Rmar015889.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- gata4
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010006164.1:36503-42634[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.2 2.1e+04 -3.8 0.3 1 6 234 239 233 243 0.65 2 3 6.5e-16 2.6e-12 47.1 0.9 1 35 973 1006 973 1007 0.97 3 3 2.4e-18 9.6e-15 54.9 5.7 1 35 1032 1065 1032 1066 0.98
Sequence Information
- Coding Sequence
- ATGGCAATAATCAGGGGCGGATTGCGGCGCTTAATTCGCCTTTCGGTTGAGTGGAAAAAGGCCGGGGGGGGTGGCTTTTATCCGTCGAAACGGAAAATCGGGCGAGTCGAAGCCGACGCGAAGCCATTCGACGGGAGGCGGAGAAATCGGGCTCTTTCCCGGGCCGACGttaaaaaggaggaaaagtcGCAACCGGGTACCTGCGAGCATTCGACGGCGAGTAGTCAGGCTCGAGTGCCGCGTTCGCTCTGGACGGAGCACCTTCCACCGGAACCGTGGCCGCAGCGACTCGTGCAATCCGCCATtgCTCCACGCCGATTGGACCGACGGCCGCCGATGCGCGACAGTTCGCGACCGGGATGGACGATGCCCGCAGGTATTCGCTGCAGGACGTGGATGGCGCAGGTTTTGGGGGCACTTCGCGGTTGGGGTTTTCCCGGGCACCTCGCGGATGGAGGGCGGATTTTGGTAACCCGGCTACGCCCACTGGGATGGGGCCTGTGCCCCGACGCTTCCCCCTCCCCGCGTCAGCATCCAGCGTCTAGTAGACGCCGCTCCTGTGTCAGTCGCGCAAGTCCCGATAAGAGTCCGACGCCGGAACTAGCTCCAGTGCTCCAGGCGAGGACCGGCGAAATTTCGGAAAGGTCGGGTCTCTGCCGATCTTGCTTTCCAGCCTTTCCTTTCGACGACTTCATGGAATGCGACAGTTGTCGAACGCAGGCCGCTAAAGCATCGCACGACCCAGCGCCatCTGATACCGAGAAATGGGGCCCCTTTAAGGACCCGGGACCGGGTCGGTCGAGCGCAACGGGGAAAAccccgaaaagggaaaattttccgaaaagagGGCCCCGTTTGCGCGAACGAACCCCCAGGGGCGGAGACGGGCCCTTCGACCGCCCGTGCGAGATGGTCCGATGGGCCCGCGAGCTGCGGAGGGCCCGAGCCGGCCGCCGTGCGTCATTGTTTGCCGACGGGGAGAGGACGCGGTTGTTGCGTGTTTGCACAGCAAGTCGGTGCGGCTGCGTCTTTGCCGTCATTGAGACTTCCTCTCCCGAAATGCGCGAGATGGATAAGGAAAAGAGTAAAATGATGACGGACATGGAAAAAAGCGGTGCGCTGCAGAATTACAAACCGAGCGAACAAACGTACAGGCTGCAAAACGCGGATCTCGTATATAAGGAACAAGAAAAACAATCAGTTATAACGTACCAGGGTTCTTTAAAACAAGGGATCGCGGCGGAGGAGAGACAGGATCCCATCGCGAAGGATgaaaaggaagaggaggaaagcGGAGATGCGAGCAAGGAGGGCGATCCGATAGGAtacaaaagaggaaaaagggagAACGAAGCCGGGAACATCATCAGGACGCTGCAGGTGGACAAACCCAGGACCGAGGTTCATTTAGTCAATTACGAGCATCAATACTCGAAAGAACCGAACAGGATACTGAAAGCGGACGGCTACGACTGCAGCTGGAACGAGAGAATGCACGGCGACGTTCCGGAAGAAAGTCAGAGGAGATCTAGTCACAGGGAAGGAAGCCTAAACCAAAGCGATTTGAACGTGTTCGGAGTTGAAGTATTGGGACAGAAGAAGAGAGTCGGAAAAGCGGACTGCGACAAGAAAGGCGATCATCCACTAAGGGGTTACGAGCGATATCCATCGGAAGGTATCAAGAAAGAACAGAGTGACGTTAAAAATGCGGAGAAGGTCTACGAGGAGCAGTCCCGGCACGACATGAACCCTCTGCCGGATTTTCAACAGAGCTACGGAAGGGAAAGGCACAGGGAACGTCTTTTGCAAAACTCGGATCTAGATAATAATTCAGAGGGTCAATCGGATAAAGTCAGATATCAAGAGAGGGATTTGTACCAAATGCCCCTCATGCAGAACGTGGAAAACGTAGTGCACGGGAGAATGTACGAGGTGCAGGAGAGGACCGGGGAATACAGAAAGTTGAGCTATGCCACATCGGAAGGCGAAAGTCCCAAACCAACCCAAATCAAGTACAGCGTTATGACGCATGCAGACAGGGATCCGATGCTGGCGGATTCCTTCCCGAACTCCCACAAGGTTGCCTATCCCGTGAACATACAAAGGTTCGCCGCGGAATATCGCATTAAATACGAGGACAACACCGATCCCATGGCCAACAGACAAGAGATAGAGCACCACAACCTCATAATCAAAAACTCGGCCATTCAGGAGCATATACAGACGAGCATGGCAGTGGAAACGTCAACGACGACCTACGCCACCTTGCAGACGGTCGCGCAACCCAACACCAACGTCTACAACAATCTCTATCCGATTAACGAGTATCACGAGGGCGGCTACATGCACAAGCAGCAGGGAAATTCGGATTTGTACGATATGAGCAGGAGCGGAGAGGATATTCCTAACTACAGGGCCACCAACGGGGAAGTTCCTCGCGAATACGGACACAAAATGGAGCACGAAGTCATCAACTTTCAGATTCCGTATGCCTTCGCCGACGGCAACCATCGCCTGCAGCAACTGCCGGCATCGGGTGAGATACATCAGCAGTACGTGGCAAAACAAGATTCgcaaatcggaaaaattcaGGaattggGTCTCAGTTACGATCAACCTCACAACAGCACCGCCAGCTCACAGATCATCACCCTTTACGGGCACCCCAATTCACAGTACCAATGCGCCTCAGGCTCCAACTTCATCCCGACTTCCGCTATCGAATACGAGTATTCCGGTGGAAATCACAACCCTGGAGGTAACCAAATAGTCGGTTCTTACTCCGATTACGTGCCCAACGCGGCCTCCACCTCTTGGGGCAACGAAAATTTCCGAAACGGTAAGCGAGAATCCTCGGCAGGAATTTGCTGCGGAGATTTCACCCTCGAAGGAAATCCCATTTCGGATGTGAAAGAGTGCGTAAACTGCGCTGCAGGAATAACTCCATTATGGAGGAGAGATGAAGAAGGTCACTACCTGTGCAATGCCTGCGGAATCTATAACAAAGTTAACGGGGTGAATCGACCACCGGTGAAGACGAGCAGCAAAAAGTACAGCAACGTGCCGCCGAACAACAGGAGGACAGGAGTGGAATGCGCCAACTGCCGGACGACGACGACCACTCTCTGGAGGAGGAATAACGCCGGAGAACCCGTCTGCAACGCCTGCGGACTTTACTTCAAGCTGCATGGGGTGAACAGGCCCCAAACCATGAAGAAAGACGGGATCCAGACGCGAAAGCGCAAGCCGAAGAGCTCGGCAATGCACCACCAGTTGAAGCAGGACAGGAGTCACCACGGTAGGGTTCTGGGACAAAAACTGGAAGCTCAGGGCACCGGATCCGCCTACCATCTCGACCAACGGGACATCCAGCAGTCTCTTCTGCTTGCCCAGGGAGAAATGCAGATGTTACCCGCCGAAGAACTGCTGCACACTCCCGACAGCCCGGTAATACCTTCCTCCTCGCATCTCAACCGGCACATATCTCAGCTTCCCCCGATAGAGCCCACTCCTGTGATACTTGACGAGAACGTTTTGCGGCACTGA
- Protein Sequence
- MAIIRGGLRRLIRLSVEWKKAGGGGFYPSKRKIGRVEADAKPFDGRRRNRALSRADVKKEEKSQPGTCEHSTASSQARVPRSLWTEHLPPEPWPQRLVQSAIAPRRLDRRPPMRDSSRPGWTMPAGIRCRTWMAQVLGALRGWGFPGHLADGGRILVTRLRPLGWGLCPDASPSPRQHPASSRRRSCVSRASPDKSPTPELAPVLQARTGEISERSGLCRSCFPAFPFDDFMECDSCRTQAAKASHDPAPSDTEKWGPFKDPGPGRSSATGKTPKRENFPKRGPRLRERTPRGGDGPFDRPCEMVRWARELRRARAGRRASLFADGERTRLLRVCTASRCGCVFAVIETSSPEMREMDKEKSKMMTDMEKSGALQNYKPSEQTYRLQNADLVYKEQEKQSVITYQGSLKQGIAAEERQDPIAKDEKEEEESGDASKEGDPIGYKRGKRENEAGNIIRTLQVDKPRTEVHLVNYEHQYSKEPNRILKADGYDCSWNERMHGDVPEESQRRSSHREGSLNQSDLNVFGVEVLGQKKRVGKADCDKKGDHPLRGYERYPSEGIKKEQSDVKNAEKVYEEQSRHDMNPLPDFQQSYGRERHRERLLQNSDLDNNSEGQSDKVRYQERDLYQMPLMQNVENVVHGRMYEVQERTGEYRKLSYATSEGESPKPTQIKYSVMTHADRDPMLADSFPNSHKVAYPVNIQRFAAEYRIKYEDNTDPMANRQEIEHHNLIIKNSAIQEHIQTSMAVETSTTTYATLQTVAQPNTNVYNNLYPINEYHEGGYMHKQQGNSDLYDMSRSGEDIPNYRATNGEVPREYGHKMEHEVINFQIPYAFADGNHRLQQLPASGEIHQQYVAKQDSQIGKIQELGLSYDQPHNSTASSQIITLYGHPNSQYQCASGSNFIPTSAIEYEYSGGNHNPGGNQIVGSYSDYVPNAASTSWGNENFRNGKRESSAGICCGDFTLEGNPISDVKECVNCAAGITPLWRRDEEGHYLCNACGIYNKVNGVNRPPVKTSSKKYSNVPPNNRRTGVECANCRTTTTTLWRRNNAGEPVCNACGLYFKLHGVNRPQTMKKDGIQTRKRKPKSSAMHHQLKQDRSHHGRVLGQKLEAQGTGSAYHLDQRDIQQSLLLAQGEMQMLPAEELLHTPDSPVIPSSSHLNRHISQLPPIEPTPVILDENVLRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -