Rfun055089.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- grh
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000036.1:4989808-5012836[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-63 3.3e-59 201.7 0.1 29 221 449 636 433 638 0.94
Sequence Information
- Coding Sequence
- ATGAGTGATGACACTGTCAAAGACGCGTACACAATCGCGATCTTCCACGCTCTTCGCAAACTTTATGCAAACGGAGATGCGCTCGTCGCGTCGGGGTTAGTCGCTCGATCCAGCATTAAAATCCCCTCAGAGTGCAGGCGAACAGGTCCGAGCGTCGATAAATTAGCACAGTATAGGAAGGCGAGTTCCCAGGCCGGAGGCATACTAACGTCCCAGCTGAAGGCAACCAATGGCTTGGTGAGTGGGGCGGGCTTAGAGTTGCCGACCCCGCCTTTGAGTAGTGCCGGTCAGCTAAGCTCGCAAGAGTTGCAaggtttatttattaaccaacaCATCGTCAAAAGGGAACCGGAGGACTTAAGCCACCACCGTAAACTCGATTGTAGTTCCCCGAGTTCCGGTAGCCTGGACGGCACCATAATTATCCCTAAGCAGTCTCGAGCAAAGGTCGTGCTGGTGTCCTCGGCCGGTGGCCAGCCCGGAGACTTGGTGGTGGACGTCAACTCGATCAAGGACGAGAGCCATCGCGGCCTCAACTCCCCGCAACACGGCTCTCGGTCCATTAACGGAACCCCGACCTCGACGCACAGCAGCCTTCTGGCGGACGGCTCCAACACGGGGCCCATCGAATTCATCTCTGCGGATGGCCTCAAACCAGCGATGTACACGACGCAGATATTCGCCTCCATGAGCAACGCGCCTCAcggcggcggcggcggcggaAGCGGCACCCCCTCGCCCATCCCCTACACCGATCACGTTCAATACAGCACCCAGAGCTCGATGAGCGGCGGCGGGGTTGGTGGCAACTCCGCCATCTACTCCTCCACCGGCAGGCCGAGCAGTTCGGCGGCGTTCTCGGTGTCGGACCCCTATTACCGCGAATATTTCACCACCGTGACCTCCGGGGCGGGCACTCCCGAGCCCGTCTACTCCAGCCAATTGAGGCAATCGCAGCTGGGCTACGGCGAGGAGGCAGCGAGCGGCGGCGCAACGGCGAGTTTCGTCGAAAGATACGTGCGCCAGTCGGCGTACCATGGGAAGGGCGTGATCGCCGCCGCCACGGCTGCCGGCCTCACCGTCGACCTCCCCAGCCCGGACAGCGGAATCGGCGCCGATGCCATCACGCCGCGCGACCAGAACACGCTGCAGCAGTCCTTCGACTACACGGAACTATGCCAAACGAACTCCACGCTCCTGGATCCGCTATCCCTCTCTCAGAGAAGCAACAGCAGCTCCCAGTCCCCGGGGGCGCAGCCCACCAGCAGGAGCCGACCTTGGCACGACTTCGGCAGGCAGAACGACGCGGACAAGATACAAATCCCCAAAATattttcACCGGTCGGCTTTAAATATCACTTGGAGACGCCCATATCGACGTCGCAACGGCGCGAAGACGACAGGATTACGTATATAAACAAGGGACAGTTCTACGGGATCACGTTGGAGTACATACCGGACCCCGACAAACAGCTCAAGTCGCAAACTGTAAAGAGCATTGTTATGCTGATGTTCCGAGAAGAAAAAAGCCCCGAAGACGAAATTAAGGCCTGGCAGTTCTGGCACGGGAGGCAGCACTCCGTCAAGCAGAGGATTCTCGACGCAGATACAAAAAATAGTGTAGGCTTAGTCGGTTGCATAGAAGAAGTGGCACACAATGCGATAGCGATATACTGGAACCCCATGGAAAGTCCTGCAAAGATAAACATCGCGGTCCAGTGTTTGAGCACGGATTTCAGCAGTCAAAAGGGCGTCAAAGGGCTGCCGTTACACCTGCAGATCGACACGTACGACGATCCCAGAGATTCCACCGTTTTTCACAGGGGTTACTGCCAAATCAAGGTTTTCTGTGATAAAGGAGCAGAACGGAAAACAAGAGACGAAGAGCGACGGGCGGCCAAGCGTAAGATGACAGCCACTGGAAGGAAGAAGTTGGACGAACTGTACCACCCGATGTGCGAACGATCTGAATTTTACACGATGAGCGACCTGACCAAACCACCTGTGCTGTTTTCTCCAGCCGAAGACATCGACAAATTGACGTCGATGGAGCTGCAGGGTTTTTATTCTCATGAAGACGGTTCGTTGAGTGGGCCTGTCGACCACGTGAAAACGGGATCCCCTTTCCTCTTGCACACAGCCTCAAAACCTCCAACAACGCCTACACTTAAATTTCACAATCATTTCCCGCCCGATGCCGATAAAAAGGataacaatattttagacgGTAGTTTAACGACCGATGGAAGTGTGTTTTCGCCTCCACTGAAACGGGCCAAACTGATGAGTGGTGGTCCGGGCAGTGCCGGGCCACCACCTTTAAACGAGAGGGTTATGTTGTATGTTCGCCAGGAGAACGAAGATGTTTATACACCTTTGCATGTTGTTCCTCCCACCACAGTAGGCCTATTAAATGCGATTGAGAATAAGTACAAAATTAGCGCTTCAagcataaataatttgtatcgCAAAAACAAAAAAGGCATTATAGCCAAGATTGATGATGATATGGTAGCTTACTATTGCAATGAAGATCTATTCCTATTAGAACTGAAGCAATTGGACGAGGACCTCTTTGATATAACGTTTGTGGAACTTATGGACCACTAA
- Protein Sequence
- MSDDTVKDAYTIAIFHALRKLYANGDALVASGLVARSSIKIPSECRRTGPSVDKLAQYRKASSQAGGILTSQLKATNGLVSGAGLELPTPPLSSAGQLSSQELQGLFINQHIVKREPEDLSHHRKLDCSSPSSGSLDGTIIIPKQSRAKVVLVSSAGGQPGDLVVDVNSIKDESHRGLNSPQHGSRSINGTPTSTHSSLLADGSNTGPIEFISADGLKPAMYTTQIFASMSNAPHGGGGGGSGTPSPIPYTDHVQYSTQSSMSGGGVGGNSAIYSSTGRPSSSAAFSVSDPYYREYFTTVTSGAGTPEPVYSSQLRQSQLGYGEEAASGGATASFVERYVRQSAYHGKGVIAAATAAGLTVDLPSPDSGIGADAITPRDQNTLQQSFDYTELCQTNSTLLDPLSLSQRSNSSSQSPGAQPTSRSRPWHDFGRQNDADKIQIPKIFSPVGFKYHLETPISTSQRREDDRITYINKGQFYGITLEYIPDPDKQLKSQTVKSIVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAIYWNPMESPAKINIAVQCLSTDFSSQKGVKGLPLHLQIDTYDDPRDSTVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPMCERSEFYTMSDLTKPPVLFSPAEDIDKLTSMELQGFYSHEDGSLSGPVDHVKTGSPFLLHTASKPPTTPTLKFHNHFPPDADKKDNNILDGSLTTDGSVFSPPLKRAKLMSGGPGSAGPPPLNERVMLYVRQENEDVYTPLHVVPPTTVGLLNAIENKYKISASSINNLYRKNKKGIIAKIDDDMVAYYCNEDLFLLELKQLDEDLFDITFVELMDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00395018;
- 90% Identity
- iTF_01289512;
- 80% Identity
- -