Rmar007647.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ricinus marginatus
Gene Symbol
MTA1
Assembly
GCA_028565995.1
Location
JAOWBB010000012.1:419764-432944[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2 8.6e+03 -2.6 0.0 2 6 208 212 198 218 0.52
2 2 3.9e-11 1.5e-07 31.8 6.7 1 35 408 444 408 445 0.97

Sequence Information

Coding Sequence
ATGGCCGCTAATATGTACAGAGTCGGAGATTATGTCTATTTTGAGACATCTTCGACATTGCCCTATCAAATTAGAAGAATAGAGGAATTAAACAAGacGCCAAATGGTAACGTAGAGGCAAAAGTGATGTGCTTTTTTAGGAGAAGAGACCTTCCAAATCCTCTTATTGTACTGGCTGATAAACATCAAAtgaattctGCCAATGCCGATGATACACCAATTTCAGctaagctaaaaaaaattctcataaaagCTCCCTATCCTGCTACTGAAGATAATGAGGGTAGCGAAGGTCAtgaagaaggagaagaaggaGAACTTAAGGATAAAGAAAATAGTCTTACTTGGAAACAAAGACATCAGCTAAAGCATAGAGAACTTTTCCTTTCTAGACAAGTTGAAACTTTGCCCGCAACACATATTAGAGGAAAATGTTCGGTCACATTGCTTAATGAGACAGAATCTTTACTTAGTTACCTCAATAAGGACGATACATTCTTTTATTGTCTGGTTTTTGATCCAGCGCAAAAAACTCTACTTGCGGATAAAGGAGAAATTAGAGTTGGGAGTAGATATCAAGCGGAACCTATTCCCTTACTTAGAGAAggAGAATCTGATAATAGAAATTGTGAAGATCTCGAAACATTAGTTTGGACACCTAGCCATCACTTAACAGATAGACAAATAGATCAATTTTTAGTCATATCTAGATCAGTTGGAACTTTTGCGAGAGCTTTAGACTGTTCCAGTTCTGTAAAACAACCGAGTCTACATATGAGTGCGGCTGCTGCGTCAAGAGATGTCACCCTGtttcatgcAATGGATACACTTCATAATCATGGTTACAATTTATCAGAGGCCATTAGTAGGCTAGTCCCATCTTCGGGACCAGTATTATGCCGAGACGAAATGGAAGAGTGGTCTGCTTCCGAAGCTAATTTATTCGAAGAAGCGCTAGAAAAATACGGCAAAGACTTCAGTGATATTCGACAAGATTTTCTTCCTTGGAagacattgaaaaatattattgagtATTATTATATGTGGAAAACAACAGATAGATATGTGCAACAAAAAAGGGTGAAAGCAGTTGAAGCTGAATCTAAATTAAAGCAGGTTTACATTCCTAATTATAATAAGCCAAATCCAGCTGTTATCAACCACAATAAAGGAGTTTTAAATGGTAATAATCATGGTGATGGTGTTATTTCTGGTAAATCTTGTGAATCTTGCCAAGctaCAAATTCCAGTCAATGGTATGCTTGGGGACCATCTCATATGCAGTATAAACTTTGCCATTCGTGCTGGtcttattggaaaaaatacGGAGGTCTTAAGAATCCTTCGAGATTAAGTGAAAGTGATAcagatcttaaaaaaaaatcaggtagCATAtcagatgaagaaaaaattccttccaGTATTGCTTCTCATCGGCCTCATCGATGTACTGTAAATGGTTGTgggaaagaatttaaattaaaagcccACCTTGCAAGGCATTATGCTACAGCTCATGGTGTTGTGATAAGATCAGGGTCACCAAGACCTATCATGAAGACTAGAACcgcattttatttacatacaaCTCCATTGACCCGGCTTTCAAGGCGACTTTGTCGACATATAATGATGCCTAGGCATGCAGCAAGGTCACCTTTTTGGCCTATTAACGTGCCAGCTATTAAGCAAGAATgtCAGACACAAATGAGTGGTAAATCACTTTTAGAGCTTaaagaattgttaaaataCCGAAAAAAAGATAGAGGAAGTGTAACTCAGATTGCCAATAGATTGGGTGATCCAGATATTGTCCCAGAGTGGCTCTTGCCTACAGACAAAAATCTTATCCCGAAATCTTCTTGCATAATGTTTCCCAAACCGCCAAAGGGACCAGATGGAAGCTTGCTCTATGAACGAGTTCCGAATAAGCCTGAGGCTGAAAAAgcttctttaaataatatttctccaTCCCTGAAACGCCGGGCATATGACGAAAACGGTTTAGAAGATTTAGATTGGGATGAAGGTCTAGTTGTTCCTCAACCTGGTCCTCCAGCTAAGCGACCGAATAAAGAAATAACGGCTATTAGGGCATCTAGTGCATCTACAGAGGTCGGAAGCTTACCTTCTATTCCAGGAGTCCCTCGTTCAGTTGTTAATCAACTGAATGGGCAACCCCGGCCGAAAGTGGCCACAATGACTCGCACTGGTACAGGCCGAAAAGGAGTCATCTCGTGGATGGATGCACCAGATGACGTATATTTCAGGTCCACAATAAATTCAAGgaaaatgcGACGGCAGCTGACGGCTCAGGAATTAAGAAGGGCTTCGAGAAAACCCTGGAGAAAAATAACCGTGAAAGGAATGGATGACTTGGTTGTTCTCGATTGA
Protein Sequence
MAANMYRVGDYVYFETSSTLPYQIRRIEELNKTPNGNVEAKVMCFFRRRDLPNPLIVLADKHQMNSANADDTPISAKLKKILIKAPYPATEDNEGSEGHEEGEEGELKDKENSLTWKQRHQLKHRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKDDTFFYCLVFDPAQKTLLADKGEIRVGSRYQAEPIPLLREGESDNRNCEDLETLVWTPSHHLTDRQIDQFLVISRSVGTFARALDCSSSVKQPSLHMSAAAASRDVTLFHAMDTLHNHGYNLSEAISRLVPSSGPVLCRDEMEEWSASEANLFEEALEKYGKDFSDIRQDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNYNKPNPAVINHNKGVLNGNNHGDGVISGKSCESCQATNSSQWYAWGPSHMQYKLCHSCWSYWKKYGGLKNPSRLSESDTDLKKKSGSISDEEKIPSSIASHRPHRCTVNGCGKEFKLKAHLARHYATAHGVVIRSGSPRPIMKTRTAFYLHTTPLTRLSRRLCRHIMMPRHAARSPFWPINVPAIKQECQTQMSGKSLLELKELLKYRKKDRGSVTQIANRLGDPDIVPEWLLPTDKNLIPKSSCIMFPKPPKGPDGSLLYERVPNKPEAEKASLNNISPSLKRRAYDENGLEDLDWDEGLVVPQPGPPAKRPNKEITAIRASSASTEVGSLPSIPGVPRSVVNQLNGQPRPKVATMTRTGTGRKGVISWMDAPDDVYFRSTINSRKMRRQLTAQELRRASRKPWRKITVKGMDDLVVLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00362926;
90% Identity
iTF_00362926;
80% Identity
iTF_01308369;