Basic Information

Insect: Riptortus pedestris
Gene Symbol: BCL11A
Assembly: GCA_019009955.1
Location: GWHBAZH00000003:122261201-122299730[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.7 1.5e+02 3.2 0.7 1 23 137 160 137 160 0.94

2 6 7.8e-07 4.5e-05 23.7 3.0 1 23 476 498 476 498 0.97

3 6 2.1e-05 0.0012 19.2 5.8 1 23 504 526 504 526 0.99

4 6 1e-06 5.8e-05 23.4 3.2 2 23 836 857 835 857 0.97

5 6 1.3e-05 0.00077 19.9 3.3 1 23 863 885 863 885 0.99

6 6 8.5e-05 0.0049 17.3 0.4 1 22 893 914 893 914 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.7	1.5e+02	3.2	0.7	1	23	137	160	137	160	0.94
2	6	7.8e-07	4.5e-05	23.7	3.0	1	23	476	498	476	498	0.97
3	6	2.1e-05	0.0012	19.2	5.8	1	23	504	526	504	526	0.99
4	6	1e-06	5.8e-05	23.4	3.2	2	23	836	857	835	857	0.97
5	6	1.3e-05	0.00077	19.9	3.3	1	23	863	885	863	885	0.99
6	6	8.5e-05	0.0049	17.3	0.4	1	22	893	914	893	914	0.97

Sequence Information

Coding Sequence: ATGCAGGAGGACACTGACGTACTCACTTGCGGAGCGTGCCAGAAGGCGTTCGCCCTCGGTGACATCGTCAAGTTCATCCAGCACAAGGTGCTAGCCTGCAACAAGGAGAACTACGGCTGCAACGAGACAACAGGGACTACCAACAACGGCGAGTCCGGCGACTCAGACGGCGAGGTGGGGGTGGTGAACCGCCGCCCGTCCATCTCGGCCCCCATGAAGAGGTCCGAAGAGCCGAGGTGCTCCACTCCCAAGCGGCGTGCCGCCCCTGGTTCTGCGTCACCTAATCCCATCATGGCAGAGCTGGACTCGACGCCTCCATCTTCCTCACCCGACGAGGGTCCTTGCAAGAAGCTCAGGACCGACGTTGTAGACGCTCAGTCAAACACCACCAACTCAGAACCAAGTAATTATGTGTGTTCCACGTGTAAGGCAAGACTTCACTCAGCATGGCGACTAGTTCAGCACGTTCAGAACAGCCATGGGATCAAGATTTATGTCGAGAGTTCCTCTTCTGTGTCGATGTCCTCCTTCGGGTCATCGCCTGGAACATCGATCGGCAAGAATCATTCGAGCTCATCGACTTGCAGTTCGAGCTCACCTGGCTGTTCCGGAGCACCGCCCAGCACTCCTCTAGCACTGCCTCCACCTTCGGCTCCAATCGCCTCTCCAAGGCTGACTTCACCTCTCATCGACCCACATCTACCACTTCACAACCCCTTCACAGTCGGTGGACTCCTCAGGATGCCACTAGAACCGGCGAGACACCACCCGTTCACACCGAGCTCAATGGCCAGCGGAGGATCCCTCTTCCCAAGGCCTTCTAGTCAAAGTGAGCACCACTTTCGGATGGAACAGCTGGTATCTGAGCAATTTCGACACCACCCCCTTGGCCTGGCGGCGGCAGTAGCTGCAGCTGTACCTCCTCCACCCTTTGGGCCACCCCCAAACGAGCGGCCACCTCCTACTACCAGGTCTCTTCCTCCTCCTCCCTCTCTTCCCCTTTCACTCGAACCTCAAATAGATTTCTATTCTCAGAGGTTGAGACAGCTAGCGGGGACCACGAGTCCTGGAGCCGCTAACGGCAACTCTTCACCTTCACCTAGGAAGCTGACTCCACCATTCACTAGTCCTAATAACAGCCTTCCATCAGTCAGCTTAGCTCCATCATTGATGTTCAACAATAACAACAACAGCAGCACAAATAATAATAACATTCCTACAAGCACTGCGAGGTCACCAACTCCGAGGCCACAACAGCCGACTCCACCAGCCGATCAGAAGCCGGCTCCAGTGAGGGACTCCCCACCACAGGAAACTGTTGATCTCACGTCCACACCAAGGTCTGCTTCGACACCCCCAAATAAGGCGGATTATTCTGATAACCCAACCTCAGAAAATATGGACGTTTCTGACGCCAATAGAATACATCCTTGTGAGTACTGTGGAAAGAAGTTCAGATTCCAGAGTAACTTATTAGTACATAGGAGATCTCATACTGGCGAAAAACCTTATAAATGCTCCGTGTGCAATCATGCCTGTTCTCAGAGCTCAAAGCTCAAAAGGCATATGAAAGTACACAAGAGGAGTCGAAGTAAGACCTCTGGAGGAGACGATGGTAATCCGAATGGAAGTGTAAATTCTACTCCTGATCAAATGTCAAATGCCGGTTCTGTTGAAACCCTTGACGATGAAGATGACGATGATGATGATATGGATGAGGAAGATGATGAAGAAGAGGATGAGGAAGATGAGGAGGAAATGGAAATGGAAGAAGAAGAAGGTGACGAGGATGACGATCTTGGAGGAGACGCCCCTGAAGATCTCACTACTAAGTCCACATCCTCAACTCCTCCTAATACTGGAGACCCGAAAGGAGGTTCTGGCTCACCAGCTCCTGACAAGACCTCATCTGGCTCCCTTGTTGGAGAATTGATGGACAAGTTTGGATTGAGCAATATACAACAATACAGTGAAGCGTACAAAGCTGCTCTACAAGAATCAGTTGGAGCACATCCCTTAATATCGAGAAAAGATGACCTTCTTCATCGATCACATCTTCTTGCTGACAATAATAATAGTGGCAGCAAACCCTCTCCCACAGGCCGATTAGAAAACGGGCTTTTGGAAAAATCTGCAGCTCTTAGATTCAGAGAAGAGTTTGCAAAAAACATAATAACAGGGCAGCCACAGTTAGACCTCGTAGGAGGTCCCCATGGACTATTTGGACACAGCTTTGAGAACCCTTTCGACGCCAGTAAACGAGCTAAGCTTGAAGGCAGAGAACTTGGAAGACCTGGTGATAGAGACATGTATGCCGGGCTCTGGTTTCCAGGGCTCTCTGCCCACCATAGAGATCAGATGTTTGGAGCGAACGGCGGAGACTCAAATATTCTCAAAGATAAGAAAGGTCCAGGGACTTCACTGGCGGCAGCTGCCGCCGCTGCGGCTGCCCTCAATCTAGGTTTACCCTCGCAAAACATGAAGAAAGACAGCAAGAGGAACGACACCTGCGAGTTCTGCGGAAAGGTTTTCAAGAACTGCAGCAACCTGACTGTCCACAGACGATCTCATACCGGCGAGAAGCCGTACAAATGCGAGCTGTGCTCATACGCCTGTGCACAAAGCTCCAAGCTGACCCGACACATGAAGACACACGGAAGGATGGGCAAAGACGTCTATAGGTGTAGGTTCTGTGAGATGCCCTTTTCGGTCCCTTCAACACTTGAGAAGCACATGAGGAAGTGCGTCGTCAACCAGAATATCAAAGTGGAGCACATGCTGCCTTCCATCATGTCTGGAGACGAGGACTCGGCAGCCTCCACGCCCAAAGACACAGCCTCCACATGA
Protein Sequence: MQEDTDVLTCGACQKAFALGDIVKFIQHKVLACNKENYGCNETTGTTNNGESGDSDGEVGVVNRRPSISAPMKRSEEPRCSTPKRRAAPGSASPNPIMAELDSTPPSSSPDEGPCKKLRTDVVDAQSNTTNSEPSNYVCSTCKARLHSAWRLVQHVQNSHGIKIYVESSSSVSMSSFGSSPGTSIGKNHSSSSTCSSSSPGCSGAPPSTPLALPPPSAPIASPRLTSPLIDPHLPLHNPFTVGGLLRMPLEPARHHPFTPSSMASGGSLFPRPSSQSEHHFRMEQLVSEQFRHHPLGLAAAVAAAVPPPPFGPPPNERPPPTTRSLPPPPSLPLSLEPQIDFYSQRLRQLAGTTSPGAANGNSSPSPRKLTPPFTSPNNSLPSVSLAPSLMFNNNNNSSTNNNNIPTSTARSPTPRPQQPTPPADQKPAPVRDSPPQETVDLTSTPRSASTPPNKADYSDNPTSENMDVSDANRIHPCEYCGKKFRFQSNLLVHRRSHTGEKPYKCSVCNHACSQSSKLKRHMKVHKRSRSKTSGGDDGNPNGSVNSTPDQMSNAGSVETLDDEDDDDDDMDEEDDEEEDEEDEEEMEMEEEEGDEDDDLGGDAPEDLTTKSTSSTPPNTGDPKGGSGSPAPDKTSSGSLVGELMDKFGLSNIQQYSEAYKAALQESVGAHPLISRKDDLLHRSHLLADNNNSGSKPSPTGRLENGLLEKSAALRFREEFAKNIITGQPQLDLVGGPHGLFGHSFENPFDASKRAKLEGRELGRPGDRDMYAGLWFPGLSAHHRDQMFGANGGDSNILKDKKGPGTSLAAAAAAAAALNLGLPSQNMKKDSKRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRMGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNIKVEHMLPSIMSGDEDSAASTPKDTAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00757602; iTF_00764163; iTF_00715337;
90% Identity: iTF_00757602;
80% Identity: -