Rfun005182.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- ct_1
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000003.1:19647024-19679253[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-28 1.2e-23 84.7 0.0 2 72 316 387 315 392 0.95 2 3 1.5e-31 2.4e-27 96.5 0.0 3 76 722 796 720 799 0.95 3 3 2e-30 3.1e-26 92.9 0.0 3 75 952 1025 950 1029 0.95
Sequence Information
- Coding Sequence
- ATGCTATGCTCATGTAAACAGACTAGGTATGGGGACGAGAACAGGTCTCAAATAAACCAGCTGCTGGAAGAGGTGCAGCGGCTCCAGGGATGCATAGCGAAATTGCAGGAGACGTCTATGACCCAGATCACTAGGCTGGAGGACCAGCTGGAACAGAAACGACAGCACATCCTCCGGCTCGAGAACAAATTGGACTCCCAGAAAGATTACGACGATCTCAAACGCGAAGTCAGCATATTGCGGTCCGATCTTGCCAACAACCCGGATGGCAAAAGCATCGAATTACTGTTGGAGAAAACGAAAAACTTAGCGCAGGAAAACAGGGATAAATCCCCGTCGAGGGAAAGTGAAGGGGTTAACCAACTTCCGACACAACCCCCCACCCTCTCTATAACCCCCCCCAACAACCTCCCGCCGCCCTTCCAGAACGTCGACGCTTTCGGTAGCTTGCTCGGCGAAGAAATCGTTTCTTCGTGGAGAAGGAACATTGAGCACAACAGAATAACGCCAAAATCACCTTCTGCTTCTCTAGATGGGCCGGTGAAGAGCACCACGCCGATACACCAGGCCGACTCCACGGCGGAGAAGAGCTCCGCCTCCACGCCGCAACCCGTCGAACAAACGTGCCAGCCCTCGCCGGCGGAGAACCTGGTGAACGGCAACCCCAAGAGCCCACAGGAGGACAACAACAATCACCATGTTAGCAACAATAACATTCCCCTTACGGCGACGATGTGTGCGGTCAACAACTTCCTGAGGAACGACGAAACGTTGAAGAGCCCGTACCGGTTCGACGACCACAGATCGCCCTTCAAGTTCGCCGAAGACCTGGGCATGGGGCCGGGGTCCATGGTGGGGAGACTGGGCGAGAGCCTCATACCCAAAGGCGACCCCATGGAGGCCAGGCTGCAGGAGATGCTGCGGTACAACATGGACAAATACGCGTCGCAGAATTTAGATACTCTTCACATAGCCCGAAGGGTCAGGGAACTCCTCTCGATCCACAACATCGGTCAGAGGCTATTCGCGAAGTACGTCTTGGGTCTGTCCCAGGGAACCGTCTCCGAATTGTTGTCCAAACCCAAACCTTGGGATAAATTGACGGAGAAGGGTAGGGACAGCTATAGGAAGATGCACGCCTGGGCTTGCGATGAAAACGCAATTCTCTTGCTGAAATCTCTAATACCAAAGAAAGACCATTTTTCGTCAACAGGCAAATCAGAAGCGGGAATGCCGACGTTCGGTCGGCCAGAAAACGACCTTACCGACGAACGGCTGGCCCACATACTAAACGAGGCCAACCAATTCCAACAGATCAAGCAGCACCACCAACCGCCAGAAGACACGCACAGCAACGAGGACTCCAAATCGCCTCACGGATGCAGCAGCCCCTTCTCCAGGGACTCGTCGCTCAACAAGAGACTGAAGAAGTACGAGAACGACGACATATCCCAGGAGAAAGTCGTCAGGATCTACCAAGAGGAGTTGGCGAAACTCATGGGAAGGCGGATCGAGGATATGCGCAACCCCCGCGAGGGAGCGTTTCCTGGTATCTTCCTCCCACAACTCTTCAGCAACCCGATGGATAGGACACAGGAGGATATCCGTATAGCTCTAGACGCCTACCACCGCGAACTAGCCAAGCTAAACCAAGGACAAACGCCTTCGCAGATGCCTTTGAGTCTACTGGCGATCCAACAACAAGCCTTGGCTCACCACCAGCAACAACAACAGCAGcagcaacaacaacaacaacaccAGCACCAGCAAAACCCCAGCTCGAACGGTGGCGTTCAAGATTTATCCATACCAAAAGACAAAATGAAGATGATGAACGGAGTCATGGACGACAAAGAGAAAGACGATGACGCCATGTCGCGACATTCAGGATCCGCGTTCAGTCTCGTGAGGCCGAAACTGGAACCAGGCACTCAACCGACCAGCGGATCGACAGCTTCCAGCCCTCTGGGCAACTCAATTTTACCGCCGATGACACCCACCGATGATTTCTCGGCGTCTGCCGCCGCATCGCCTCTGCAGAGAATGGCCAGCATCACGAACTCTCTTATATCACAACCGCCCACGCAGCCGCATCATTCTACGAATAACAGGCCGCTGAAGGCGGTATTACCGCCTATAACCCAACAGCAGTTCGACCTCTACAACAATCTGAATACGGAGGATATCGTGAAGAAAGTAAAGGAGCAACTGAGCCAGTACTCGATAAGCCAGAGGCTATTCGGTGAGAGCGTTCTAGGCCTGTCTCAAGGCTCGGTAAGCGACCTCCTGGCCAGACCGAAGCCTTGGCACATGCTGACGCAAAAGGGACGAGAACCATTCATCCGGATGAAGATGTTCCTGGAAGACGACGGCGCCGTTCACAAGTTGGTCGCCAGCCAGTACAAAATAGCCCCGGAGAAGCTGATGCGGACGGGAGGATACGGCGGTGGTAAGATTGATTTAACCCAAAAGTTTCAAACAAATCTCAAAACAGTCCCGTTTTTTATAGCTTGCTCCTCGATCGGCAAACCAATGCCTCCGACGACGAAGATGCTGTCGGAAGCCGCCGGTCTCCTCAACAAGATGCAGGAATCCCAAAATATTCTGCCGCCGTCGCTCCAATTGGGACCGCCGCCGAGCGTCAATCCGCAACCGCCGCCGCCCATGCTTCTAACGCCTCCCGGCGGCCTTCCTCCACACCACGCCATGAGTTTGCAAAATTCCGAGCTGCTGAAGAAGACCAACCAGAGCCCGCATGGCATTCCACATTCCCCGATGGCGCAACAGCACGCCTCGCTTAGGAACATGCACCAGCACATGTCGCCGAGCGTGTACGAAATGGCGGCGCTCACCCAGGACCTGGACACGCAGGTCATCACCACTAAGATAAAGGAGGCCTTGCTCGCGAACAACATAGGACAGAAGATATTCGGCGAAGCCGTGCTAGGCCTTTCCCAGGGCTCAGTCAGTGAGCTCCTCTCCAAGCCGAAGCCGTGGCACATGCTGAGCATCAAAGGTCGAGAGCCGTTCATCAGGATGCAGCTGTGGCTGAACGACGCCCACAACGTCGACCGGCTGCAGGCCCTTAAGAACGAGCGCCGCGAAGCAAACAAGAGGAGACGGTCCTCCGGACCGGGCGCCCACGACAACAGCAGCGACACCTCCTCGAACGACACGTCCGAGTTTTACCACTCCAACTCGCCTGGACCCGGACCCCCGTCGGCGAAGAAGCAACGGGTGCTATTCAGCGAGGAACAGAAGGAAGCCTTACGGCTGGCCTTCGCCCTGGATCCGTACCCCAACGTCGCAACGATCGAATTCCTGGCCGGAGAGCTCGGCCTGTCGTCCAGGACCATCACCAACTGGTTTCACAACCACAGGATGAGGCTCAAGCAGCAGGTGCCGCACGGGATGCCCTCAGATTTACCGCCCCGGGATCAAACTGGCAGCCAGCAACCTTTTGACCCCGTCCAGTTTAGACTACTGTTAAACCAAAGATTACTCGAACTATCGAAGGAGAGAATGGGTCTGACCGGAGTGCCGTTGCCCTACCCCCCTTATCTTGCCGCCAACACGAACCTGGCCGCCTTGATCAGTCGCGGATTATTGCCCACCGGCGATATGGACCTCTCTGCGTTGAACAACGTAGTCAAGGAGCAGATGAGCGGCCTGGACCTTTCCATGACCTCACTGAAGCGGGAACCCGGCGACTATGACGACGAAGACGACGTGGAGAGCAACGTGGGATCGGAAGATTCCAACATGTCGGGGGGAAGCCTACACGGCGAGGTCAAAGTGGAGCCCAAAGAAGTGCCCGCCAGCCAGGGGAGATCGTCGCGACGGAAACCGGCGGCGCCCCAGTGGGTCAACCCCAACTGGGAGGAGGAGAAGGAGAAGCAGAACGCCGGCGATGAGGTAATCATCAACGGCGTCTGCGTGATGCAGGCGGGGGACGACTACGGGAGGAGGAATTCGGAGGAGACGATCCGCGTGGAACCGCAGGCGGTAATGGACAGATTCGACGACGACCAGAGCGACGCATCGTCTATAAGTAACGACAACGGACAACACGAGAAAAGTGACGAAAAGTGCGAAGACGACCAGGAGAACAACGAAGAGAGTGAGTTAAAAAACGAGGACAGTGGGAGTAAAATTGTTAAACAGGAGAACGAAGAGGAGAGGTGGGAATATTGA
- Protein Sequence
- MLCSCKQTRYGDENRSQINQLLEEVQRLQGCIAKLQETSMTQITRLEDQLEQKRQHILRLENKLDSQKDYDDLKREVSILRSDLANNPDGKSIELLLEKTKNLAQENRDKSPSRESEGVNQLPTQPPTLSITPPNNLPPPFQNVDAFGSLLGEEIVSSWRRNIEHNRITPKSPSASLDGPVKSTTPIHQADSTAEKSSASTPQPVEQTCQPSPAENLVNGNPKSPQEDNNNHHVSNNNIPLTATMCAVNNFLRNDETLKSPYRFDDHRSPFKFAEDLGMGPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKDHFSSTGKSEAGMPTFGRPENDLTDERLAHILNEANQFQQIKQHHQPPEDTHSNEDSKSPHGCSSPFSRDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGRRIEDMRNPREGAFPGIFLPQLFSNPMDRTQEDIRIALDAYHRELAKLNQGQTPSQMPLSLLAIQQQALAHHQQQQQQQQQQQQHQHQQNPSSNGGVQDLSIPKDKMKMMNGVMDDKEKDDDAMSRHSGSAFSLVRPKLEPGTQPTSGSTASSPLGNSILPPMTPTDDFSASAAASPLQRMASITNSLISQPPTQPHHSTNNRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDGAVHKLVASQYKIAPEKLMRTGGYGGGKIDLTQKFQTNLKTVPFFIACSSIGKPMPPTTKMLSEAAGLLNKMQESQNILPPSLQLGPPPSVNPQPPPPMLLTPPGGLPPHHAMSLQNSELLKKTNQSPHGIPHSPMAQQHASLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGMPSDLPPRDQTGSQQPFDPVQFRLLLNQRLLELSKERMGLTGVPLPYPPYLAANTNLAALISRGLLPTGDMDLSALNNVVKEQMSGLDLSMTSLKREPGDYDDEDDVESNVGSEDSNMSGGSLHGEVKVEPKEVPASQGRSSRRKPAAPQWVNPNWEEEKEKQNAGDEVIINGVCVMQAGDDYGRRNSEETIRVEPQAVMDRFDDDQSDASSISNDNGQHEKSDEKCEDDQENNEESELKNEDSGSKIVKQENEEERWEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01368896;
- 90% Identity
- iTF_01310214;
- 80% Identity
- iTF_01310214;