Basic Information

Insect: Riptortus pedestris
Gene Symbol: clz9
Assembly: GCA_019009955.1
Location: GWHBAZH00000004:22728580-22730466[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-10 1.1e-07 31.5 0.0 1 39 15 52 15 54 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-10	1.1e-07	31.5	0.0	1	39	15	52	15	54	0.94

Sequence Information

Coding Sequence: ATGCCAAGGAGTTACAAACGATTAAAACCGAACAAAGTACAAGATCCAGAGGTTATTAAGGCAGCTGTTGAAGACATAACTAATGGCCTTAGCCTTCGAAACGCAGCGGTAAAATATGACATCTATTATAGTGTCCTCTACAGACATTTGAAAAAAGGTGATCTAATTAAGAAAAAAGGAGGGCAAACCGCTTTAACAGAAGAAGAGGAAAAAACTTTGGCGAGTAGACTTATTATTTGTGCTGACTGGGGCTACCCAATTGATTCGTGGACTCTGCGAATTTCGGTCAAAGAATCGCTTGACCGCCAAGGTAGAACCATAAAAAAATTCAAAGACAACTTTCCTGGCCGTGATTTTGTCTATTCTTTTTTGAATAGACATAAGGCTGACTTGTCACAAAGGTTATGCCAAAACATTAAACGGGTCAGAGCAGGTGTCTCCCCAGAAACGGTCAATGAGTACTTTGACAGACTAGAAGCAGAGCTCAGAGACGTTCCTTCATCAAACATTATTAATTATGATGAAACGAACCTTTCTGATGATCCTGGAAAACATAAAGTAATAACTAAGTGTGGATGTAAGTACCCAGAAAGGGTGATGAACTCAACCAAATGCTCCATTTCTGTCATGTTTTCAGCTGCTGGTGATGGTCACCTCTTACCCCCATATGTAGTCTATAAATCTTTACACTTGTATGAAAGTTGGAGAGAAGGAGGCCCTGATGGGTCCAGATACAATAGGACCAAAAGTGGTTGGTTCGACAACTTTTGTTTTTCTGATTATGTTGAAACCATAGCCCTTCCTTATCTTAGACGTTTACCTGGCAAAAAGTACATGATTGGAGACAACTTATCTAGCCACTTGTCTTTGGATCTCATTAAAAAATGTGCAGAAAATGATGTCCTCTTTATATTTTTACCAGCACACTCCACGCACCTCACTCAACCATTAGACGTGGCATTCTTTCGGCATCTCAAACTGGCATGGCGTTCAATCCTTCTAGATTGGAAAAAAGGACCCGGCAAGAATGAAGCTACAATTCAAAAGAGCAAGTTTCCTAGTTTGCTAAAGAAACTGTGTGAATCATGCAAATCGGAAAATGTAATTTCTGGCTTTAGAAAATGTGGTATTGTGCCCCTAAATCGGAAGGAAGTACTAAAGATGCTACCCTCCTCAGATTTGTCTATTGAATCAACCCAATCCTCAAGAGCCACAACACCAGCACTATCTCCTGTTGCTGCTATTGATGCTTCCTTCAAGGAACTATTAACAGCTCTAAGACACACAGAAACAGTTCCAGCTCGAAAAAAGCGAGTGAAAGTAGATGTTGGTCCAGGAAAAAGTGTTTCTGTGGCAGAAATACCAACAGAACCAGATCAGGCTGGACCTAGCACATCTGTTGCTGGTACAAGCACTGACAATGATAATTCCACAGGTACCAGAAAACAAAGTGTAAGTGCCAGGAAAAAGAAAAATAAAAAACTCGATTCAGAATCATCACCAGAAGATTCGGACTATTCTGTGCAAGACAGTGACTCAGATCTCACATTATCCAATTCTTCTGCAAATGCCGAACTTTCAAAAGAACTTGACAGATTAATCCAACCTGACGATTTTGTAATCGTGAAGGTATATGGAAAAACTAAAAATGTATTTAGAATGTATGTCTCCAAAGTCACTGACTTTCAAGATGACGGTTATGTTGGACTGTTTTGCAAGAAAACCCTCAGCAGTAATATGTTTTCCTTGACTGATGAAGAATCATTTTTCTCCAAGGATGATGTAATTAAAAAATTGATGCCAGTTGTTCAAACCTCAAAGTCTGCTTCTCGCTGGAAAGACAAAATCTGTTTTCAGGATGACTTAAGTGCCTTCATAATTTATTAG
Protein Sequence: MPRSYKRLKPNKVQDPEVIKAAVEDITNGLSLRNAAVKYDIYYSVLYRHLKKGDLIKKKGGQTALTEEEEKTLASRLIICADWGYPIDSWTLRISVKESLDRQGRTIKKFKDNFPGRDFVYSFLNRHKADLSQRLCQNIKRVRAGVSPETVNEYFDRLEAELRDVPSSNIINYDETNLSDDPGKHKVITKCGCKYPERVMNSTKCSISVMFSAAGDGHLLPPYVVYKSLHLYESWREGGPDGSRYNRTKSGWFDNFCFSDYVETIALPYLRRLPGKKYMIGDNLSSHLSLDLIKKCAENDVLFIFLPAHSTHLTQPLDVAFFRHLKLAWRSILLDWKKGPGKNEATIQKSKFPSLLKKLCESCKSENVISGFRKCGIVPLNRKEVLKMLPSSDLSIESTQSSRATTPALSPVAAIDASFKELLTALRHTETVPARKKRVKVDVGPGKSVSVAEIPTEPDQAGPSTSVAGTSTDNDNSTGTRKQSVSARKKKNKKLDSESSPEDSDYSVQDSDSDLTLSNSSANAELSKELDRLIQPDDFVIVKVYGKTKNVFRMYVSKVTDFQDDGYVGLFCKKTLSSNMFSLTDEESFFSKDDVIKKLMPVVQTSKSASRWKDKICFQDDLSAFIIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01309320;
90% Identity: iTF_00757255;
80% Identity: -