Basic Information

Insect: Riptortus pedestris
Gene Symbol: ZNF236
Assembly: GCA_019009955.1
Location: GWHBAZH00000002:89545002-89591136[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.16 9.2 7.0 1.5 3 20 237 254 235 257 0.92

2 24 5.8e-05 0.0034 17.8 2.0 1 23 263 285 263 285 0.99

3 24 0.0016 0.096 13.3 0.1 3 23 292 312 291 312 0.97

4 24 0.0003 0.017 15.6 0.7 3 23 320 340 319 340 0.96

5 24 0.19 11 6.8 0.7 1 23 357 380 357 380 0.94

6 24 4.6e-05 0.0027 18.2 4.5 2 23 399 420 399 420 0.97

7 24 5.1e-06 0.0003 21.2 0.7 1 23 426 448 426 448 0.98

8 24 5.2e-06 0.0003 21.1 0.5 1 23 454 477 454 477 0.98

9 24 0.032 1.9 9.2 4.6 1 23 487 510 487 510 0.95

10 24 4.9e-06 0.00028 21.2 0.4 3 23 587 607 586 607 0.99

11 24 0.0024 0.14 12.8 5.8 1 23 613 635 613 635 0.99

12 24 0.0027 0.16 12.6 6.8 1 23 641 663 641 663 0.97

13 24 5.4e-05 0.0031 17.9 4.1 1 23 737 759 737 759 0.99

14 24 0.053 3.1 8.5 4.2 1 23 764 786 764 786 0.97

15 24 0.011 0.62 10.7 0.5 2 23 792 814 791 814 0.96

16 24 0.052 3 8.6 0.8 2 23 821 843 820 843 0.92

17 24 0.014 0.81 10.4 0.1 2 23 988 1009 988 1009 0.96

18 24 2.2 1.3e+02 3.4 0.2 5 23 1019 1037 1015 1037 0.90

19 24 9.3 5.4e+02 1.5 0.3 2 23 1045 1067 1044 1067 0.91

20 24 1.7e-06 0.0001 22.6 6.2 1 23 1139 1161 1139 1161 0.98

21 24 0.0003 0.018 15.6 2.7 1 23 1167 1189 1167 1189 0.99

22 24 5.4e-05 0.0031 17.9 1.9 1 23 1195 1217 1195 1217 0.98

23 24 0.0018 0.1 13.2 1.6 1 23 1223 1245 1223 1245 0.97

24 24 0.0081 0.47 11.1 0.2 1 21 1416 1436 1416 1437 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.16	9.2	7.0	1.5	3	20	237	254	235	257	0.92
2	24	5.8e-05	0.0034	17.8	2.0	1	23	263	285	263	285	0.99
3	24	0.0016	0.096	13.3	0.1	3	23	292	312	291	312	0.97
4	24	0.0003	0.017	15.6	0.7	3	23	320	340	319	340	0.96
5	24	0.19	11	6.8	0.7	1	23	357	380	357	380	0.94
6	24	4.6e-05	0.0027	18.2	4.5	2	23	399	420	399	420	0.97
7	24	5.1e-06	0.0003	21.2	0.7	1	23	426	448	426	448	0.98
8	24	5.2e-06	0.0003	21.1	0.5	1	23	454	477	454	477	0.98
9	24	0.032	1.9	9.2	4.6	1	23	487	510	487	510	0.95
10	24	4.9e-06	0.00028	21.2	0.4	3	23	587	607	586	607	0.99
11	24	0.0024	0.14	12.8	5.8	1	23	613	635	613	635	0.99
12	24	0.0027	0.16	12.6	6.8	1	23	641	663	641	663	0.97
13	24	5.4e-05	0.0031	17.9	4.1	1	23	737	759	737	759	0.99
14	24	0.053	3.1	8.5	4.2	1	23	764	786	764	786	0.97
15	24	0.011	0.62	10.7	0.5	2	23	792	814	791	814	0.96
16	24	0.052	3	8.6	0.8	2	23	821	843	820	843	0.92
17	24	0.014	0.81	10.4	0.1	2	23	988	1009	988	1009	0.96
18	24	2.2	1.3e+02	3.4	0.2	5	23	1019	1037	1015	1037	0.90
19	24	9.3	5.4e+02	1.5	0.3	2	23	1045	1067	1044	1067	0.91
20	24	1.7e-06	0.0001	22.6	6.2	1	23	1139	1161	1139	1161	0.98
21	24	0.0003	0.018	15.6	2.7	1	23	1167	1189	1167	1189	0.99
22	24	5.4e-05	0.0031	17.9	1.9	1	23	1195	1217	1195	1217	0.98
23	24	0.0018	0.1	13.2	1.6	1	23	1223	1245	1223	1245	0.97
24	24	0.0081	0.47	11.1	0.2	1	21	1416	1436	1416	1437	0.94

Sequence Information

Coding Sequence: ATGACATTGGTAGAGAACCGTATGTTGGGCTTTACTGCTCTGCCAAAACAGATGATGTACACAAGCTGCGGTGGACTGCTGAGTGGTTCGAGACGAAGAGTAGGAGAGGATGGATTCCTGGTGTTGGTGTCTTCTCCGGTGCGGGTAAGGAGCTGGAAGACAATTACTCAAAGCTTTGTAGACAAGTTACTTCTTCCGATGGATGTAGTTGACTTGGAAGAAATGGGTCTCATTGATGGTTCAACAGAATATATAGCGAGCATTGCCCATTCTCCTCAAATTGTTTACTCTCAAAATGGTTCAATAAATATTAATTCTGAAGACCTTACGACTTATGGGAATAGTGTTACCTATGTTACTATTCCTAATATCGTTCATATAGTTCAAGATGGAACTAATCAGAATGTTGGATATTTAATAAATGATAACCAGATACCTATAGTAAACAGATCTATTGTTGCCAACCAAGAAAATTTTGTTGAGCTGAATGAAACCATTGACAATGTGGGCTCAGTAGAAGGAGTACAGAAGGATATTTCACAGTTCTTGAAGTCTCCCGGGATAACAACTTCGGGAGAAAATGAGGAAGCAGAATGTAAAAATTTGAGCAAAGACTCCAGTCCTTTTTGTGGTGAAATCACTGAAGAAAGAACTTCTTCAAATTTTGATCATAACGATGAGTCATCAGAAATGCAGGGCTCTCTATTTTGTGAGACATGTAACTTGCAGTTTGCTTCTTGGAAGCTTTACAAGAAACATAAGTGGAAGCATATGAATGACAAACCCTTCAAATGTAGTGAGTGTCATGAAACATTCAATTATGAGCTGAATTTAAATTTACATATGGCTACTCATAATATTGAGAATCCTTTCTGCCCGGTTTGCAAAAGAAAGTTTGGAAGAATTGCTGGTCTGAAAGCACACATTATGCTCCATGAACAAGAGGAAAGTGTATTTTGTAGTGAATGTGGCGAAGAGTTTAACAGCCATATATATCTTCAGAGGCACATGGCAGAACATCAATCCGGTGGCATTCAAAGACACAGACCAGCACCTGTTAAGAAGTCATTTCCATGTGGTCATTGTGACCAAAAGTTTGAGTTGGTTGCTGATCGCAAAGAACATCTCATGAAAAGTCATAAGGTTTTAGAAAATAGAAGACTAAAAAAATTCAAAAGAAGAAGACGAAATAATGAATGTGATGAATGCCATAAGTGTTTTGAAAAACCTAGTCAACTTCTTCGTCATAAGCGAATACATACTGGAGAACGTCCATATGAGTGTCAACTATGTACTCGCGCCTTTAGCCAAAAAGGTACTCTTCAGATTCACATGCTAAAACATACAAGAGAAAGACCTTATGTTTGTGAATATTGCAGAGGAACATTTAGTCAAAAAGGAAATCTTCAAGCCCATATTAAAAGACTGCATATTGCCTCAGATGGGGATGAAAGGCACTATAAGTGCCATTTATGCTCTTGTATATTTAGGAAACTTGGAAGCTTGAATGCTCATTTCACAAAAGCTCATTCTGTTTTTAATTCCGCGACCTTTGAAAAACCCTTTGAAGATAATAAATGTCAATCTGATAGTTCCAATACTTTAAGAGCTGACTCATCTTCAGATTCATCTAATAAAGAAAATGAAAATGCTAAAAGTGATGAAAATAAATCTGGGCTTGTTACAATAACTGACAATCTGAAAGATGGAGCAATACAACAGCATTTAGCCTACCAAAGGAAATTAAAAAGCTTATTATGTAGCTACTGTTCAAAGGAGTTTAGGCGACCAGGAGATCTTGTCAGACACGTTAGAACTCATACTCATGAAAAACCTTTCAAGTGTAAACATTGTTGTAAAAGTTTTGCTTTGCAATCTACACTTACTGCACATGTTCAAACTCATGTTGGAGGGAGGAAATTTTTTTGTCCTACTTGTAATAAGTGCTATTCTACAACTCGCAGTTTAAAACTTCACAAAAAAAAACACCTTTGTGATTTGAAATCTACACCGAAAGATACTGAAATTGGAGAAATAGTTATAGATGAACTTGACTTTACACAGGGAGGAATGCAACCCACTGTTGTTAGTTTTGATCAGGTTGACATAACTTCTCTGAATGGAAACATCATTGTAACTGAAAATGGTAACATTGTTGATATGTCCAGTGATGTTGATGAAGATGAAGCTAGGAGTGTTCAAAATACATACAAATGTTTGGAATGTAATGTTTCATTTAAAACTCAATTTCATCTCAGTACTCATTTGCAGACTCACAAACAGTCTTCCTATAACTGTGAATTCTGTCAATGCACATTTACTTCAAAAAATATCTTGAAAGCTCATTTAAAGCAACATCTATCAGTGAAACAAAAGTGCGACATCTGTGAAAAAGAATTTCAATCTGACATTAGTCTTAAACAACATAAGGAAACAGTTCACACCAATAGTTTCATTTGGGTCTGTCCCATGTGTGGTTCAACTTTCAAATCATATGTATCATGCAGAAATCATATGGCAGAGACGCATCCCAAATTAAATAAGATGAAACCTATGAAATTATCAGAAGAGCTGGAGCAAGTAAATAATACTCATTCAACTGAAGGTCCTTCACTATCTGGTGTAATTTCTTGTGAAAATATGACCTCTCCTTCAGAGTTAAGAGACATTCTTCCCTCATTGCAACCAAACCATGTTTACTTTATAGCTAATGATGATGCAGAACTTACTCTCTCAACAATTTCTTCAAAACCTTCTCTCCAGGATCCTCAACTTGAAGGACTTCCTCTTTATGAGGAAAGAACGATTGTCACCAACACTATATCAAATACTTCTGATAAACAGCTTTTTGAAAATTCTTTGGATAACTGCATTTTTACTCTCCAGCCTAGCATTGATATGAATACCCCTATCATTAATGCAGAAATCAGTGACATTCTTCCACAAGCTCAAGCTCTTAACAGGTGTGAGGAATGTAATTTGGTGTTTACAAGTGTGGCTGATTTTGCTGTACATAAAACTGTTCATAATCAGGAAAAAACACTTAATTGTATTAACTGTGATGAAAATTTTACGTCCACTGTTGAATATGAGGAACACAGTAAAGCTCATTACTTTGTTGAGAGATTAATTCAGTGTTCATCATGTCAAATGGAGTTCCTGAGTGAAGAGGAATTCCAAGCACATAGTGAAAAATACCATTTAAATTCAAAGGTTCCAACAGAAAAGAAAAAGTCACGTTCTAATTGGAGACCACCTGCTAGAAGATTGACTGAGGAAGAAGCTAAAGTTCTGTCTGCTATTGAACCTGACAATGCCAATATTTCAGAAAAAATCCTTCTCCAATCTCTTTTGGAAAAAGAGAGATACGAACATCCTGTAAAAGAAGAAGTTAAACCTCAAGAAGTACATAGACACAAGTGTAAATATTGCACAAAGAGCTTTAGAAAGTCTTATGATTTAATAAGGCATTTAAGGACTCATACGGGGGAAAGACCTTACCAGTGTACTTCTTGTAATAAAAGATTTTCTATCAAATCGACTGCATCAAACCATATGAAGACCCATACAAAAGATCGCTCATTTGAATGTTATGTGTGTTCAAAACATTTTGCAACTACTGGCAGCCTCAAGATCCACATGAGGCTTCATACTGGATTCAAACCGTATGCTTGTACATTGTGTGATGCTAAGTTTAGAACATCAGGACATAAAAAGGCACATTTGATTAAACATATGAAACAAGCTACCAGCAATGAAGAATCAAAAAGGAAAAATTGTGATGAGAGTGTAAATGAGTTTTGCCTGGAGTCTGAAGATAAAACAAAAGAAAAAGAACAGAATCCTGCTTCTGTGATCGAAGGGCCGCCATATTTATTGTCCCAAAACTCTTTTGATAGACTAGTTGGTGACAGTAATGAAGAGTATTCATCTACATTGAAAATATCAGAAAGTGGAGAACCCAAAGATATTCATAACAAAGCTCAAAAATACTTTTTAAATATAAATGACCAAGGTGTCTCTAATGGAGAGGCACCTAAATACTTCCTTTCTATTAAAGATGGGACGAGTCCTGATGATACTTTCATTCTTGAAGATCAGATAATAGTAACTATTACTAATGTAGACTCTGCAACTTCACAGAGAACAAACCAAGGAGATAGTTGTAGAAATGTTTGTTTGGGAAAATTTGATAAAAAGCAGGACCTAGATCTTCATAATCTGACACATGATTTACAACATAACTTCTCTTGTCCTGAGTGTGCAGAATCATTTTCCCTGGAGGAAGAACTGAAGGCACACAAATGTGTTAAAAGTACCTCTCTTGATCTTTTAGATCATGATTTGTTCCTTTTTCCTAATGTGTAA
Protein Sequence: MTLVENRMLGFTALPKQMMYTSCGGLLSGSRRRVGEDGFLVLVSSPVRVRSWKTITQSFVDKLLLPMDVVDLEEMGLIDGSTEYIASIAHSPQIVYSQNGSININSEDLTTYGNSVTYVTIPNIVHIVQDGTNQNVGYLINDNQIPIVNRSIVANQENFVELNETIDNVGSVEGVQKDISQFLKSPGITTSGENEEAECKNLSKDSSPFCGEITEERTSSNFDHNDESSEMQGSLFCETCNLQFASWKLYKKHKWKHMNDKPFKCSECHETFNYELNLNLHMATHNIENPFCPVCKRKFGRIAGLKAHIMLHEQEESVFCSECGEEFNSHIYLQRHMAEHQSGGIQRHRPAPVKKSFPCGHCDQKFELVADRKEHLMKSHKVLENRRLKKFKRRRRNNECDECHKCFEKPSQLLRHKRIHTGERPYECQLCTRAFSQKGTLQIHMLKHTRERPYVCEYCRGTFSQKGNLQAHIKRLHIASDGDERHYKCHLCSCIFRKLGSLNAHFTKAHSVFNSATFEKPFEDNKCQSDSSNTLRADSSSDSSNKENENAKSDENKSGLVTITDNLKDGAIQQHLAYQRKLKSLLCSYCSKEFRRPGDLVRHVRTHTHEKPFKCKHCCKSFALQSTLTAHVQTHVGGRKFFCPTCNKCYSTTRSLKLHKKKHLCDLKSTPKDTEIGEIVIDELDFTQGGMQPTVVSFDQVDITSLNGNIIVTENGNIVDMSSDVDEDEARSVQNTYKCLECNVSFKTQFHLSTHLQTHKQSSYNCEFCQCTFTSKNILKAHLKQHLSVKQKCDICEKEFQSDISLKQHKETVHTNSFIWVCPMCGSTFKSYVSCRNHMAETHPKLNKMKPMKLSEELEQVNNTHSTEGPSLSGVISCENMTSPSELRDILPSLQPNHVYFIANDDAELTLSTISSKPSLQDPQLEGLPLYEERTIVTNTISNTSDKQLFENSLDNCIFTLQPSIDMNTPIINAEISDILPQAQALNRCEECNLVFTSVADFAVHKTVHNQEKTLNCINCDENFTSTVEYEEHSKAHYFVERLIQCSSCQMEFLSEEEFQAHSEKYHLNSKVPTEKKKSRSNWRPPARRLTEEEAKVLSAIEPDNANISEKILLQSLLEKERYEHPVKEEVKPQEVHRHKCKYCTKSFRKSYDLIRHLRTHTGERPYQCTSCNKRFSIKSTASNHMKTHTKDRSFECYVCSKHFATTGSLKIHMRLHTGFKPYACTLCDAKFRTSGHKKAHLIKHMKQATSNEESKRKNCDESVNEFCLESEDKTKEKEQNPASVIEGPPYLLSQNSFDRLVGDSNEEYSSTLKISESGEPKDIHNKAQKYFLNINDQGVSNGEAPKYFLSIKDGTSPDDTFILEDQIIVTITNVDSATSQRTNQGDSCRNVCLGKFDKKQDLDLHNLTHDLQHNFSCPECAESFSLEEELKAHKCVKSTSLDLLDHDLFLFPNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -