Rped008743.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- Dnajc1
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000004:27216529-27235154[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3 6.6e+03 -2.6 0.0 8 21 23 36 21 41 0.82 2 3 0.00069 0.73 10.1 0.0 4 40 295 334 292 340 0.83 3 3 8.5e-11 9e-08 32.2 0.0 3 45 377 424 375 425 0.88
Sequence Information
- Coding Sequence
- ATGCCAAAGCTCTTGCAGATAATCATAGTTTGTGTGTTTTTTGGAATTGTAAGTGCATGGGATTCAGATGACTTAGAAATATTTGATTTAGTTGAAGAAGTTGGACAAAGTTTCTATGAACTTCTAGAAGTACCTGAGAATGCCGATGGTCCTGCTATAAAAAAGGCTTTTAGGAAGCTCTCGTTAGCTCTCCATCCTGATAAAAATGATGCTCTTGATGCGAATATCAAGTTTCGTCAACTTGTTGCAGTTTATGATGTACTTCGTGACAATACAAAAAGAGCAAAATATGATGATGTTCTTATTAATGGGCTTCCTGATTGGAAGGAAGCAGTCTATTATTATCGAAAAGTTCGAAAAGTGGGCCTTATTGAAATGTCCGTCATACTTTTTATCATTATTACTATTGGACAATACCTAGTTGCTTGGGCGGCATACTTTGAGAAAAAGTATGCAATTGAAGAGTTTGTTAATTTGAAAAGCAAAAAGTTACAGAAAAAACAAAAAAAAGGAAAGGCTGTAGACATGGAAACTGTTCAGATACTTCCTGAACTAGTTGGAGCTATCCCAAAACCTACTGTGGCATGTACACTTCCTGTTCAGCTCTTCAGATTATGTTGGTTTTTGGTTATTGACAGTCCTCCTATGACATATCAATGGTTTAAAAGACTTATTACTGAAAAGTTGAAGAAAAAGGAACAAGTAGAAGAAGAGGAATCATCTGAAGAAGAAGTAGTTGTTCCAGTTCGCGAAAGAGGACCAAGGAGAAGAAAAGGTTTTCAACTTCCTGAAATGAAAGATTCTGATAAAAAACCACAAGACATAAATAAAAATGTTACTATAAAGCCAAAGGATGAACCAAAAATTATATATGGAGGCATCTGGACTGACGATGATTTTGCAGATCTTATTAGGTTAATGAAGAAGTTCCCTCAAGGAACACAAGAAAGGTGGGAAAAAATAGGAGAGGCCATGCATAGACCAGTTAATGAAGTAGCTCATATGGCACATAAATTGAAAGATGAAGCCTTCAAACCAATTCCAAAACAGGAGGAAGAGAAGAAAGAGGAAGAACCAAAGAAAGTGAAAACTAAAGGTGGTAAAACAGGAGATGATGTTGATGATAGTGCCTGGAATCAAGTACAGCAAAAAGCTTTTGAGCAAGCCTTAGCTGCTTACCCTAAAGGCTCTGCCGGAGATCGTTGGGAGAAGATAGCCAAACTAGTCCCTGGGAAAACCAAGGAGGAGTGCATGTTGAGGTATAAGAGCCTCGTCGATTTAATAAAAAAGAAGAAAGAAAAATGTGATAACTCAGAAAAAATTACCGAATCCTCTTCTTAA
- Protein Sequence
- MPKLLQIIIVCVFFGIVSAWDSDDLEIFDLVEEVGQSFYELLEVPENADGPAIKKAFRKLSLALHPDKNDALDANIKFRQLVAVYDVLRDNTKRAKYDDVLINGLPDWKEAVYYYRKVRKVGLIEMSVILFIIITIGQYLVAWAAYFEKKYAIEEFVNLKSKKLQKKQKKGKAVDMETVQILPELVGAIPKPTVACTLPVQLFRLCWFLVIDSPPMTYQWFKRLITEKLKKKEQVEEEESSEEEVVVPVRERGPRRRKGFQLPEMKDSDKKPQDINKNVTIKPKDEPKIIYGGIWTDDDFADLIRLMKKFPQGTQERWEKIGEAMHRPVNEVAHMAHKLKDEAFKPIPKQEEEKKEEEPKKVKTKGGKTGDDVDDSAWNQVQQKAFEQALAAYPKGSAGDRWEKIAKLVPGKTKEECMLRYKSLVDLIKKKKEKCDNSEKITESSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00757271;
- 90% Identity
- -
- 80% Identity
- -