Rfun054289.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- rcor2
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000035.1:23724077-23736628[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-09 7.3e-06 27.8 0.0 3 46 131 174 129 174 0.97 2 3 2.7 7.7e+03 -1.1 0.8 36 44 271 279 271 280 0.88 3 3 6.2e-13 1.8e-09 39.3 0.0 3 46 378 421 376 421 0.97
Sequence Information
- Coding Sequence
- ATGGTGTTAGCcgaaaaaaatagtgaaaatgcCAGAAACGGCAGAAGGAGCAGGGGGCCGAGTCCAAATGGTCACGTACAAGCTGAATCCACAAGCGAGGATGAAAGCACGGTCCCGGTAGACAAAATCCGGGTGGGACGCGACTATCAGGCAGTCTGCCCAGAGTTACAGCCAGAAAACCAAAGAAAACCCGAGCTATTAGCTGACAGAGCCCTTCTGGTTTGGTCCCCGACAGAAACTATCCCCGAGTCTAAGTTGGAGGACTATATTGTATTGGCTAAAGATAAATATGGCTACAACGGAGAACAAGCTTTGGGAATGTTATTTTGGCACAAACATGATTTAGAAAGGGCCATGTTGGACCTTGCAAATTTCACACCATTTCCAGATGAATGGTCAGTAGAAGACAAAGTGCTCTTTGAACAAGCCTTCCAATTTCATGGAAAAAGTTTTCACAGAATACGTCAaatgTTACCGGATAAAAGCATCGCCAGTTTAGTAAAGTATTACTACAGCTGGAAGAAGACAAGGTCTCGCACAAGTCTCATGGACAAACAAGCGAGAAAACTGAATACGCCCAAAGACGATGGTGCCCCATCAGAAGCGGGATCTGAAGGTGGTTCTAATGAAGAATCCGACCATGACGAAAAGAAATGGACAATTCATCGTGGTATTCGACGTAAAAGTGGTTCTCCAACTCGTACTGGTCATCCCAGCGACGAGAATGCTACTCAGGGTGAGGGTGGCGCGTGTTCTAACTGCGGAGTCATCTGTACTGTCACTCAGGTGACTGCCAAGGGGGCCCTGTGTAATTCCTGCTACCAACATTGGAGACGCACTGGGCTGTTGAGGCCCACTTCAGGGCCGACGGGTGGCAAACGCGGTACGCCCCTGGGGGCGCGCCATAAACGCAAGCCCCCCCGTGGCATGTACATCAACCACGACGATCTTGCTGCGATGGCTTCGGGAAACACAGGTGTCGTCATGCTTAAAGCTATGGATCGAGAGTTAGATTCCCTGCAAAGACAAATACAGCAGAACAAACAGAGCATTAGTTCGTTGAAGCGCAAGCACACAGATTCAGTAGAAGACCTCCGTCCGAGTAACGAGAACAATTCGAGGTTCAACTCTCGCTGGACCAGTGACGAGTTATTGATGGCCGTTCAAGGTGTACGTAAGTACGGCAAGGACTTCAAAAGTATCGCCGAGGTGATTGGTAATAAGACAGAACACCATGTCCGCACATTCTTTGTTAATTACCGTAAAAGGTACAATTTAGATACCATTCTCAAGGAGTGGGAGAAAGATAACGGTCCGTTGCCGGAAGATAATTCCGATATCAGAAGTGAGATCGATgacaataatgataatgacGTTATTTGTATATCACCTACTCCCACTTCTAAGAAGGAGATAAAAAATGGAAAGGTAGCTCAGGTTGCAAAATGA
- Protein Sequence
- MVLAEKNSENARNGRRSRGPSPNGHVQAESTSEDESTVPVDKIRVGRDYQAVCPELQPENQRKPELLADRALLVWSPTETIPESKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLERAMLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKDDGAPSEAGSEGGSNEESDHDEKKWTIHRGIRRKSGSPTRTGHPSDENATQGEGGACSNCGVICTVTQVTAKGALCNSCYQHWRRTGLLRPTSGPTGGKRGTPLGARHKRKPPRGMYINHDDLAAMASGNTGVVMLKAMDRELDSLQRQIQQNKQSISSLKRKHTDSVEDLRPSNENNSRFNSRWTSDELLMAVQGVRKYGKDFKSIAEVIGNKTEHHVRTFFVNYRKRYNLDTILKEWEKDNGPLPEDNSDIRSEIDDNNDNDVICISPTPTSKKEIKNGKVAQVAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566170;
- 90% Identity
- iTF_00166046;
- 80% Identity
- -