Basic Information

Insect: Riptortus pedestris
Gene Symbol: -
Assembly: GCA_019009955.1
Location: GWHBAZH00000002:81593786-81614220[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0011 0.062 13.9 1.3 2 23 713 736 713 736 0.92

2 15 0.019 1.1 10.0 1.8 3 22 798 817 797 820 0.89

3 15 0.47 27 5.5 1.4 1 23 853 877 853 877 0.97

4 15 0.00011 0.0061 17.0 1.1 1 19 978 996 978 998 0.97

5 15 0.05 2.9 8.6 0.3 2 23 1031 1053 1030 1053 0.94

6 15 2.4e-05 0.0014 19.0 1.0 1 23 1088 1110 1088 1110 0.98

7 15 1.4 80 4.1 5.3 1 23 1116 1138 1116 1138 0.95

8 15 0.0047 0.28 11.8 2.8 3 21 1149 1167 1148 1168 0.95

9 15 0.00042 0.024 15.1 0.6 1 23 1178 1201 1178 1201 0.93

10 15 0.00076 0.044 14.3 3.1 1 23 1293 1316 1293 1316 0.97

11 15 0.061 3.5 8.3 1.2 2 21 1346 1365 1345 1366 0.94

12 15 0.014 0.83 10.3 1.2 2 20 1536 1554 1535 1556 0.94

13 15 5.1 3e+02 2.3 0.0 2 19 1663 1680 1663 1682 0.87

14 15 0.0077 0.45 11.2 0.6 3 23 1750 1770 1749 1770 0.97

15 15 0.0015 0.088 13.4 4.7 1 23 1842 1864 1842 1864 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0011	0.062	13.9	1.3	2	23	713	736	713	736	0.92
2	15	0.019	1.1	10.0	1.8	3	22	798	817	797	820	0.89
3	15	0.47	27	5.5	1.4	1	23	853	877	853	877	0.97
4	15	0.00011	0.0061	17.0	1.1	1	19	978	996	978	998	0.97
5	15	0.05	2.9	8.6	0.3	2	23	1031	1053	1030	1053	0.94
6	15	2.4e-05	0.0014	19.0	1.0	1	23	1088	1110	1088	1110	0.98
7	15	1.4	80	4.1	5.3	1	23	1116	1138	1116	1138	0.95
8	15	0.0047	0.28	11.8	2.8	3	21	1149	1167	1148	1168	0.95
9	15	0.00042	0.024	15.1	0.6	1	23	1178	1201	1178	1201	0.93
10	15	0.00076	0.044	14.3	3.1	1	23	1293	1316	1293	1316	0.97
11	15	0.061	3.5	8.3	1.2	2	21	1346	1365	1345	1366	0.94
12	15	0.014	0.83	10.3	1.2	2	20	1536	1554	1535	1556	0.94
13	15	5.1	3e+02	2.3	0.0	2	19	1663	1680	1663	1682	0.87
14	15	0.0077	0.45	11.2	0.6	3	23	1750	1770	1749	1770	0.97
15	15	0.0015	0.088	13.4	4.7	1	23	1842	1864	1842	1864	0.98

Sequence Information

Coding Sequence: ATGGATGATATATCGAATGTTGACGGAGCTTGTCGACTCTGTCTAAGAGGGGAAGGGAAGATATCTGTTTTTGAAGAAGATTCCGAAACTAGGACAATAACACCAGAGGATATTTATGATTGTGTCTCAGTTAAGATTGCCACAGATGACAAACTACCAAAAGGGATTTGCGAAACTTGCTTACTCTCAGTTAAAAACTGGTGTTCATTTAAAACTACCTGTGATGAAACTCAGAAGACATTACAGAGTTGGCTCCTCCGGGATAACATAAAAGTACATGAAAAGGAGGATACCCATCTCCCTACACAGAAAGAAGATATTAAAAACAGTTCCTGCAATACCTACAAGATTGAAGATGAAAATAAAAGTGTTGATATAGTGCGTGGTGCATATGCTGAATGTCTTATTAATTTGAACAATGAACAGATTTGTGACGTCCGTCCAGAAGATGAAAGGGGAAGTGATAACATATGCCCCTTGGCTATTAAGTGCAATGATTTGTGTCTTCCTAGTGTAAATGAATGTGACACAACTACTGTTTCCCATTTGGATAAGAAGTTTTCTGATATCTCTGAAGGGACTTGTGAATCAAATGCAGACAAAAATGAAGATTTGTCAAAGCAGTCTGAAACTGTTAATACTTCAGAAAATTCAACTCATGATTTGTATATAGTAGCTTCTTCTAAGTTCAGTGTAAATATAATAGATGAAGCTAAACAGAATGAAAGTGATAACTCCTCAAATAAATTAATTTGTAAATATGTTTTTAATAAAGACAAGGAATCTGTTGAATCATCCATTAATGATGATATGGAAGTTAACAAAGATTATCCTCCTTTTACTAGGGATGAATTAGCCAACAAAGTATCTGTAACCGAACAAGATAATATCCCCTCCTCTAAGAATGGTGATACTTCATCTGCTGACTTTGATGAGTCCAGTTGTTCTGGGTCTACTTCCCAAAAAGTGGATAATCAAGAAAACTTGGACTTGCAAAAATTTGATTCGGGTAGTGAGCAATTCAGCAATGAAAATTCTTTAATAGATAGCACTAATAACAATTTTATAGAGAGTACTGAAAATAGTACATCTTTGGATGCTTTCCCTAGATTCCAAGAAAGAATAGACTCTTTAATCTCTTGTGAAGAAAGTATTCAAAATAGGAGTCTTTCCATTGTCAATGACGGATCTACAAATAAATTACCCAGTGACGGTTTAGTTGATTCTGATAAAGAAAATTACATTCCTAATTTATGTGACAATGACAGTACATTAAAAAAACCTGATAACACCAAAGAGAAACAATCTGTATCTGACATAGAAGGAAGTGAAAATTCTATTGATGGAGAAGGTCTTTCATTTTCTGACATTCGAATCGAATCCACTAGCACATTGACTGAAGATATCAATTTCAATAGTTCTTTCTTAGTAAACACTTGTAGTCCAGACACAGAAGACCAGATTCAAATTCCTCAGGAGAGCAATGGAAGCTGTGATTCTCCTGTAGTGAGTAAAATTAATTGCAACAAATCCTCCTCGGATTTTCAAATTTCTGTCGGTCATAAGTTTGATAGTGAATCTCAAAATACAGATTTGGTTTCGTCTACCCAAATCAGTACCTCTGAAGAATCTTCTAAACATAATGAAGCTTCTTCGAGTGAAGCTAGTTCTTCTGAATTAAGCCTCATATCCGAAGCCTGTGGATCAGTAAACTCCACTAAGCAGACTGAAATTTCTGGTTCGGAAGAAAAGAATGAAGCCCATGATTTCAATCCCGCACTCCCATCAGCTCCTGAGAATGTCCTGGCTAAGGAGAGAAATTCTTCACTTAGCTGCAATGAATCAACGCTACCTCATGAAGCAGTTGGATCATCTGACTCGAGTGTTTCTGCCATACAAGCTCCTACTGACTCAGGATCTCCGCCTTTGTTGGCCATCAGTATAAAGGAAGAACCTGTTGACCCACCGCCTGAAGTTGACGACGAGCCTTCAGAATTGCAATATCCAATTCGAGTAAAATCTGAATTTAACACCTTTGACTTTGAGGACGATTTAAATGATTATGAACCAATTGATGGAGGAAATGACAAGGGTATTTCTGCTACCACTCCTAATACAAATGATAATTCAACTAATGAGTGTCATATTTGTAATCGAAGGTATGCATCTCTCGGTAATTACATGAAACATCTTAATACCAAAGTCCATCTATTTAATGCTGGGTTGACAGAAAATCCTGAAATTTTACCTGCAGAGAATATTTCCCAAGATTCACCAATGCTCCGTTCTAGACTTAGTGGTTCAATAGCTTCTGAATCATTTGATGCCTCGGAAGATGAACGAACAGTAGTCTCGCAATCAACTCCTTCTAAAAGAAAAATCACTGAACATTGTGACTTATGTAACACTTCATTTGGTTATGTTTCAGAATTGAGAAGGCATTTACTTTCTAAAAAACACAGGGATAATGCACGATTAGCCAAGGATATTCACTCCCCTCCAGAAAAAAAGGTTTGCCTTTCCAAGAGTCTTCCGTCAAATGATAGCAGATCAATATTTATTTGCCCTATAGAGAATTGCCATTTTTCTTGTGTGAAGGGCATTAGTTTACTATCTCATATGAAAATTCATGGCATTGAGCAGCCTGTTGAAACCAAAGAAGAGTATTCAGCCTCTAAGCCTAAGTTAAGTGCTAGACAGCAAGATCTATTGAGAAAAGATGCAGAAAAACGGAAATTACTGGTTCAACATCAGCTACAGCAACAACAACAGTTCCAGCTCCAACAGCAACTGCAGCTTCAGCAACAACAACAGCAAGTGTTACAGTATCAACAGCAACAGAAAGAATTACAACTTCAGCTTCAGCTGCAACAGACCTTGGACGATGAGTGCTTTTCTGATGATTATAGACCTCCTGGCCATGTTCGTGATTACGAATGTGAAGGTTGTCACAAAACATTTATAAGGGAAAGTGGGCTTAGGAAACATGGACACTATTGCTCTGCTTTAGAATCTGCTGATATAGGAGTACAAGATAAAGAACAAGAGAAAAACACTGAGGCTAACGATAAAATAAAAACTGAGAAATTGCATTGTCCTCTTTGTGATATAAGCTTTGCTTCCAGAAATGTTTTTGTGAGTCATGTTCAGATTTACCATAAAGGATCCAATCTTGAAAGTGGTCTTCTTAAGCCACACAAAAAACCACCAGTAATGCAAATTAGTAAAAAGTTGAGAGTTACTAATAAGAAAGGTCTAGGATTTATTTGTAACATTTGTGGTAAGAAGTTTAATTTACTTTCTTCCTTAAATTATCATCTTAAATCCCATACTGTTAGTGTTAAGCATATTTGTCGAATTTGTAAGGAAGGCTTTAATTCCCGTAAAACATTTATGGAGCACTGCAGAATGCATTTTCTTAAACCTGGATCTAAAGAAACTTTATGTCATAAATGTTTTAAAGTGTTTAAAACCAGAAGTGAACTATATTATCACAGGAAAAATGATATGTGTTCCATTAAACTTAAAATTTATTCGTGTAATTTATGCGAGCATTCATTTAAAGATCCTTCTGCACTTGAAGAACATAAAGTTGTGTATCATAGTGAATCTCTTGACATGTCTGAAGATGCTGTACCATCCACTTCTATTGGAGAACTGTATGATGACAGTTTTATTTCTTTGAACCCACTCTCTTTAATTCCTTCTACAAATGAAACCCTACCTGGAACCTCCTCCAAGCCATTGACTAGTTATAACAGTAAATCCATGGCTAGTTATAATAGAAATAGTCCTGTAAACATTAATAAAAACAATACAAATTTTAGTAATAAACTAGGTTCTTCAAATTTTACAAAACCAGCTGCTAAATCACCATTCCACTGTGACATATGTGATACAGACTATGCTACAAGACAGACATTGAGGAAACATATAAAGAAATTTCACATTTTAAATGTACCCTATATGGGAAGTAAAAAATATACCAGCTACAAGAAAGTTAATATTCTTCAGGCAAATGCTTTGAAACAGTGGAAATGTAGACACTGTAAAACTGCGTTTGGCTCTAGAAAAATGTTAGTTCTTCATTTAAAAAAATGCCAGTACAATGTTTTAGATTTGGCTAAAGGAATGTGTTATCAGTGTGGCAAGTGGTGTGAATCTGGGAAAACCAGAATCTGCCGATTTTGCTTGCCAGATTTAACTAAATCTAAAACCCAACTTAACAATTTTGTTGAATCTTCACATTTTCAGAAGCCAGATTACCACAACTTTCCAAGTCATAAACCTGTAAAGCAAGAATTTACTGGCACTAAAGAACCAATGGGCGAAGGTTTTCTTGACATTCAAGATTATTCATCATTCCAAAAACAATCTTCAATCTTATCTAATGAAAGTATGTCAGTTACAGTTAAAACTGAACGCAAAGAAGTTTTGAAGAGTACACCAACTGTTGCACGGAATAGTGTTAATTCTCAGAAAAATCAAGAAAGTTTAACTGTGAATAATATACAACTAATGAAGTGTCCCATTGGAAATAAGTATTTCAGGAATGAAATGACTATGATTAAACATTATTCCCAATGTGACGGGAACTGTGAAAATCGTTGCAGTCACTGCAGAAGAATGTTCAATTCTCCTAAAGAATATAAACTTCACTTAATTAATTCAAAGTGTTTTGGGCCAAGGAGAACTCAAGGTAGAATGAAGTATCCCTCTTTTGGTAGCAAAAAAAAGTATTCCAGGAATTCTGCAGCTAAACAAAATATCTCATTTAGGTCAATGGATATTAAACCTACTTTCCTTACACATAGAAGTGATTTGGATGAATGTGAAGACAAATTACCTGATGATTCGTCTGATGTTACACTTGATATGAGCACTGTTGGAAGCACTATTTCCGAGGAAAGTTTCATGGGACTTGAATCATCTGTTTCAACCTCAGCTAATAGACTTCTTGAAGAAAAGTCATTGAAGATCGGAAGAGTTTGCAAATTGTGTGATAAAGTGATTACCATGCAACGAGCAATATACAGGCATGCATATGGCTGCTTCAAAGTTTTTATGTTATCACAAGACAGTGTTTCTTGCCGAAATTGTTTAAAGACATTTAGTAAGCATAATTCAATGAAAGAAAATACTGCAGCTATTAAGCAGCATATTCTTGATTGTCATTTTGTCCCGTATTATGTTGGTGAAGGTCTCTCAGAAGATGGGAGTCGCTTAAATACTCCACCGCCTCTTTTGTGTTATGTTTGTTCATTTGGCTTTACGTCTAATCAAAGTCTTCAGCAGCATATTAAAGACCATAGGAACAGAAAAGATGAAACAAATAATGTAGTTCTTCAATTAGAAGATGAACTGCTCTCCGATGAGAGATTAGCTGATGAAAGAAATATTTTTTCATTATATGTCGAACCAAAGATTTCTAATTCATATCCTGTGAAAACAGGACGTACCTTATCTTTACAAGATTCACCTGACACAAGCATGCCACGGCCACAAGCTTCAGGCAGGAAGTTGTTTCAATGTGATAAATGCTCCAGAAACTTTACAAATAGAAATAAATTTTTAAGGCATAAAAAGGTTCATGGTATTGTTAAACAAAGTGTACTTCATGAAGTAACTGAGAACGTATTAGAGTTTATTAATGAAAATATCCCAGATAAATGTCCTTTAGATACCAATTTACCAGATATCAATCCAACCGATAATTAA
Protein Sequence: MDDISNVDGACRLCLRGEGKISVFEEDSETRTITPEDIYDCVSVKIATDDKLPKGICETCLLSVKNWCSFKTTCDETQKTLQSWLLRDNIKVHEKEDTHLPTQKEDIKNSSCNTYKIEDENKSVDIVRGAYAECLINLNNEQICDVRPEDERGSDNICPLAIKCNDLCLPSVNECDTTTVSHLDKKFSDISEGTCESNADKNEDLSKQSETVNTSENSTHDLYIVASSKFSVNIIDEAKQNESDNSSNKLICKYVFNKDKESVESSINDDMEVNKDYPPFTRDELANKVSVTEQDNIPSSKNGDTSSADFDESSCSGSTSQKVDNQENLDLQKFDSGSEQFSNENSLIDSTNNNFIESTENSTSLDAFPRFQERIDSLISCEESIQNRSLSIVNDGSTNKLPSDGLVDSDKENYIPNLCDNDSTLKKPDNTKEKQSVSDIEGSENSIDGEGLSFSDIRIESTSTLTEDINFNSSFLVNTCSPDTEDQIQIPQESNGSCDSPVVSKINCNKSSSDFQISVGHKFDSESQNTDLVSSTQISTSEESSKHNEASSSEASSSELSLISEACGSVNSTKQTEISGSEEKNEAHDFNPALPSAPENVLAKERNSSLSCNESTLPHEAVGSSDSSVSAIQAPTDSGSPPLLAISIKEEPVDPPPEVDDEPSELQYPIRVKSEFNTFDFEDDLNDYEPIDGGNDKGISATTPNTNDNSTNECHICNRRYASLGNYMKHLNTKVHLFNAGLTENPEILPAENISQDSPMLRSRLSGSIASESFDASEDERTVVSQSTPSKRKITEHCDLCNTSFGYVSELRRHLLSKKHRDNARLAKDIHSPPEKKVCLSKSLPSNDSRSIFICPIENCHFSCVKGISLLSHMKIHGIEQPVETKEEYSASKPKLSARQQDLLRKDAEKRKLLVQHQLQQQQQFQLQQQLQLQQQQQQVLQYQQQQKELQLQLQLQQTLDDECFSDDYRPPGHVRDYECEGCHKTFIRESGLRKHGHYCSALESADIGVQDKEQEKNTEANDKIKTEKLHCPLCDISFASRNVFVSHVQIYHKGSNLESGLLKPHKKPPVMQISKKLRVTNKKGLGFICNICGKKFNLLSSLNYHLKSHTVSVKHICRICKEGFNSRKTFMEHCRMHFLKPGSKETLCHKCFKVFKTRSELYYHRKNDMCSIKLKIYSCNLCEHSFKDPSALEEHKVVYHSESLDMSEDAVPSTSIGELYDDSFISLNPLSLIPSTNETLPGTSSKPLTSYNSKSMASYNRNSPVNINKNNTNFSNKLGSSNFTKPAAKSPFHCDICDTDYATRQTLRKHIKKFHILNVPYMGSKKYTSYKKVNILQANALKQWKCRHCKTAFGSRKMLVLHLKKCQYNVLDLAKGMCYQCGKWCESGKTRICRFCLPDLTKSKTQLNNFVESSHFQKPDYHNFPSHKPVKQEFTGTKEPMGEGFLDIQDYSSFQKQSSILSNESMSVTVKTERKEVLKSTPTVARNSVNSQKNQESLTVNNIQLMKCPIGNKYFRNEMTMIKHYSQCDGNCENRCSHCRRMFNSPKEYKLHLINSKCFGPRRTQGRMKYPSFGSKKKYSRNSAAKQNISFRSMDIKPTFLTHRSDLDECEDKLPDDSSDVTLDMSTVGSTISEESFMGLESSVSTSANRLLEEKSLKIGRVCKLCDKVITMQRAIYRHAYGCFKVFMLSQDSVSCRNCLKTFSKHNSMKENTAAIKQHILDCHFVPYYVGEGLSEDGSRLNTPPPLLCYVCSFGFTSNQSLQQHIKDHRNRKDETNNVVLQLEDELLSDERLADERNIFSLYVEPKISNSYPVKTGRTLSLQDSPDTSMPRPQASGRKLFQCDKCSRNFTNRNKFLRHKKVHGIVKQSVLHEVTENVLEFINENIPDKCPLDTNLPDINPTDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -