Rfun013490.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- Camta1
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000008.1:5392211-5419471[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.7e-15 2.4e-10 41.9 0.2 75 116 27 67 21 67 0.90 2 3 0.062 2e+03 0.3 0.0 27 66 201 240 192 244 0.83 3 3 0.39 1.2e+04 -2.3 2.5 13 87 1199 1279 1193 1334 0.69
Sequence Information
- Coding Sequence
- ATGGGGATTACAAGTGACGCCCTCACTATCTCAATGTTTTCAGAAGATCTGATGGGCCGAAGGACTCCAGTTCTTCGACTTGTCGCACTCCGGTGTATATATGGGTGCTACGTCCATTCAGCAATATTACCAACGTTTCACAGAAGGTGCTACTGGCTTCTTCAGaatccAGATATCGTCTTGGTGCACTACCTGAACGTTCCCTACCCAGACGACAACAAGCTGGCCGTAATAACCCCAAGCCTGGCCCTTTGGGCCGACAAGAAGGAATGGACGAAGGACGAGCTGGTCTCTCAACTTAAGCCCATGTTCTTCAGCGAGGATGAACCCGACTTAAACAACGAACTGGAAATATCGAATTTTAAATTGCAGACAGCAGAGACGGTAGAGGCTATAGTCAGTCAATTGATGGAAAAGCAGCGCGTGGCGAGGCAGGCGGCTCTCGTTAAACAGCTGGAATGCGGATGTCCGGACTCGACATGCGCAGACGGGAAGAGTTGCTCGCACCCCATGCGACGGATAACCTCCGCGAAGGATGTCGCCAGCTCCCCACTACCGAGCTCCAGCTCGAACTCTCGCCCTCCCAGCAACTCAGACAACAATAACCAGGTCTCCTCGACCACCGGGTCCGGTTCCATGTTGCTGAGCAATAACAACTCGCCGCGGGTATACTCCCGGGACTCAAGGAACCATCAGGTGGCGCAGAACAACAGCAACTGCTCGTCGAGTTCGGGGAACACCCCACCGCTCGTGCTGAGCCTCTCCCAGATCCAAGGTGGCGGGGGACTCCTCATCCTCAATTCCAGTAATTCTAGTAGTAACTCTAGTCACCAGAACTTAGTCAATCCAGTCTCGGTGGCCAATTTCGTGTGCAATACGGGTAACAATCGGGGAATGGCGAAGGAACGAACTGGTCATCTGGTGCTGAAGCAGGAAGTAATGGACACGAACTCGTCCTGCCTCCATTCCACCAAGCAGAATTCCAAGTCCAGCGTCAGGGAGATGAAAATGGAAGTGAACGAGAACTTAAGACAATCATTATACAATGACGGGTCGATGTACGGAAACGCTACACCCAGGCCAAATCTTTCTTACAGGAACCACCACCAGTCGCAAACGGAGGTGGTGATGTCGAGCGCGCCCTCGACACCCTCGAAGCACATGGATACCACTCAGGAGGAGGCCGTCGAGGACTTCAAACACCAGAACTTCTGCGGAGAAACGGTAGTTCTCCTAGGAACCGATTCCGGCGGTTCATTAGTTAGCAAAACTGACGGTTCTTCCATTATAAACGGCGGGTTCTTCAACGAAACCCTGGACCTGTCCCAGGAGGACATCCAGAGGACCCTGTCCGCCAACATGCCCTTGTGTTCAACGGAATTAGGCGGCCATCAGCGGCACAACTCGGAGCCGAACAACGCGGGCCAGCAGAGCAAGTCGCAGAAACAGCAGCAGAACCTGACGACCGAGATCAATCCTATGGATTTCATAGACAGCTGCGACGTGGTGGTGTCGCCCACTCACGTGGTGGACGACGACGTGTTCGTGAATCTGGACGCGTTCGATATGCTCGGCGAGTTTCCCGACCTAGATGGTCTAGATTCGAGCCACGCAGGGCTCCTAGATGTAAATCCGTCCGACGGCAGCAGAGGTAATGGTAAGACGCACGTGGAGCAGCAGCATGGTGGTCATTCGCTGGAAGGGTCCGCGAAAATCACCGACTACTCTCCAGAATGGGCGTACCCGGAGGGGGGAGTCAAGGTCCTTGTCACTGGGCCCTGGCACTCCTCGGGGCCGTACACTGTACTTTTTGATACATTCCCTGTTCCCACTACTTTGGTTCAAAGTGGTGTTTTACGTTGTTATTGTCCAGCCCACGAAGCTGGATTAGCTACTTTGCAAGTTGCATGCGACGGCTATGTGATTTCCAACTCTGTGATATTCGAATACAAGCTACCACCTAGAGAGGAGCATATGGCCGCTCCCGAACCCAAGGTCGAAAGGTCAAACGATAACCTACTTAAGTTCACCCTGCTGCAGAGGCTAGAGGCCATGGACGACAGGCTGCAAATCAAACAGGAGCCATCTGACGGAGATGTCGTCGAGGATACCGCCCTTTTTGGTCAGCCCAACTTCGAGGATAGGCTGGTCAACTTCTGCCAGAACATGACGTCAAGGATATGGCGGCACGGCGAAGAGTTGAGCGTATCCTGGTTCGCCAGCCACAGGGGAATGACGCTGCTGCATCTAGCCGCGTCTCTAGGCTACTCCCGATTGGTGTGCGCTATGCTGCACTGGAGGGCAGAGAATTCCTCGTTGCTGCTGGAGACCGAAGTGGATGCTCTCAGCCAGGATGAGGATGGATACACGCCActgATGTGGGCCTGCGCTAGGGGCCACACAGAGACGGCAGTTATGCTCTACAAATGGAATCACACAGCGTTGAACATGAAGAACACGTTGAACCAGACCGCCCTCGATTGCGCTCGAACTAACAACTATTCCGACCTGGTAAAGGAGCTTGAGAAACTAGAACTACGTAGAGACAAGGCGAATATGTTGCTACAGTCGAACCAATCTTCTACGGAAGCCGCTCCTTCCCCATCGGCCATTTCGCCGGCCAGTTCTGTGGCCTCCCTAGCCTCGATCGCTTCTACCAGCAAGTCGCACGACGGGGTTTTCCTGAGACCGGGAGCCGTCACACGgaGCGAAACCaacaagtacaaaatattaaatctagACTTAGATTCCGACGGTAGCAAAATAATAACGTCCACGCCAAGTCCCCTGCTATCAGATTTCTCGTCGAGCACCAGAGGCAGTAACGGGCAGAAGTTGATCAAGAGGCCGTCGATAGACAGCGGTATCCACATGAGCTGCGGCCCGGCCACAGAGAGCGTCCGACCCAAGAGTTCCAAAGTTTACAGTGTCCGCGAAATGCCAAAGCTCTGCAAATTTGATAGAAGCATGTCATTACCTCTCAACTCCTCACTGGCAAAAGACGATACTTCCGAAGGCGACCCCACAGACATTCACAGAAAAATGGACTTCGCACTGTGCGAGATAGGGAGTGGCCCCCGAAGCAGTAGTCCCCTGATAGACGTAGAGGCTGTCTCAGATGACGAGAGTGACGTCCACAATGGTACCGTAGGGGAACAAGACGCAAGAGTTCTCACGTTGGCAGAACAAATAATCGCGGCAATGCCCGATCGGATCAAGaaCGAGAGCGAGGAAATGTTAATGGAAAACAGTCCAGGCCCTCCGGACGCTATGCAGGCCAATGATAGTCTTTCAGATGTCTTCATGGAACCCCTCTTGGATCAGTCGTCATCTAGTTTCGAGTCCACGGAGTTCAACTTCGAATTCTCTGATAATAATTATCGTTATTATGATGTGGGGACGCCCTGTTCCAGTCTGAGCCCTGCCTCGTCCAGCTGCCTACAGTCTCCGTGTTCATTTACGTTGGATTCGCCATCGCCACCGCCTACAACGGCCGATTTTTGCGAATTTTTCCAAGCTTCCGGGACGGTATTTGAGAAGGACTTCTCAAATTTGACATTGTCTGACCGCGAGCAAAGAGAGCTGTACGAGGCCGCCAAGATCATCCAGAAGGCGTACCGCTCCTACAAGGGCAGGCAGCAGCAGGAGCAAGACAAGGAGAGGGCGGCGGCCGTCGTCATCCAGAACTACTACCGCAGATACAAGCAGTACGCCTACTACAAGCAGATGACCCATGCAGCGATGGTCATCCAGAATGGCTTTAGGTCGTACTGTGAACATAAAAGGTTTAAGAAAAGCCAGGAGGCGGCCGTGTGCATCCAGAATTACTACCGTAACTACAAGGAGCAGGGGGGTAGAGGCAGCAGGGAGGGAACCCCGGCCTCTTCGGGGCTGAAGCGTACCTACTCACAAAGGCGACAACACCAAGCAGCCAGGAAGATCCAGCAATTCATGCGGCAGTCGAAGAATAAACTGCAGAGAGAACGAGCAGAAAGAGAGAGGCAGGGGGGCCAGTCAGTGGATGCCCATCAAAGGTCACAGTGTCCAGGGGGCTCTTCCAGTTACATAGGCCCAAATAGCAGATCAAATAATACAGACTTTTTAGAAGACTCAAAAAGCGGCAACGATAAGCAGTGA
- Protein Sequence
- MGITSDALTISMFSEDLMGRRTPVLRLVALRCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKDVASSPLPSSSSNSRPPSNSDNNNQVSSTTGSGSMLLSNNNSPRVYSRDSRNHQVAQNNSNCSSSSGNTPPLVLSLSQIQGGGGLLILNSSNSSSNSSHQNLVNPVSVANFVCNTGNNRGMAKERTGHLVLKQEVMDTNSSCLHSTKQNSKSSVREMKMEVNENLRQSLYNDGSMYGNATPRPNLSYRNHHQSQTEVVMSSAPSTPSKHMDTTQEEAVEDFKHQNFCGETVVLLGTDSGGSLVSKTDGSSIINGGFFNETLDLSQEDIQRTLSANMPLCSTELGGHQRHNSEPNNAGQQSKSQKQQQNLTTEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLDGLDSSHAGLLDVNPSDGSRGNGKTHVEQQHGGHSLEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEHMAAPEPKVERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDGDVVEDTALFGQPNFEDRLVNFCQNMTSRIWRHGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGYTPLMWACARGHTETAVMLYKWNHTALNMKNTLNQTALDCARTNNYSDLVKELEKLELRRDKANMLLQSNQSSTEAAPSPSAISPASSVASLASIASTSKSHDGVFLRPGAVTRSETNKYKILNLDLDSDGSKIITSTPSPLLSDFSSSTRGSNGQKLIKRPSIDSGIHMSCGPATESVRPKSSKVYSVREMPKLCKFDRSMSLPLNSSLAKDDTSEGDPTDIHRKMDFALCEIGSGPRSSSPLIDVEAVSDDESDVHNGTVGEQDARVLTLAEQIIAAMPDRIKNESEEMLMENSPGPPDAMQANDSLSDVFMEPLLDQSSSSFESTEFNFEFSDNNYRYYDVGTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGTVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRQQQEQDKERAAAVVIQNYYRRYKQYAYYKQMTHAAMVIQNGFRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGRGSREGTPASSGLKRTYSQRRQHQAARKIQQFMRQSKNKLQRERAERERQGGQSVDAHQRSQCPGGSSSYIGPNSRSNNTDFLEDSKSGNDKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01289983;
- 90% Identity
- -
- 80% Identity
- -