Basic Information

Insect: Rosalia funebris
Gene Symbol: -
Assembly: GCA_037954035.1
Location: JAZFAV010000009.1:22625673-22649949[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00016 0.019 17.1 0.8 2 23 25 46 24 46 0.97

2 18 5.8e-05 0.0069 18.5 0.2 3 23 57 78 55 78 0.96

3 18 5.7e-05 0.0068 18.5 1.0 1 23 84 106 84 106 0.97

4 18 0.00017 0.02 17.1 0.9 2 23 112 134 111 134 0.96

5 18 0.23 28 7.2 0.1 2 21 160 179 159 180 0.93

6 18 0.56 67 6.0 9.3 1 23 186 208 186 208 0.98

7 18 0.048 5.7 9.3 1.3 1 20 429 448 429 450 0.94

8 18 0.32 39 6.7 0.9 1 23 485 507 485 507 0.98

9 18 5.9 7e+02 2.7 0.3 1 19 575 593 575 596 0.74

10 18 8.1 9.7e+02 2.3 0.9 6 23 609 627 606 627 0.86

11 18 0.00039 0.046 15.9 1.2 1 23 666 688 666 688 0.96

12 18 0.053 6.4 9.2 0.3 2 23 739 760 738 760 0.95

13 18 0.082 9.9 8.6 1.2 1 23 919 941 919 941 0.95

14 18 0.16 19 7.7 0.1 1 20 1020 1039 1020 1041 0.93

15 18 0.0058 0.69 12.2 1.5 1 23 1046 1068 1046 1068 0.97

16 18 0.00063 0.076 15.2 2.9 1 23 1083 1106 1083 1106 0.93

17 18 0.17 21 7.6 0.2 2 23 1177 1198 1176 1198 0.94

18 18 0.47 57 6.2 0.2 2 23 1777 1799 1776 1799 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00016	0.019	17.1	0.8	2	23	25	46	24	46	0.97
2	18	5.8e-05	0.0069	18.5	0.2	3	23	57	78	55	78	0.96
3	18	5.7e-05	0.0068	18.5	1.0	1	23	84	106	84	106	0.97
4	18	0.00017	0.02	17.1	0.9	2	23	112	134	111	134	0.96
5	18	0.23	28	7.2	0.1	2	21	160	179	159	180	0.93
6	18	0.56	67	6.0	9.3	1	23	186	208	186	208	0.98
7	18	0.048	5.7	9.3	1.3	1	20	429	448	429	450	0.94
8	18	0.32	39	6.7	0.9	1	23	485	507	485	507	0.98
9	18	5.9	7e+02	2.7	0.3	1	19	575	593	575	596	0.74
10	18	8.1	9.7e+02	2.3	0.9	6	23	609	627	606	627	0.86
11	18	0.00039	0.046	15.9	1.2	1	23	666	688	666	688	0.96
12	18	0.053	6.4	9.2	0.3	2	23	739	760	738	760	0.95
13	18	0.082	9.9	8.6	1.2	1	23	919	941	919	941	0.95
14	18	0.16	19	7.7	0.1	1	20	1020	1039	1020	1041	0.93
15	18	0.0058	0.69	12.2	1.5	1	23	1046	1068	1046	1068	0.97
16	18	0.00063	0.076	15.2	2.9	1	23	1083	1106	1083	1106	0.93
17	18	0.17	21	7.6	0.2	2	23	1177	1198	1176	1198	0.94
18	18	0.47	57	6.2	0.2	2	23	1777	1799	1776	1799	0.92

Sequence Information

Coding Sequence: ATGGTTTTTACCAGATACACAACGTTAAAGAAGCACTTTGAAGAAAAACACAATCCGGAATACAAAAAGAAAGTATGCCCAATATGTACAAAGTCATTTGGGGGCTCCAGTAGCTACAGAAAACATGTAAAAAGGCATAGCGAAGAGCCTCAGACCACGAAGAGTATCTGTGAGATATGCGGTAAAATTTTGTCGTCAGCGTCAAGTTTAAAAGACCACATGATGAGGAGACATAGCGAAGAAAAGCCTTTTATGTGCGATGTATGCGATAGAGCCTTTACGACTTCTCAGTCTTTAAAGACTCATAAGGTCACTCATGAGGAAAACGTCATTGAATGTCCGATATGCAAGAAAAGATTCACTCAACACGCATCTATCAGAATCCATATTAAAAGGGTGCACGTAGGAGAAAGACCTCATCCCTGTAGCACATGGGTCGGGCTAGAGGACATAAACGACACAGACGAGGCTAATATCCAATGTGGAATGTGTTCAGAAATATTTCCATCGAAAGAAAAATTCATGGAGCACACAATGAAACTGTTCGGCGAGCTGTATACTTGTTGTAAATGTCACATAAAATTCAGAAACTGTATAGATCTTTACCAGCATTATGAAACACACCGAGACAACGAAGAGAACGTTGTCATTCAAAATGAGGAAGAAGTAGAAGAATTGGTGTTAAACTATGGTGAGCATGAAGAAGTTATAGTTCAACAACCTGCCGTAAATGAAACAAATGAACTTCTTTATATATTAGACGATTCCCACTGTGTTAACGAAGTCGTAATTGAGGAAGACCAGCCGACCGTAGAAACTACCGAAAGGTCAGATAGGGAAACAGTTGAAATTGTGAATTTAGAACACGGGTATGTAATGTCAAATGTGGAGAGCATCATGGAAGAGGAAGAGGATGCATATGGAAATATTGTAGTTACCAGAAGACTTGCAGTTCCAGCAAAAGCTTCGACTAGTAAAAGATTATACACACAACCAAAGGCGAGAGCGCCACAACCAAAAAAACGCCACGAAGTTCCTGACTTTTCGGCAACAAACTATATCTTCATCAACGCGAATGAGGAAATAGATGTGCCCCATTATAAATGCCTAAGATGCGAACAATTGTTTATAAACAAGGTGAAGGAAGCCAATCTGTCAAACAGCATTCTACGAATGTACACTTCGAAATTCAATCTGAAGCACTGCGAATTAGTTTTGGAAGACATAATGTTCAACAAcacttttaaaattgtaaataatcatTCTAAATTGCCACGTTTTAAATACAAGTGCTATCTTTGTTCAGAGACCTTCATCACTCATGAGGATTTGATTTACCACAAGTCGAAATTTAAAGATGAGCGATGTAAACATTTTGCCAAAATTCAAGAGGCTAGTTGGAGAAGAAAGGCGAAATCTCGCAAAATTCATACGAAAACTAGTAGTAATATATTTTCGTGTAATTATTGCCTTAACGTATTTTTGTCCAAAAAAGAATTAAGCGGACATTTAAATACGCACACTAAAGATGAAAATACTCATGACCTTATTCAGGTCCCTGATGTAATTACACCAAAGTTGTTGAGCCCCATGTGTGACAGGTCTGCTATAACATCGAACAATCAGAGAGCCACCCTTCCATTGTCTGATAATATTTTACCTGAGAAGACTTCAATTCGTTACGTCAAGAATATACCCAATGAGGTGATTAATAATATCCATTACACTTGCTTAAAATGCGATAGAAACTTTTTAGCAACAAACGAATTTGAAGAGCACATTCAGAAAAATGAATGCAGAGTGGAAAAGACGGGTTGTAGGTGTTGTAATATTACATTCGAAAAAAATATCGACCTGTTTCAGCATATTGTTGGTCTACATGATCAAGCGATATGCGAATTTTGCTATAAACAATTTCCATCCTTCTCAGATATGAATTGCCATAAGAAATTCGTTAACAATACCGTTAAGTTGCCAGAAGAGGGTCGAAGAAAATACACTTGCTATATCTGCTGGAAGAAATTTGTAACCCGCAAAGAATTAAATCAACACAAAGTTATCCACGAAGATGAAGATGAAGAATATTTACCCGAAAAAACTAAAGAATCGGATAAGTTGAAAACTCACGGAATTCTGATGCACAAGATTAATAACTTACAACCAGCGAAACCGGAACAGGCTCTTGACAGAGATACTAATAATTCAAACGATCTAACTTGTGAATTATGTTTTGATGTGTTTTCATCGCGTAGAGATTTGGAAGAACATATGGAGTTTCATGAACAATTGACAACGTCGGATGACAAAGTTAATGATGAGAACAGCGCCGATGACACTATTGAAGAGAAGGAAACCATTTGTATTGAATCTGCAGAATATAAATACGACATCATTACTAATTCTGAGGGGGTATCCTCACAGGCTTCGATAATAACTCCTAAAGATGAATCGGTAAACATAACATCAGTAGACAGTCACGATACTAAAGATATTCCAGTTATAGAATCCACTTTTAGTCTAGCAAATTCTGAGGAAAATAAGGCGACTAATATGGAAGATCTCAGTAAAGCCGATATTATTTCTAAACCAGAATATGAATTGTCACCACATTTCCGGATTGCTGAAAAAGTCGCCGTGAAATCCTTAAAATGTGTGATGAAGGAGTGTAAGATCCTCTTGACGGATGTAAAATTAGATAAGTCTTTGACGTTTCTAGATAACACAGTAATATTACCCGATGAACGGAGAAAAAAACATATGTGTTATATTTGTATGGAAAAATTTTCTACTGCACAACAGTTGGTTAAACATCGAGCTCTCCATTCCGATGATGAAGGATCCGATGAAGATGACATATTTGAGGAAGGCACTGACCTAAATTCAAAAGCTCATACATATGAGAATAAGGTGTCTACTGTTTCTAATGTACATAACAAATTAAAAGGAAATACTACTGTTAAATGTAAAGAAACTGCGGTTAAAATTAGCAGTCCATCTACAATTGATCCAAAAGGAATTTTACCTATGAAAGACTGTGATAATATAACTGAATCTCCTTTCAAATGTGATACGTGTCAGGTTTTTTTCGAAACGTCGGATGATGCTAAAGCGCATGCAGCAACAACTCGTTGTAAATTTTCTTGCAAACtctgtaaaagaaaatttaacacGCTGTATGCTTTTGTTGTTCATGTTATGCAACATAAAGtcaatattgttaaaaaacaaattccTGCAAATTCTGCTTATTCGTGCACTCTATGTGACAAATCATTTGACGATTGTTTTCAGTTAAGACGCCATAACATTATAACacacaaagtaaaaccaaatgACACCATAGCACCTCAAGAAAATAgtgaaaacataaataattgtcGCGAGTCTTTATTGccacaaaataatgttttagaaaCCGATACCAAAGATCCCGAAAATGTAGTCCAAAGCTCTATACAAAAAGCACTTCTCAGTGAACCCTCCAATAGTAATGCCCGTAATGTACCTGTAAATGAATCAACTGAAATGAGTTGTGACTTATGCtatgatatatttaattccGCAGAGGAATTAAAAAATCACATGGAGTTTCATAAACAACTGGAAGAGAAATCAGACACCATAGTAATTGAAGATGATGAAGATGAAGTTGAAGTAGTCGAGGATAAAAAGGATGCGCATGAAATTATTACTACTATTAAAAAATCTTCAGTGTCGAAGGGCTCCAAGAAGAAACTGCccataacaaataaatatgctaCATTAACGCCCATCTATTCTACTCCAAAAGTTTCTGAACCGAGCGTTTCTGCGTCATCCACTGCTAACGTGCCAAGCACTGCAGTTAATCAAATGCTCAGCGCCAAAATTAAAGACATGCTAACTCCGAATTCCGAAAAGTCTTCGAAAACAATTATGTTaaattcacaagaaaaattaccGCCTTTAATACCAGtacataaactaaaaaataagaTGAACACGTATTCTCGAAAAATTAAATCGTTGGCAGGTAGCGATAATTTTCAACTACATCAAACAGGACCCCGGAGTTActcattttgttataaagaaaTTAGTACGTCATCATCAACCACAACGACTACATCATATATACTAAATCCTATGATTGTGAGTGGTACGAATACTACTGGGAATACCATGGGTCCTGTTATGAGTACCAGTAGTGCTAACATTACAGAAGCAACACCGAAAACGGTAGCATCAAATATTACCGGGTCCAGTAATTCAAATTATACATTCGTTCTTGCAAACGTTCCCAATTTTGGGCAATCCGCCTCGACCATATCAGCAACCAATACAGTTCTAAATACAAATACCCCTTTGGTTACTACAAGCTTACAAAATAACATGCCAATGGTAACGACCGTTATGTCAACACCCATTACCAGTATAGTCAATACTTCTACAGCTAACCTTATTGCAAATTCCAATGGTAATAATGTTGGCGTCACAAGCATACAGAATGCTCAGTCCAATATCCCCAGTATTTTCCCGGGCATGTCCAACACGGGTACTCTGACAAATACGAACATAGCTTATATTATCAATCCTAATAATTCTGCCTTCTCTCCAGTTCCATCAAATTCTGTAAGTCTTACCGATTCGCCAACAAAAATTGCATACTTCATAATTCCTCACGGAGCCAATACACAATCTACTATAGTTGATCAACCAATAGTATCATCTTCAAATCAAATTACAATCAATAAACCTCCTGTGATGCCGATTATTCAAAACGCTTCTAGCGTTCAGAAAGATAATCAAGCAACAAGTAAAGACATTTACAGTGAAGCAAATTTAGAGCAGAATTCCATTCAAATGCCCCTAATAACTAGCGTCACTAGCTTACATGATCAGTCTGGTGTTAGCCCTGTGATTTCAAAGGAACGTGATGCTGTTAATTCAAATACAAATAATCTTACTGCACCAATAATTCTATCGATTGCCACAACAAGTGCTGCTGTTACTAATGACAATTGGTCTAAAAATATTACGTCTAAACCTGGCACGAGCGGTACAAATAGTGAAGCGCCTATTGTGATTGATAGCGATTCTTCAGCAGATGAGGAGcctccaaaaacaaaaaaattaggAAACAAAACCGATAATGGTTCTGACAGTGAAGAAGGCCTTGTTATTGATGAGAACCCTGGAGAAAAAAAGACAAATACAGAAGAAAAAAAAGGATTTATTTCAGTTAGGAATTTAACCGAATTGCTGGATCCAAAAAAAGCTGACCTAGAAGAAGACAAAGGTgatataaataagaagaaaactAAGGAAAAAAAGTGGAATTTTCCCATGAAATGTGATGGTTGTTCGGTGGTTTTTCAAAGATTGAGAGCAATGAGAAACCATAATGAGAGGAAgcataaatgttcaaaatgcgACTTTAAATGTTGTAAAGtagcaaaattaaaagaacactACTTTGAGAACCATGGAATTTATTTGTGTTGGTGTTGTTCGTTGCGAACTGAGAGTTATGCTATTTTCCAGGAACATCGACGTACTAAACATAGTCAAAAACCACGTAGTAATAGTGATTTAAAGCGATCGTCTCAGGAAATTTGTcccaaaaatatagaaaaagaaaataatgaaagtgAAAGTACTGGTATATTATAA
Protein Sequence: MVFTRYTTLKKHFEEKHNPEYKKKVCPICTKSFGGSSSYRKHVKRHSEEPQTTKSICEICGKILSSASSLKDHMMRRHSEEKPFMCDVCDRAFTTSQSLKTHKVTHEENVIECPICKKRFTQHASIRIHIKRVHVGERPHPCSTWVGLEDINDTDEANIQCGMCSEIFPSKEKFMEHTMKLFGELYTCCKCHIKFRNCIDLYQHYETHRDNEENVVIQNEEEVEELVLNYGEHEEVIVQQPAVNETNELLYILDDSHCVNEVVIEEDQPTVETTERSDRETVEIVNLEHGYVMSNVESIMEEEEDAYGNIVVTRRLAVPAKASTSKRLYTQPKARAPQPKKRHEVPDFSATNYIFINANEEIDVPHYKCLRCEQLFINKVKEANLSNSILRMYTSKFNLKHCELVLEDIMFNNTFKIVNNHSKLPRFKYKCYLCSETFITHEDLIYHKSKFKDERCKHFAKIQEASWRRKAKSRKIHTKTSSNIFSCNYCLNVFLSKKELSGHLNTHTKDENTHDLIQVPDVITPKLLSPMCDRSAITSNNQRATLPLSDNILPEKTSIRYVKNIPNEVINNIHYTCLKCDRNFLATNEFEEHIQKNECRVEKTGCRCCNITFEKNIDLFQHIVGLHDQAICEFCYKQFPSFSDMNCHKKFVNNTVKLPEEGRRKYTCYICWKKFVTRKELNQHKVIHEDEDEEYLPEKTKESDKLKTHGILMHKINNLQPAKPEQALDRDTNNSNDLTCELCFDVFSSRRDLEEHMEFHEQLTTSDDKVNDENSADDTIEEKETICIESAEYKYDIITNSEGVSSQASIITPKDESVNITSVDSHDTKDIPVIESTFSLANSEENKATNMEDLSKADIISKPEYELSPHFRIAEKVAVKSLKCVMKECKILLTDVKLDKSLTFLDNTVILPDERRKKHMCYICMEKFSTAQQLVKHRALHSDDEGSDEDDIFEEGTDLNSKAHTYENKVSTVSNVHNKLKGNTTVKCKETAVKISSPSTIDPKGILPMKDCDNITESPFKCDTCQVFFETSDDAKAHAATTRCKFSCKLCKRKFNTLYAFVVHVMQHKVNIVKKQIPANSAYSCTLCDKSFDDCFQLRRHNIITHKVKPNDTIAPQENSENINNCRESLLPQNNVLETDTKDPENVVQSSIQKALLSEPSNSNARNVPVNESTEMSCDLCYDIFNSAEELKNHMEFHKQLEEKSDTIVIEDDEDEVEVVEDKKDAHEIITTIKKSSVSKGSKKKLPITNKYATLTPIYSTPKVSEPSVSASSTANVPSTAVNQMLSAKIKDMLTPNSEKSSKTIMLNSQEKLPPLIPVHKLKNKMNTYSRKIKSLAGSDNFQLHQTGPRSYSFCYKEISTSSSTTTTTSYILNPMIVSGTNTTGNTMGPVMSTSSANITEATPKTVASNITGSSNSNYTFVLANVPNFGQSASTISATNTVLNTNTPLVTTSLQNNMPMVTTVMSTPITSIVNTSTANLIANSNGNNVGVTSIQNAQSNIPSIFPGMSNTGTLTNTNIAYIINPNNSAFSPVPSNSVSLTDSPTKIAYFIIPHGANTQSTIVDQPIVSSSNQITINKPPVMPIIQNASSVQKDNQATSKDIYSEANLEQNSIQMPLITSVTSLHDQSGVSPVISKERDAVNSNTNNLTAPIILSIATTSAAVTNDNWSKNITSKPGTSGTNSEAPIVIDSDSSADEEPPKTKKLGNKTDNGSDSEEGLVIDENPGEKKTNTEEKKGFISVRNLTELLDPKKADLEEDKGDINKKKTKEKKWNFPMKCDGCSVVFQRLRAMRNHNERKHKCSKCDFKCCKVAKLKEHYFENHGIYLCWCCSLRTESYAIFQEHRRTKHSQKPRSNSDLKRSSQEICPKNIEKENNESESTGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -