Rped010777.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- stc
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000004:144182963-144212970[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 1.9e+04 -4.1 1.7 15 18 426 429 425 430 0.78 2 17 2 1.9e+04 -4.2 1.6 15 19 453 457 452 457 0.81 3 17 0.014 1.3e+02 2.8 0.3 4 10 486 492 485 493 0.97 4 17 4.8e-05 0.45 10.7 16.3 4 19 500 515 498 515 0.94 5 17 8e-05 0.77 9.9 14.4 3 18 553 568 551 569 0.91 6 17 2 1.9e+04 -5.2 3.3 8 13 574 579 573 580 0.79 7 17 1.4 1.3e+04 -3.6 0.8 6 10 598 602 597 602 0.85 8 17 1.9e-09 1.8e-05 24.7 13.5 1 19 608 626 608 626 0.98 9 17 5.1e-07 0.0048 17.0 15.9 1 19 667 689 667 689 0.88 10 17 0.011 1.1e+02 3.1 9.4 1 11 729 739 729 740 0.96 11 17 1.6 1.5e+04 -3.8 0.8 4 10 744 750 743 750 0.69 12 17 8.6e-11 8.2e-07 29.0 12.3 1 18 756 773 756 774 0.97 13 17 0.36 3.4e+03 -1.7 1.0 11 18 803 813 803 814 0.76 14 17 2 1.9e+04 -6.3 13.4 1 19 813 831 813 831 0.75 15 17 0.49 4.7e+03 -2.2 1.2 9 14 849 854 847 861 0.77 16 17 1.7e-05 0.16 12.1 12.1 1 15 867 880 867 892 0.87 17 17 0.81 7.8e+03 -2.9 15.7 1 18 898 917 898 918 0.84
Sequence Information
- Coding Sequence
- ATGTCGAACTGGGAGAGAGGGGAAGGAGGCGGGAGCTCATATGAGGGCTATGGTAATAACTATGGGAATCATGGGAGAGGAGAAGGCTCACAGTTCTACTACCAGCAGCCTATTTATAATTCAGTAATGCATAGTGCTCAACAAGTGTACAGGAATCCTTATCAACAGCACTATCAACCAAATCCTACGTCTGCCCAAGGATTTATCACAATCTATCAACAACACCAACAGCGGGAGCAGCACCAACAGCGGGAGAAACACCAACAAAGGGAGAAACACCAACAGAGGGAGAAACACCAACAGAGGGAGAAACACCAACAGAGGGAGCAACACCAACAGAGAGAGCAGCACCAACAGAGAGAGCAACACCAACAAAGGGAACAGCACCAACAGCGGGAGCAGCCCCAACAGAGGGAGCAACACCAGCAGAGAGAGCAATACCAACAGAGAGAGCAACACCAACAGAGGGGGCAGCACCAACAGGGGGAGCAACACCAACAGAGGGTGCAACACCAGCAGAGAGAGCAGCATCAACAGAGGGAGCAGCACCAACAGAAGGAGCAGCACCAACAGCGGGAGCAGCACCAACAGCGGGAGCAGCACCAACAGCGGGAGCAGCACCAACAGCGGGAGCAACACCAACAGCGAGAGCAACACCAACAGAGAGAGCAACACCAACAGAGGGAGCAACAGCAACAACAAAATCAAGATTATGATAATAATAGCCACAATTATCACATTCCCACAATGGTTTTTCCATCATCCAACTCCAATGCAGGGGTTGGAGAAGTGAAGCAAGTTAAGAGGAAAACATCTGAGCAGAGTAGAAGTGGGAGTGGACGTTTTGGAAATCGGAGCTTGGGAGCTGTGCCTAAACAAAATTCTCCTTTTGATTCGAACAAAAAAGGCAATTACAACAAGAAATTGAGCCAAACACAACTGCATCAAACAACTCAGCAAAGTTGGGCAGCAATTCCGAATGATGACATCAATGGAGAAGGAACAAAAACAGGCGTCAGCGACCAAGGTAGATCTATTGGTAATAAACGTGGCAAGGGATACACCCCACGAAATACCAACAGAGCCAATAATAACCGGAGAGAGAAACCTGGTGTGTTGAGGAGTTCGCACTTGAAGGACTGGAGGTCTAAGGGCAACAACGGTACTTCAAATGAGGAATGCCAACGAGATCGGCTGACATGGCAACTGTACTCAGGAGGACTTGAGTGTTTGGTGTGTTGTGAGAGATTGCGGCAGTCAGACAGAGTGTGGTCCTGTCCGGAATGCCACCACATATTACATCTCAAGTGCACTGTGCGATGGGCCTCCTCTTCAAGGGATGATAATGGGTGGCGTTGCCCAGCGTGCCAAAATGTCACAGACACTATTCCTACCGACTACAAGTGCATGTGTGGCAAGGTGACAGATCCCCAATGGGTGCGTGGAGAGACGCCTCATACATGTGGGCAAGTGTGTGGGAAGGATCGGGGTTGCCCACATCCCTGTACACTTCTCTGCCATCCTGGTTCTTGCCCTCCCTGCTCTGCTAACATTGACAGGTTTTGTGGTTGTGGGAGAACAAAACAGGTTGTGCAGTGTTCTTCTAAAGTTGAGTTGAGCTGTGATGCTATCTGTGATAAAGTGCTTAATTGTAAAGAACATAACTGCGAACGTGGTTGTCATTCAGGGGGTTGTGATCCCTGCAATAAAACAATTCACCAAAAATGCCATTGTGGAAGAGAGGAGCGATATGTGCCTTGTGATGGAGATGATAGAGGAGTTAAGTATAGCTGCAATAAGCCTTGCAATAATGAGCTGTCTTGTGGAAGCCACAACTGCAGCCAGTTCTGCCACCCTGGTGCCTGTCCCCCCTGCAGCCTCTCTCCCTCGCTCATAGGCAGCTGCCCTTGTGGCAAACTCTCACTCGCCCCTAGCTCTCGGCTTCTCTGCACGGACCCCATTCCTCTCTGCGGGCAGGTCTGCGGCAGGCAACTCTCCTGTGGCCCGCCAGGTAAGAAGCATAAATGTGCTGTGAAATGTCACGAGGGTGAGTGCCCTCCCTGCCCTGAAGTAACATCGGCTATGTGCCGCTGTGGTGCTATGATAAAGGAGGTACCGTGTGCTCTTCTACAGTCTAGCCCTCATGATCCACGCTGCTCCAAGCGATGTACCAAGAAAAGGAGTTGTGGGAAGCATAAATGCAACCAAAATTGCTGTATTGAAATAGAGCACTTCTGCCCTCTTCCCTGCAATAAGATGCTTAGTTGTGGGCGCCACCGCTGCCAGGAACTCTGCCACAGAGGCAATTGCCGACCCTGCCTAGCAGCCAGTTTTACAGAATTGAGCTGTGAATGTGGGAAAAGTGTGATTTACCCCCCTGTCCCATGCGGGACGAAAGAGCCCGAATGTGATGGGCCATGTTCTCGAGCCCACCCCTGTGGCCATCCCCCTACTCACAACTGCCATTCTCAGCCCGACTGCCCACCCTGTACTCAACTCACCACCAAATACTGCTTTGGAGCTCACGAACTTCGTAAAACAGTGCCTTGCCATATGGGTGAATTTTCATGCGGGCGGTCTTGCAATAAGCAGTTGGAGTGTGGGCATTGGTGCAAGCGGCTCTGCCATGATGGGCCTTGCATCGGGCCAGACTCCCGCTGTACTCAGCCCTGCCCGATCCCTCGCACCACCTGCTCCCATCCATGTGCGGCTATCTGCCATCCTCAAACTCCTTGTCAACCACACCCATGTAATGCTAAGGTCGAAGTGAGATGTGAATGTGGAAGAAGAGTGGTTACAAGAAGTTGCTCGGAAAACAACTCTGAATACCAGCGACTGGCTACAGCACAGCTTGCCTCTCAGATGGCTGATGTTCGCCTTGGCAAAACAGTTGAACTTAGAGCGACTTCTAACAAACCAGTCTTAAAACTTGAATGTACAGACGAGTGCAGATTGGCTGAGAGGAACTTGCGCCTGGCAATTGGGCTCCAGATTTCCAACCCAGATCTCTCGTCAAAATTGAGCCCACGCTATTCTCCATTCCTCATGTCCTGGGCCAAGAAGGATCCCAAATTTGCACAGAATATCCACGATAAGCTAACTGAAGTTGTACAACTCGCAAAAACGTCTAAACAGAAAAGCAGAAGTTACTCATTTCCATCAATGAAGAGTGAGAAGAGGCAATTTATCCACGAATACAGTGAGCACTTTGGCGTTGAGAGTGTAGCCTATGATGCCGAGCCCAATAGGAATGTAGTCGCTACTGCTTACAGGGATAAGTCATGGCTGCCAAGCTATTCCGTTCTAGAGATGTTGGAACGAGCAGCGGGCAAGAGGAAAGTTCCCTCCCTTCTTCCATCATTGAAAAAGGACAGCAAAGAGGAAAGTGTGATGGTTCCTGTGAGATTGAGGCCCAAATCGGAGGAATTGAAGGAAGAAGAAGCAAAAGGCGATGAACCACCCCTCATTGACTATTTTGACTACGTCAATCCATCCCAGTGA
- Protein Sequence
- MSNWERGEGGGSSYEGYGNNYGNHGRGEGSQFYYQQPIYNSVMHSAQQVYRNPYQQHYQPNPTSAQGFITIYQQHQQREQHQQREKHQQREKHQQREKHQQREKHQQREQHQQREQHQQREQHQQREQHQQREQPQQREQHQQREQYQQREQHQQRGQHQQGEQHQQRVQHQQREQHQQREQHQQKEQHQQREQHQQREQHQQREQHQQREQHQQREQHQQREQHQQREQQQQQNQDYDNNSHNYHIPTMVFPSSNSNAGVGEVKQVKRKTSEQSRSGSGRFGNRSLGAVPKQNSPFDSNKKGNYNKKLSQTQLHQTTQQSWAAIPNDDINGEGTKTGVSDQGRSIGNKRGKGYTPRNTNRANNNRREKPGVLRSSHLKDWRSKGNNGTSNEECQRDRLTWQLYSGGLECLVCCERLRQSDRVWSCPECHHILHLKCTVRWASSSRDDNGWRCPACQNVTDTIPTDYKCMCGKVTDPQWVRGETPHTCGQVCGKDRGCPHPCTLLCHPGSCPPCSANIDRFCGCGRTKQVVQCSSKVELSCDAICDKVLNCKEHNCERGCHSGGCDPCNKTIHQKCHCGREERYVPCDGDDRGVKYSCNKPCNNELSCGSHNCSQFCHPGACPPCSLSPSLIGSCPCGKLSLAPSSRLLCTDPIPLCGQVCGRQLSCGPPGKKHKCAVKCHEGECPPCPEVTSAMCRCGAMIKEVPCALLQSSPHDPRCSKRCTKKRSCGKHKCNQNCCIEIEHFCPLPCNKMLSCGRHRCQELCHRGNCRPCLAASFTELSCECGKSVIYPPVPCGTKEPECDGPCSRAHPCGHPPTHNCHSQPDCPPCTQLTTKYCFGAHELRKTVPCHMGEFSCGRSCNKQLECGHWCKRLCHDGPCIGPDSRCTQPCPIPRTTCSHPCAAICHPQTPCQPHPCNAKVEVRCECGRRVVTRSCSENNSEYQRLATAQLASQMADVRLGKTVELRATSNKPVLKLECTDECRLAERNLRLAIGLQISNPDLSSKLSPRYSPFLMSWAKKDPKFAQNIHDKLTEVVQLAKTSKQKSRSYSFPSMKSEKRQFIHEYSEHFGVESVAYDAEPNRNVVATAYRDKSWLPSYSVLEMLERAAGKRKVPSLLPSLKKDSKEESVMVPVRLRPKSEELKEEEAKGDEPPLIDYFDYVNPSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -