Basic Information

Insect: Ricinus marginatus
Gene Symbol: ZNF341
Assembly: GCA_028565995.1
Location: JAOWBB010001285.1:34778-37006[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.2e-05 0.0021 19.4 0.5 2 23 193 214 192 214 0.96

2 12 1.4e-07 2.3e-05 25.5 0.4 1 23 220 242 220 242 0.98

3 12 0.014 2.4 9.8 3.4 1 23 274 296 274 296 0.96

4 12 1.5 2.5e+02 3.4 0.9 5 23 308 326 302 326 0.77

5 12 0.00059 0.1 14.1 0.8 1 23 331 353 331 353 0.95

6 12 0.0002 0.034 15.5 0.4 2 22 368 388 367 391 0.89

7 12 0.019 3.3 9.3 4.5 1 23 393 415 393 415 0.98

8 12 1.3e-05 0.0022 19.3 3.6 1 23 423 445 423 445 0.94

9 12 9.2e-05 0.016 16.6 1.9 1 23 451 473 451 473 0.97

10 12 0.00018 0.03 15.7 0.5 3 23 480 505 478 505 0.89

11 12 2.9e-05 0.0049 18.2 1.7 3 23 513 534 512 534 0.98

12 12 1.6 2.8e+02 3.3 4.0 2 22 544 564 543 564 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.2e-05	0.0021	19.4	0.5	2	23	193	214	192	214	0.96
2	12	1.4e-07	2.3e-05	25.5	0.4	1	23	220	242	220	242	0.98
3	12	0.014	2.4	9.8	3.4	1	23	274	296	274	296	0.96
4	12	1.5	2.5e+02	3.4	0.9	5	23	308	326	302	326	0.77
5	12	0.00059	0.1	14.1	0.8	1	23	331	353	331	353	0.95
6	12	0.0002	0.034	15.5	0.4	2	22	368	388	367	391	0.89
7	12	0.019	3.3	9.3	4.5	1	23	393	415	393	415	0.98
8	12	1.3e-05	0.0022	19.3	3.6	1	23	423	445	423	445	0.94
9	12	9.2e-05	0.016	16.6	1.9	1	23	451	473	451	473	0.97
10	12	0.00018	0.03	15.7	0.5	3	23	480	505	478	505	0.89
11	12	2.9e-05	0.0049	18.2	1.7	3	23	513	534	512	534	0.98
12	12	1.6	2.8e+02	3.3	4.0	2	22	544	564	543	564	0.88

Sequence Information

Coding Sequence: atgactgATGAGAAGACTGAAAATTTGGCTTGTGAGAAAGTCCTCTCAGACATTGTAGAATCGGGCGATGATAAATTATCCTTGAATCTTTGCACACTACATGCCACTAATGGTaccgaaggaaaaattcagcTCATGGATGATACAATTCCTTCAggagctttttccttttttattggGACTAACCAGATTTTCATCACAAATCCAATACAATTAACCGAGCTTACAAATCAGCTACTATTGGCTCCAGttgctaaaaataaatctgatttgAATTTAACTTCAGAAAATACAGAAAACTTTACCGCACCTGTGGATGCAAAAGTGCTatctgataatttaattttaacaggcCCAAAGTTAGATAACAaaggaaataatgaattaatattaaccgCTGAAGTTACCAATAATGCTTccgtaataaattttgaacctCAGTGTGATAAAAtccatgaaattaattataacgaaaatgataatttaactCTTCAGAATAATATGATATTAGAATTTCAATACGGAAGTGATGGcgttatgaagaaaaataagattgaTAAAACCAAAACGAAATTATCTTGCTCGTATTGCGGaaagctttttgaaaaaccttttaatCTGCAACAACACGAGCGTGTTCATACAGGAGAACGACCGTTTCAGTGCGTTATTTGCGGCAGGGCATTTTCGCAAAAGGCAAACGTTCGGAAACATATGATAAGGCATAAGGTTTGGCCTCAGGCAAAACAAACATTGAAGATTAGAAAGAGTCAAGATGAAAAAAGCGCAGATGACAATAATATCTTAGACAGAACAAGCTATTCATGTCAGTATTGTTCTTTAAGTTTCAGTTCTTACTCCCTGCATAAGAAACATTTAGTTGTACATTCAGATTTTAAGgtttatcGTTGCATTCAAAAAGGTTGCGATGAAACTTTTAGTGATTTAGATGAATTTTTGTGTCATTCAGAGAGTCATTCATCGGCTGAATTTCAGTGCCACGTCTGTCTGAAAATGTTCACAAGCCTGGAAGGTTTAGGAGCACACCAGTATGACCATGATTTACCCAATCGCATAAAGAAGGATTTTAATATAAAACTGAAATGCGAAATATGCCATGCCCAGTTCAAATCGGCAGAATCGCTCAAAAATCATCTAGCCGTGGACACACACAACTACGAATGTCCGCATTGCAAGAGCGTTTTCAGTTGCGAACGTTTCTTACGTCGACACCTTGCCACTCATTCTGATCCGTCTCAGTCGAAGTTCGAATGCGAATATTGCAAGAAAACGTTCAGAacccaaaaatatttaaacaatcacAGTTTCATACATTCGAAAATAAAGCCTTTTAATTGTGAGCTATGCAGTAAACAGTTTGCCTCCAAATACAGACTCAAAAGGCACTTAACCATACATATGAGCCAGTATTTGGAATGTCCATTTAAACCATATCTTGGatgcgaaaagaaattttaccgGAAAGACAAATTAAGAAATCATGTCTCCACACATTGCCACTTTAAAATTCGACTATGTCAAATATGTTCGAAAACATTTACGTCGTTTGTAAAATTGCAACAGCACATGAAAAGGGATcacaatttgataaaaaagaagCAGATTTTGAAATGCATTAACTGTTTGCAAACTTTCAGAAAACAGAGACAATTGTTGCAACATCACTGCACTGTtggggaaaagaaatttaagtcGCGTGTGCGACAATTGAAAAAGTCTGAAAACGGAAAACCCCCTAACGAAACTGATACTCCGGAAATGGTGTCtaatatagaaattattatgGTGCCTTACATTATTAATAGTGATAATACGTAA
Protein Sequence: MTDEKTENLACEKVLSDIVESGDDKLSLNLCTLHATNGTEGKIQLMDDTIPSGAFSFFIGTNQIFITNPIQLTELTNQLLLAPVAKNKSDLNLTSENTENFTAPVDAKVLSDNLILTGPKLDNKGNNELILTAEVTNNASVINFEPQCDKIHEINYNENDNLTLQNNMILEFQYGSDGVMKKNKIDKTKTKLSCSYCGKLFEKPFNLQQHERVHTGERPFQCVICGRAFSQKANVRKHMIRHKVWPQAKQTLKIRKSQDEKSADDNNILDRTSYSCQYCSLSFSSYSLHKKHLVVHSDFKVYRCIQKGCDETFSDLDEFLCHSESHSSAEFQCHVCLKMFTSLEGLGAHQYDHDLPNRIKKDFNIKLKCEICHAQFKSAESLKNHLAVDTHNYECPHCKSVFSCERFLRRHLATHSDPSQSKFECEYCKKTFRTQKYLNNHSFIHSKIKPFNCELCSKQFASKYRLKRHLTIHMSQYLECPFKPYLGCEKKFYRKDKLRNHVSTHCHFKIRLCQICSKTFTSFVKLQQHMKRDHNLIKKKQILKCINCLQTFRKQRQLLQHHCTVGEKKFKSRVRQLKKSENGKPPNETDTPEMVSNIEIIMVPYIINSDNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01308200;
90% Identity: iTF_01308200;
80% Identity: iTF_01308200;