Rfun029295.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- Arid4a
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000016.1:40814440-40827654[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-26 7.6e-23 82.5 0.1 1 89 84 169 84 169 0.95
Sequence Information
- Coding Sequence
- ATGTGTGTTCAGTTCACATTATCGGGGATTTATACAGTACCCAAGAAGGAAGTAACAGAGTTTAATAGAGAATTAGGAGAGAGTGCTGAAAGTTCAATTTTAGCTGAGGCTGTACAAAAGGCTCTTAAATTCCTCAACAACAATGAATTGCCAGCACATTGGGAAAGAAGTTCATTATTCAATTCACAATCCTTAGAAAGTGAAAGTGATGAAAATTTTACTGAtacATCTGATGATGAACCCTGTGAAGAAAAAGATAGATTTGTAGCTcagttatataaatttatggatGAAGCTGGCACACCATTAAATAAGACTCCGACTATTGCGGCAAAGGACATTGATCTTCACCGCTTGTTTCGTGTGGTCCAGAAATTGGGAGGTGGAAATAGAGttacaaatcaaaataaatggagATCAGTAACGTCCAGATTACACCTACCAAataatcaaaatacatttaatcaagtaaaatatgtttataagaaATGTTTAGCCAGTTATGAAACTTTCTATCGAACTTTGGGAGTGACTATGTTAAACCATACACGATCAAATAAGAAAAATCGTGGTAGAAGTCTCATCAGAGACAAAGATAGAAATACACCTATTAATAGCCCTAGACTTGAGAAAGAAGAGGAGGTTCTTGAAAAACTTGaagataaaaaagaaacaacaatTCAGCTCTCTTCAGAtaatcttaaattaaagagaaaggatgttaaagaagaaaagaaaaagattAACATAGAAATAAGTGATACTAATAGTAGTGATACAAATGATCAATGTGAGCTGGTGGCTACTACATCAAAGGAATCTGGTAAATCTAAAAGAGAACGAATTGAAAGTAAATCTCTTAGAGACAAAAAACTTAAGGTGTCACAGGAGAAAGTTAAGACTCTTATTGAAAAATTTGAAGAGCATCATAAAAAGGAAGATGAAGAAAAGGGACAACAAACACGTTCAAAATCGGTATCAAAATCAAAAGAAGCTCCCCTCTTAGATAAGAAAGTAATTGCCAAAGAATCCAAAACCCTCATCAAATCAAACAGCAAAAAAGCACCTGAAGAAGAGAAGAAAAGGGGTAGAAAACGAATTTTGGATGATAAAATTTTGTCCGATATTTTGGACCCCTCagctataaatattaatattggtgATAAATTAAAAGTGTATTATGGCCCTACACATGAATCTAAGGTAACATATGAAGCTAAAGTTATTGAAATTGATAAGGATCAAAGCGGACCTGTATATTTGGTACATTATACTGGATGGAACACTAGatATGATGAATGGATACAACCCCAAAGAATTGCCGAAAATCTTAGCGCTGCAACAAAAGCTAAAAGATTAAAGCAGACGAATAAtacttcaataaataaaattaataatactggAAAAGCAGCAGTCAAACGAGGTAGAGGATTATCTATTACTGGACGTACTACAAATACGGAGACTCCTAGATCTACTACACCATCAAGTCTTGCTTCTTCCAACAGTAGGACTAAGAGTCCTGCTACGAGGTCTGTTAGCAGAGCGATGAACGAAAACAAAAAGTTAGCATTGCGTTTAAAAGACATGTGCCAGGACGAactttataagttaattaatatatcacatgAAGCAATTCTGGTTTCACCTTCTGATCTGGAATCGGAATATAGTGATGATGATGTAGGTTCTGATGCAGATGTACTAACCTTCGATAACGGGAATTATATGATAATAGAAGATACATTTAGTGATACCGAGCTTGATTGGGATTCTGATGATGATGTTCCACTAGCAACCATTAGGACAAACATTATTCGTCAAAAATAA
- Protein Sequence
- MCVQFTLSGIYTVPKKEVTEFNRELGESAESSILAEAVQKALKFLNNNELPAHWERSSLFNSQSLESESDENFTDTSDDEPCEEKDRFVAQLYKFMDEAGTPLNKTPTIAAKDIDLHRLFRVVQKLGGGNRVTNQNKWRSVTSRLHLPNNQNTFNQVKYVYKKCLASYETFYRTLGVTMLNHTRSNKKNRGRSLIRDKDRNTPINSPRLEKEEEVLEKLEDKKETTIQLSSDNLKLKRKDVKEEKKKINIEISDTNSSDTNDQCELVATTSKESGKSKRERIESKSLRDKKLKVSQEKVKTLIEKFEEHHKKEDEEKGQQTRSKSVSKSKEAPLLDKKVIAKESKTLIKSNSKKAPEEEKKRGRKRILDDKILSDILDPSAININIGDKLKVYYGPTHESKVTYEAKVIEIDKDQSGPVYLVHYTGWNTRYDEWIQPQRIAENLSAATKAKRLKQTNNTSINKINNTGKAAVKRGRGLSITGRTTNTETPRSTTPSSLASSNSRTKSPATRSVSRAMNENKKLALRLKDMCQDELYKLINISHEAILVSPSDLESEYSDDDVGSDADVLTFDNGNYMIIEDTFSDTELDWDSDDDVPLATIRTNIIRQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -