Rped001282.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- pnr
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000002:77014551-77045633[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 3.8e+03 -2.3 0.0 9 14 83 88 82 92 0.72 2 3 2.1e-18 6.6e-15 54.5 3.2 1 34 110 142 110 144 0.97 3 3 1.3e-18 4.2e-15 55.1 5.7 1 35 169 202 169 203 0.98
Sequence Information
- Coding Sequence
- ATGCGCCCGCGCCTCAGTTTGCTTCGATGGTGGCAGAGATGCGATAAGCCAGGATTGATTACCATGTTTCCAGGTACCAATACAATGGCATCCACAAGTTACATGGAAACAACAAGTCATAATGTGTACAGTGGGAGCGGTAGTGGGGGAGGGCCAGTGTACGTGCCGCCAAGGGGTTGGCAGGACTACCAGGGGCACCAACACCAACACCAGATACCTACCCCTCCCAACACCTTCTACCCTGCCACCGTCATGTGGAGGTCATATGAACACCACTACAGGACCCACTATGACTCGAGCGGCATGGATATGGGAGAAGGACGAGAGTGTGTAAACTGTGGAGCAATCAGCACCCCTCTATGGCGGAGAGATGGGACTGGCCACTACTTGTGCAATGCTTGTGGCCTCTATCATAAGATGAATGGCATGAACAGGCCGCTAGTAAAACCTGTCAAAAGACTTGTCAGTACACATTCGACGGCAACCCGGAGACTTGGCCTCTGTTGTACGAACTGTGGTACAGGAACGACAACACTATGGCGGCGGAACAATGAAGGAGAGCCAGTCTGCAATGCTTGTGGACTTTACTTCAAACTTCACGGAGTCAACAGGCCCCAGAACATGAGGAAGGATGGTATTCAGACAAGAAAAAGGAAACCCAAAAAATCACCTCAGGAAAGTGGGAATTCCAATAACCAAAGCAGCCCCCATCAAGATACAACTAAGCTGATTGGAAATGGAAATTCCGAGAGACCGTATTTAGGACATACCTCTCTTTTGGTCGGGAGCAACAACATAAAAAGTGAACCTGGGCCAGCACACTATAGTGAGCATTTAACAGAACATTATTATCACAATCCACAAATGTACAACATGCAGCATACAGATTACCTAGGAAATAAAATTATGGCATCCTCATAG
- Protein Sequence
- MRPRLSLLRWWQRCDKPGLITMFPGTNTMASTSYMETTSHNVYSGSGSGGGPVYVPPRGWQDYQGHQHQHQIPTPPNTFYPATVMWRSYEHHYRTHYDSSGMDMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPVKRLVSTHSTATRRLGLCCTNCGTGTTTLWRRNNEGEPVCNACGLYFKLHGVNRPQNMRKDGIQTRKRKPKKSPQESGNSNNQSSPHQDTTKLIGNGNSERPYLGHTSLLVGSNNIKSEPGPAHYSEHLTEHYYHNPQMYNMQHTDYLGNKIMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764343;
- 90% Identity
- iTF_00757810;
- 80% Identity
- -