Rfun000420.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rosalia funebris
Gene Symbol
ARID5B
Assembly
GCA_037954035.1
Location
JAZFAV010000001.1:6423161-6428453[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9e-26 6.3e-22 79.5 0.1 2 89 148 233 147 233 0.95

Sequence Information

Coding Sequence
ATGTTTTTTTCAAAACGTGTTTCGAACGAGGACAGCGGCAACAGTCCTAATGTGGTAATACTGAGTTATCCCAGGTATTGCCGATATAGGGGCGCGATGAAAAGACTAGAAGGCGGAGAAAGTACAtctgtacattttaaattacttagCGCCCTCGGCGCTTTTTACGTGATCAATCCCAACACGAGAGTACTTTTCTGCAGGGACACCTTCGACTACCCCGAACTGGAAGGCCACGAGTTGCTCTGCAACCACCTCGCCCCCAAACTAAAGGGCAGACCGAGGGGCAAACGCAAAAAACGCAGCGTCTCGCCAGGATCGGAGAGTAACGAATCAGAATCGTCTATTACGAATGGATACAACACAAGGGCTGAAAATAGACTGCGTTGCGATGCGACCATCGCCAGGCGACGTAGCACTCGCTGCCACGAGAACAACGAGAACAAGGAATTCGTCCGAAAGCTCGCCGCCTTCATGAAGTCCAACCACACGCCCATAGGCCGAATCCCGTCCCTAGGCTACAAAGAACTGAACCTTCACGAATTCTTCACAAAAGTACAAAAACTGGGCGGTTACGATTCCGTGACCACCAATCGCCTGTGGAAGTCGATATTCGAGGATATGAACGGCCATCAGAACAGTACAAGCGCTGCGACGATGATCAGGCGCCATTACGAGAGGTTCCTGCTGTCGTACGAGCGACACATCAAAGGCGAGGAGTACAAACCGTTACCCGTATCCGAAAGGAGAAGACTGAAGACCAAACGCGGTAGCAGCAGCATGAGCGACGCAGAATCGAGCAGCGGGGACGCCACCCCAGCCCCTTCGACTTCGAGGAAAACCTCCTTCTCGGGACCCCCGGCAGAGTCCAAGGATAACGCCAAGGCGGAAGGGAAACCATCGTCGCTTAGAAGCGTCCGCGTCAAAACCGAAAGACAGAAGGAGAAACCACCCGGCAACGAGAAGGTGGGCGCGGAAAATAACAATAACGAAAGCGAAGGCGTTGGCACGCACATCGATGACGCGGTGACGGTGAGGCTCGATCAGCCGGTGGTGGTGAAAATGGGAAAACTTTCCGGCGAAATAGAAGCTTCCACGCTGGAGATGAATTTCTTGCCGATACAAGTTGATTATACCTCGGAAACGGACCCGGTATTTGCGGTAATGAAAGCCGAGATAATCCCGATAACGTCCGAAGTTAAGCCCGTCCTGCCGGACGTCTCCTGCACCAAGGCGGAAATCGTGCCGATCGAGCCTGCCCGTGACCCGGCGATCGTCTGGAAGCCGGTCGCCATCAAGTCGGAGCCGGAGCCGGAACCGGTCGCGATCAAGTCGGAACCCCCCGAGAGGGTGACGGACCCTCCAACGTTGGTTGCGATGCCAATCGCGCAGAAAACCTCGCCGGATAAGGCTGTGTCGCCCGTGCAAGGTAAAGAGAACATCCCGGTGGCCAACACCGGCTGTGTCGCCACGAACAACAGCCTGGACGTCGCAGAGGTGCCATACAAGCCGAAGCCGACCGAGACTGTAGGCGCGGAGCCGGATGCGTACAAGAACCCGTTCATCCACGAGGTGAAAAGGCGAAAACTCGACATCCTGAAGGAGGGCGGCCTGGAGGTAACCCCGGTCCGATCGCCGTCGGCGAAAGACGGTAGGCCGTCGGTCATCCAGCAAATAACCGCCTCGCCGGCGCAGATGATCGTCTCCAAGCCGAACACGGCGGAGATAATGCCGCCTCCCTTGCCCCCGAGGCGTGGGCACGTAATGGCACAACAACCGCTGAATTTCAGCCGGCTGAAGACGCCTATCAAATCCTTCCCGTACGTCAACGAGTCCATCGCCCCGCCCAAAGTCGTCCAATCCAAGTCGATCTACTCCTATTCGGAGAACACCATCTACGGCAACCCGAAGGACATCCTGTCGCCGACGGTGAAGAGCGCCGCGCACGCCGCCCCCAAATTCACGACAGGCAGCGTTCTCAGGCAAAACGGAAGCGACCCGGTGGACCTCTCCGTGAACAGCCAGCAGGTGGTGGAAATCATGCGCGTACCCCAGTCGAGCAGCTCCAGATCGCAGAGCCCCTACAATAGGGACGCGGTCTCGATGAACCCGTACAAGGCGGCCGCCTCGCCGTTGATGGACGGCAGGCGGCTGGGGCCGAACCTGGAGATCACTCTCGTGGGACCAAATAATAGAAACATCACCTCCAGCCCGTTCAATTTCCCGACGCCGCCACTCCCGAGCCCCGTCCCCACTCAGTACCCGCAGCACAGGCGCGTACCCTCGCAGTACTACCCGCCCAACATGACGAGGAAGGACGAGAACGGCCACGGGAAGTACAAGCCTCTCCTGCCGAAACCCAGCGGGGACATCAGCATTCCGAAGCCCTACGCGGGTAAACAACCAGAACCAAACCAACAACTGCCTCACGCGCAAGCGCCCGTCACGCACTACCAGAACCCAAATCCTAACCAGAACCCGAACCCTAACCAGAATCCCAACCTCGACCAGAACCCGAACCCCAACCAGAACCTGCCTCCCTTCTCCCCCTACTTGGCGCAGCTGTACCAGGACAACAAAGGGGCGCACCAGTACCTGCCCATGCTGGACCCCGCTATGTATTACTCGGCGGCCATGCAGAGCCTGTTCCCGAACGTGGCATCGACGTCGCAATTAAACCCGGCGCTGCCCATCCTGCCCGTGCCCTCTCCCGAGCAGCTCAAGTTCTATGCGGAGCTCAACGCTCGCCTCAACTTCCCCTTCGAGCTGTTGCAGGGGAGGAATCTGCCAGAGAACAATAATAACAACTTCAACAAGCCGTAG
Protein Sequence
MFFSKRVSNEDSGNSPNVVILSYPRYCRYRGAMKRLEGGESTSVHFKLLSALGAFYVINPNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSITNGYNTRAENRLRCDATIARRRSTRCHENNENKEFVRKLAAFMKSNHTPIGRIPSLGYKELNLHEFFTKVQKLGGYDSVTTNRLWKSIFEDMNGHQNSTSAATMIRRHYERFLLSYERHIKGEEYKPLPVSERRRLKTKRGSSSMSDAESSSGDATPAPSTSRKTSFSGPPAESKDNAKAEGKPSSLRSVRVKTERQKEKPPGNEKVGAENNNNESEGVGTHIDDAVTVRLDQPVVVKMGKLSGEIEASTLEMNFLPIQVDYTSETDPVFAVMKAEIIPITSEVKPVLPDVSCTKAEIVPIEPARDPAIVWKPVAIKSEPEPEPVAIKSEPPERVTDPPTLVAMPIAQKTSPDKAVSPVQGKENIPVANTGCVATNNSLDVAEVPYKPKPTETVGAEPDAYKNPFIHEVKRRKLDILKEGGLEVTPVRSPSAKDGRPSVIQQITASPAQMIVSKPNTAEIMPPPLPPRRGHVMAQQPLNFSRLKTPIKSFPYVNESIAPPKVVQSKSIYSYSENTIYGNPKDILSPTVKSAAHAAPKFTTGSVLRQNGSDPVDLSVNSQQVVEIMRVPQSSSSRSQSPYNRDAVSMNPYKAAASPLMDGRRLGPNLEITLVGPNNRNITSSPFNFPTPPLPSPVPTQYPQHRRVPSQYYPPNMTRKDENGHGKYKPLLPKPSGDISIPKPYAGKQPEPNQQLPHAQAPVTHYQNPNPNQNPNPNQNPNLDQNPNPNQNLPPFSPYLAQLYQDNKGAHQYLPMLDPAMYYSAAMQSLFPNVASTSQLNPALPILPVPSPEQLKFYAELNARLNFPFELLQGRNLPENNNNNFNKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-