Rped005620.1
Basic Information
- Insect
- Riptortus pedestris
- Gene Symbol
- RCOR3
- Assembly
- GCA_019009955.1
- Location
- GWHBAZH00000003:52665119-52708742[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-09 3.3e-06 27.2 0.0 3 46 127 170 125 170 0.96 2 3 4.4 4.7e+03 -2.1 0.4 36 44 271 279 271 280 0.87 3 3 1.4e-12 1.4e-09 37.9 0.0 3 45 383 425 382 426 0.96
Sequence Information
- Coding Sequence
- ATGGTTCTTGCTGATAGATCTTCAGATAATTTACGAAACGGACGAAGATCGAGAGGACCGAGCCCTAGTGAACAATCTTCTGACCTGAGCACTGATGAAGAATCAGGAGAGAAGATTCGTGTTGGTCGAGAATACCAAGCCATTATTCCTCCACTCATACCAGTTTCCGAAAGAAAATTAGATCAATGTCCAGACCGTGCACTACTTGTGTGGTCACCTACCAATAATATTGCTGACCATAATTTGGATATGTATATAAATATAGCAAAAGAAAAATATGGTTATAATGGAGAACAAGCACTCGGAATGCTATTTTGGCATAAGCATATTCTACAGAACGCAATTAATGACCTCCCTAATTTCACACCTTTTCCTGATGAGTGGACTGTAGAGGACAAAGTACTTTTTGAACAAGCTTTCCAATTCCATGGGAAAAGTTTTCATAGAATTAGACAAATGCTCCCAGATAAATCAATAGCTACTTTAGTAAAACATTATTATTCTTGGAAAAAAACACGATGTCGTACAAGTTTGATGGACAAACATGCTCGTAAACTTGCCAGATCTGGAAATAGCAATGAGGAAGGTGGTACAGCTTCGGACGCTGGTTCAGAAGTTGGCTCTAATACTGATTCGGATTCAGAGGATAAGAAATGGATCCAATTGGGTGGGAACAGCCTTTCTCCAAGTACACCTCAATCGAATACGGAAAATATACAAGATAAAGACGGAAGTGAATCCAAAACAACTTGCAGCAATTGTGGTGTTGTATGTACTATAGCTCAAACAACTTCAAAAGGGCCCTTATGTAATTCCTGTTATACTCATTGGAGGCGGACTGGTTGTATAAGACCCACAGTTGGACCGGCAAAACCTAGAGATCGCCATGCTAATAGTGTATTAGCTCGAAGTAAACGTAAACCTCCTCGAGGGATGTACATAAATCATGATGACCTCGTGACCCTATCTTCCTCGGAACAACCACAGCAAGGTGGAGATGCTATTCTCAAAAGCATGGACCGAGACATAGTTGCTCTCAAACGACAAGTACAAAGTAATAAGCAAGTTTTGTCATCACTAATTGCAACTACTGCAGAAGGCTTAGGTGAATTCAGGCCTTCTGACAATAACACTCGAATTAATGCCAGATGGACAAATGAAGAAATGCTTCTTGCAGTACAAGGCATCCGAATGCATGGGAAAGATTTTGCAACCATTGCTGAAATTATTGGTACAAAAACAGAAGCTCATGTAAGATCATTTTTTGCTAATCAAAGAAAGAGGTATAACTTGGATAAAGTCTTATCTGAATTCGAAGCTGAGCATGGCCCTGTCATTGAATCTGATTCTAAGATGGATGTCGATGGCGATAATACAGCTGCTGGTTCAAGTGCACCTGCTTCTCCTTTAACACCAAAAAATTCTAGTAACAGTAACAAAACCTCATCAAAATGA
- Protein Sequence
- MVLADRSSDNLRNGRRSRGPSPSEQSSDLSTDEESGEKIRVGREYQAIIPPLIPVSERKLDQCPDRALLVWSPTNNIADHNLDMYINIAKEKYGYNGEQALGMLFWHKHILQNAINDLPNFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIATLVKHYYSWKKTRCRTSLMDKHARKLARSGNSNEEGGTASDAGSEVGSNTDSDSEDKKWIQLGGNSLSPSTPQSNTENIQDKDGSESKTTCSNCGVVCTIAQTTSKGPLCNSCYTHWRRTGCIRPTVGPAKPRDRHANSVLARSKRKPPRGMYINHDDLVTLSSSEQPQQGGDAILKSMDRDIVALKRQVQSNKQVLSSLIATTAEGLGEFRPSDNNTRINARWTNEEMLLAVQGIRMHGKDFATIAEIIGTKTEAHVRSFFANQRKRYNLDKVLSEFEAEHGPVIESDSKMDVDGDNTAAGSSAPASPLTPKNSSNSNKTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00757268; iTF_01095748; iTF_00763796; iTF_01298304;
- 90% Identity
- -
- 80% Identity
- -