Rfun055549.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- CSRNP3
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000036.1:12444372-12446147[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.017 5.4e+02 2.1 0.1 65 119 63 114 33 124 0.63 2 4 0.078 2.4e+03 -0.0 0.3 75 110 177 212 127 227 0.49 3 4 9.8e-19 3.1e-14 55.2 0.1 2 64 297 359 296 376 0.80 4 4 3.8e-35 1.2e-30 108.9 12.5 108 218 371 480 355 480 0.92
Sequence Information
- Coding Sequence
- ATGGAGAACCCGAGTTTAAAACATAATACATGTTTACGCCCAGTGAACGCCTGTGGAATGACACGTTCGGTAAATATAAAGTTAGCTCTAACAGAAGAAAATTTGGATTATCTTTTACATCAAGAATATACACTCTCCCAAATGTGTTATAAGGCTGATCAACTAACTTTAGACATATTGGACGGTCGAGAAAGTATCCAATCTTTAAAGAGCTCCAACAAAATTTGCACTGCTGGAAAGGAGGACCAAATAAGTATCGTTGACATATCAGACGATCAAATGGATGTTGAATACTCAGTAGACCGAAATAAGGCTGATCCTCTCGAAATATTTACTACAAAGCCTGAAAGACATTTTGATATTATCAATAGTGATTATATTTCTATGCATAATATTTGCCCTCTTCATGAAGTAAAGAGGAAAATGATTGagcataaatttaaaaagagaATTAAGAACAATTCTATAGGAACTCTGGTGCGTAGAGAACCAGACGACAAAAAATTAACGACAAATTTGCCTGAGTCGTTGTTCCTAAAGGAATATGCCGACTTGAATGAATCTGATAAAAAGGAAGATTCGGATCATTCTTCTGTCGGAGATAGAAATAATGATTCTTCTTCTGAAGAAGATTTAGCTTTGGTGATTGCACCATCTCAAAGtaccataattttaaattctgatACATTTAACTTAGATGTTCCTACACCTGACGTAGCTTGTTGTGACAtttattctcaaatatttaATGTTCCTACAACATTGACCGGCAGCGGCAGAATTGAAGAATCAAATGCCCTTGactataatataaattctataGTACCTGCTAAAAGTAACTTGAAAAGGAACATACCAGCTGGCATGGATCACAACCAAAATAACGTAAAAAAGTCTAGTCTGAGATTTAGTAATATCACCACGTTCTACTTTGAAAGGTTGCAGGGTTTTTCTAGCATCCCCACCAAGGGGGGCTGTACCTTAGGGATGGCAAATCATCATTTCTATATCAGTACTGTCCCAGTAGACGAGTACGAGTATAAAAAGATACAGGGAGCATTAAGGAAACGGAGGACAAATAACATATTCTATAGAGAGACTGAGGTGCAAGAGAAGCCAAAACGTGTTCAGGCACTGAActtaaaccaaagggaagaaCTACTCGTGTCCGCAAAAGTACAAATTGAACTGAGAGAGGCAGACGACTGCGCGTACATCCGTAGCTCGAGGGCTTCAGCCGGATGCGACTGCAAAGATTACTGTGATCCTGATGTATGTAGCTGCAACTTGGCGGGAGTTCAGTGTCAAATAGATAGCCCCAACTTCCCTTGTGGCTGTTCAAAGGAGAATTGTAGGAATGCGATGGGATGCAATGAATATAATTACGGCAAAGTTAAGGCGCACTTCACTAAgactatgaaaaaaattaaattggagAAGGAGGGGAGGATTTCTAAGAGAAAGCAGGCGTCCCCGTCTAAGATTCTCATTCACAGTTTAGAGAGAGACACAGATATCGATATGATCGACGTTTAA
- Protein Sequence
- MENPSLKHNTCLRPVNACGMTRSVNIKLALTEENLDYLLHQEYTLSQMCYKADQLTLDILDGRESIQSLKSSNKICTAGKEDQISIVDISDDQMDVEYSVDRNKADPLEIFTTKPERHFDIINSDYISMHNICPLHEVKRKMIEHKFKKRIKNNSIGTLVRREPDDKKLTTNLPESLFLKEYADLNESDKKEDSDHSSVGDRNNDSSSEEDLALVIAPSQSTIILNSDTFNLDVPTPDVACCDIYSQIFNVPTTLTGSGRIEESNALDYNINSIVPAKSNLKRNIPAGMDHNQNNVKKSSLRFSNITTFYFERLQGFSSIPTKGGCTLGMANHHFYISTVPVDEYEYKKIQGALRKRRTNNIFYRETEVQEKPKRVQALNLNQREELLVSAKVQIELREADDCAYIRSSRASAGCDCKDYCDPDVCSCNLAGVQCQIDSPNFPCGCSKENCRNAMGCNEYNYGKVKAHFTKTMKKIKLEKEGRISKRKQASPSKILIHSLERDTDIDMIDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -