sequence Information
- Coding Sequence
- ATGGACCGAAGCGAAGACAGGGAGCCGTCTCCTCAGGATGTGAAGCCCAAAGTAGAGGAGATAGAACAAGACCAGCAGCAACCTCAACAGCCGCAGCAGCAACAGGCGCCCGCTCCAACCGTGATTAGAAGACGAGTCATTATAGACGCGGGTATTATTGTCGAAAATAATGAAGAACAACCAACGGAAGTGTCTAGCGAGGAAATAGTGAACACGTCTTCTACGCCGCGAGAGCAAAGCCCAAGTGAACAAAAACAGGAGCCCCCCGAATCCGGTCAATATTCGGAATTAATACAAACGGAAACACAAGAACAATTTACGGAAAATAAATCTTATACTGTTGATGTGATAACCACGAAAACGTACCAAAACCAAAACGAGTATCAACAAGATATTGGATACGCAACGGTGCAAATAGGACCAGTTACACTTTCGAATGCTGTTGAACCTCCAGCTGACTATGCAAATTTAGAGACAGCTCAATATAATAATGGTTATTCGAATGGTTCACAATATTTGAGTCAGCATCAATATCAGGATATGTATAGCATAGATAGAACTCCAGGGGATAGTCCTCCAACCAACACCTTGCTCTACAGAGACAACGACCCAAACTTGGCTTCTTCTGGATACCAGAATAACTTCGACGTTACGAGTTCCCAACAATCCCAAGTAAACCTAATACCATCTGGAGAGGCGTACTACAACACCACTACAGGAAACTGGAATCCCACTACCAATACTTACCAACAATACCAAGGAACCTCCAATCTGAATGTTAACTTGCATCAACCAGACAGTACCCAACCGTATTCAGCTTACATCAACGCCAGTTGGTCAAATAGTGCCATGGACGATGGTCAGCCGCAACGAACACCAAGCCAAGAGGTACTTGTGAAAGAGTGCGTTAATTGCGGCGCTAGTGTTACTCCCCTTTGGCGTAGAGACGGTACCGGTCATTATCTCTGTAATGCGTGTGGTCTGTACCACAAAATTAATGGTGTGCACAGACCACCAGTTAGGCCAACCAAAAAACCACAGGCGGAGCTAAATCGTCTCGACGGCGACGTTGACACGTTGGAGGTGTCGTTATTCATGACTCCTGGCAATCTTGGATCTGGATTGTGCAACAGTATCCATACCCAGTTCCTGATGGAGGTTACTGTTTCGGATGTACCAAGGTGCATCTATGATGTTCCTTAG
- Protein Sequence
- MDRSEDREPSPQDVKPKVEEIEQDQQQPQQPQQQQAPAPTVIRRRVIIDAGIIVENNEEQPTEVSSEEIVNTSSTPREQSPSEQKQEPPESGQYSELIQTETQEQFTENKSYTVDVITTKTYQNQNEYQQDIGYATVQIGPVTLSNAVEPPADYANLETAQYNNGYSNGSQYLSQHQYQDMYSIDRTPGDSPPTNTLLYRDNDPNLASSGYQNNFDVTSSQQSQVNLIPSGEAYYNTTTGNWNPTTNTYQQYQGTSNLNVNLHQPDSTQPYSAYINASWSNSAMDDGQPQRTPSQEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYHKINGVHRPPVRPTKKPQAELNRLDGDVDTLEVSLFMTPGNLGSGLCNSIHTQFLMEVTVSDVPRCIYDVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -