Rmar016083.2
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- gata4
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010006344.1:14759-19095[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-18 9.6e-15 54.9 2.8 1 35 89 122 89 123 0.98 2 2 3.4 1.4e+04 -3.2 0.1 2 9 206 213 206 214 0.71
Sequence Information
- Coding Sequence
- ATGTGTCAACTGTGGCACTGTGTCCACCCCTTTGTGGCGAAGAGACGGAACGGGTCACTATCTGTGCAATGCTTGCGGCCTCTACCACAAAATGAACGGGATGAACAGGCCGCTTGTGAAACAGCCAAAGCGGCTGTGGCAGGAACGGGACCCCCTCCTGATCTCTACAAGGGCTGGGCTTTTCCTGATGCCAGGACCGTAACTTCGTCTAGGGAAGAAAAAACACCTCGGAGActgACGGCGAACAAGAGGTTAGGGCTTCAATGTTCAAACTGCAGAACGGTCACCACCTCGCTGTGGAGGCGGAATGCTCTCGGAGAACCCGTGTGCAACGCGTGTGGTCTCTACTTCAAATTACACGGAGTTAACCGTCCATTAGCCATGAAAAAAGACAGTATACAGACTAGGAAGAGAAAGCCGAAAGGATCGTCGAAAGGTGAAGGCGTGAACAACGTTGCTAGTCCCATCTCCAATTCTTCCTCAATATCCGTCGGCCCAGCACCCAAGAGATCCAAACTCGATCAAACTGATTCCTATGGAGACGGCAGAAACAGCCATCACCAGCAGATCACAACTCTCGTATCGAATTCCCTGTCAGCGTATCCATCCCTCTACTCTCAGTGCGGAAGCCACGAATCATCGTCGAAAATTTACTGCACGCCGTATCACACTCAGATCTCACACGAGGCTTACTACGACTTTGCTCAAGGTTCACCCGTCGACAACGAACCGTTGGCGACTAAACTGGAAGAACCGTCATCCCACGCCAGCAGTTCGCCTTCCTCGCCGAAAGTGGTGGAAATGGAGAGACCGAGGGCGCCGCCTCCGACCGCTGCATGCTTAAAAGCTCTTTATTCGTGCTGCTCCGGCGGCGGAAGCTTTACGTCCCGCGCCCCCCAGGCTCCGCTTGCGAGAGTGAAGCTGGCGATGGGTTGGTGGCGCCTGGTGGAAACCCAACTTTTCGACATATCCGCAAGGCATGCCTAA
- Protein Sequence
- MCQLWHCVHPFVAKRRNGSLSVQCLRPLPQNERDEQAACETAKAAVAGTGPPPDLYKGWAFPDARTVTSSREEKTPRRLTANKRLGLQCSNCRTVTTSLWRRNALGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGSSKGEGVNNVASPISNSSSISVGPAPKRSKLDQTDSYGDGRNSHHQQITTLVSNSLSAYPSLYSQCGSHESSSKIYCTPYHTQISHEAYYDFAQGSPVDNEPLATKLEEPSSHASSSPSSPKVVEMERPRAPPPTAACLKALYSCCSGGGSFTSRAPQAPLARVKLAMGWWRLVETQLFDISARHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -