Rmar025853.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ricinus marginatus
Gene Symbol
CAMTA2
Assembly
GCA_028565995.1
Location
JAOWBB010009301.1:68768-90564[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-48 7.7e-44 149.1 2.7 2 116 45 157 44 157 0.98
2 2 0.26 4.7e+03 -1.7 0.6 5 68 1288 1355 1284 1377 0.66

Sequence Information

Coding Sequence
ATGTTCGGGGTGAGACTCCTGATTGGCATCTGTCCGAATTCTTTTTACGTTCCTCCAGGGTTTGGAGatggaGAACCAATCAAGCTGCCTGACAATTTGGAAAGTGTTCCAAAGGCTGAGCATTTTCCAACCCAAAGGCATCGCTGGAACACGAATGAAGAAATAGCTGCAATTCTAATAAGTTTCGATAAACATAATGAATGGCAGTCGAAGGAAGTCAAAATCCGGCCAAAGAGCGGTTCAATGCTTCTTTATAGCAGAAAGAAAGTGAGATATAGAAGAGATGGTTACTGTTGGAAAAAACGGAAGGACGGAAAGACTACAAGAGAAGATCATATGAAACTTAAAGTGCAGGGAACGGAGTGTATTTACGGGTGTTACGTTCATTCGGCTATTCTACCTACTTTCCATCGACGGTGCTATTGGCTTCTTCAGAATCCGGATATAGTTTTggtacattatttaaatgttcctTATCCGGATGACAATAAACTGGCAGTGATTGCTCCATCTTTAGCACTTTGGGGTGACAAGAAGGAATGGACGAAGGAGGAATTGGTTAGCCAGTTAAAGCCAATGTtttATTCGGAAGACGAGCCTGATCTTAATAATGAATTGGAAATATCGACGGCCGAAACTGTGGAGGCAATAGTGACgcaattaatggaaaaacagAGGGCTGCACGCGCAGCAACATTGACAAAGCAATTGGAGTGCGGTTGCCCTGATTCAACTTGTGCGGATGGTAAAACCTGCGCTCATCCAATGAGGCGAATCACTGCAGCAAATATAAAGCAGGAAACTAATTCAAGGCTTGGACAATTGGATAGTAATAATCagGTGTCGTCAACTACCGGTTCCGGCATGGTTTTAACGAGTACAAATAACAATAGTACACATTCCACAATCCATCATCGAGTCAACAGGAACGAGAGATACCACGGAAGTCAAACTCATCAATCTCCTCTTGTTCTCTCTCTGTCTCAAATACAAGGCGGAGCTGGCTTGAGTCTTTCTCAAATACAGGGAGGAACGGGATTGCTGATTCTTAACAGCACTGCTGGTAATACAAATTCTTCAAACCATTCAACTTCATCGGTAGCCATGGTGACCAGTTTCAAATGTAACACGGCGGCTAACTCTGCTGCTGCTCAACAGCCACCCCTGAAACAATACCATCATCCTCGAAATAAGattgttTTAAAGCAGGAATCCATGGATACAAATCAATCGACATGTTGTGGACAGGAAATTACATCCTCAAATAGCTCCCAACATAAGGTTGACGATTCTAAGAGTAACATACCGAGCATATCTGTTACAACAATTACACCTTTTGAAAGCAGTTTGTTTGCTCGAGATAAAACCGAAATAACTAAAGTATTGAGTAGCGCTCCTGTCACTTCCACGAAATGTATGGATACCTCTGAAAATTCaggAAATAATCTACTTATATCAAATGCAACAGATTCAAACAGAACATCAGTAACAAGTGGAGTAAACGGCTCTAATTTTTACAACGAAACTTTAGATCTCTCCCAGGAAGATATACAGCGAACATTGTCTGCCAATATGCCGATGACGGATTTGACCCCTCAGAGaagaaCATCTCAACACAAGTCCCCGTCTCCGGCCTCATCTGTCATCACACCAGATGTTATGGTATCGGAAATGAATCCTATGGAATTAATGGATTCACCAACAAATGCTGTTGATGATGACGTATTTGTTAATTTGGATGCTTTTGATATGTTGGGCGATTTTCCAGAGTTAGAGATATTAGACCATTCGGGAGCCAACACAAGTGAAACCGGAAAGGACGTAAAAGAtgaatcatcatcatcaacatcCAGTCTTCGTGTTGATTTTAGGGAGGGTTCTGCTTCTATAACTGATTATTCACCAGAATGGGCCTATCCCGAAGGTGGCGTTAAGGTTTTGGTTACTGGTCCTTGGTATTCTTCAAATTCTCGATATACTGTTTTATTCGATTCATTTCCTGTTCCTACGTCTCTTGTTCAATCCGGCGTCCTGCGTTGCTTTTGCCCAGCTCATGAGGTTGGTCTTGCAACAGTTCAAGTTGCTTGTGAAGGATTCGTGATTTCAAATACCGTAATGTTTGAGTATAAAAGGCCTCCTACAGatgattcaattaaattaaaagaacccAAACTAGAAGAGAATGAAAATCTGCTCAAATTTACTCTGTTACAAAGATTGGAAGCTGTTGATGGTAAATTGCAGATCAAACAAGAACCAGGAAATAATGATAtggtTGATTGTTCTGGATATTATCATCaggtaattaattttgagGAAAGGATGGTCAATTACTGTCAGAGTATGACAAAAAGACCATGGTCGAATGAAGAAGATACTAGTGATTGGGTGTCAGGTCAGAGAAGGAtgaatttattgcatttgGCGGCTTCTTTAGGCTATGCCCGATTAGTTTGTGCTTTACTTCACTGGAGAGCTGAAAATAGCTCCCTCCTCTTGGAAGGTGAAGTCGATGCTCTTAGTCAAGATGCTGAGGGGTTTACGCCACTGATGTGGGCTTGCGGTAGAGGTCATCGAGAAGCTGCCCTGGTTTTATACAGATGGAATTCTACCGCACTTAACATTAGAAATTCATCTGGTCAGACTGCTTTGGAATATGCAAGAGCTCAAGGTCATGGAACGCTGGcggatgaaattgaaaaattagatgCAACGAGAGAAGAAACAAATGCAATTTTGTTAGCAAACAACTCAAATAATTTAGACAGATCTAGTCAGTGCGATGTTACCCCTAGTGTGTCTCCAAGTTGTTCTGTCATTTCTTTAAACTCATCCAAATCGCATGACGGTGTTTTCTTGCGGCCGGATCCAGTTTCGAGATCAGAGTGtggtttgaATGGTGGTCATAATCACAACGAACCTCAGCGATTAATTAAGAGATCGTCCATAGATTCTGGTATACATTTAGGATCGCAATCTGATAATCTTCCATTTTTACGTTCTCCTCGTTATAAATTCACCAATGGAAGAGAAACTCCTAAGTTATCAAGGTTTGATCGCAGCATGTCTTTACCATCTCCGGTAATGTGCGAATCATATGAATCGGAAAACCGACGAATGGATTTCATTCTGTGCGAAGTTGCCGCTACTGGAGCAGACAACAACGGTCCCGTAATCAGTATGGAAAATCTGTCTGAGGATgatactaaaattaataattgtcaAACTGgtGAAGAAGAGGTTCGTGTATTAACATTAGCAGAACAGATTATTGCGGCAATCCCAGAACGAATTAAGAATGAAAGTGAAGAAATGCAACTGGATGCTAGTCCGACCGGAGAATCTTCTCTCCTTAGCGATAGATTGAGTGATTCATTAATAGAACCATTGCTTGACGAGCCGTCATCATCATATCAAGCtgcggaatttaattttgaattcagcGATCACAATTATAGATATTACGAAGTGGGAACTCCCAGCTCAAGCTTAAGTCCAGCTTCGAGTAGCTGTCTGCATTCTCCGTCTCCCGGATTTCCCTTGGATTCACCTTCTCCACCACCGACGACTCAAGATTTTTGTGAGTTCTTCCAGGCTACAGGATCCATATTTGAGAAGGATTTTTCCAATCTCACTCTATCAGacCGAGAGCAGAGAGAGTTGTATGAAGCTGCGAAAATTATCCAGAAGGCATATAGATCGtataagggaagaaaaaagctAGAAGAAGACAAGGAAAGAGCAGCCGCAATACTTATCCAGAATTATTACAGAAGATATAAACAGTATGCATATTTCAAGCAAATGACAAAAGCCGCAATGGTCATTCAAAATGGTTATAGATCCTACTGTGAAcataaaagattcaaaaaatcTCAGGAAGCAGCAGTTTGTATACAAAATTACTACAGAAATTATAAAGAACAGGGCGAATCCAAAAGGGCATCCAGAGAGAGTACTCCCTCTACAGGGTTGAAgcGAACTTATTCTCAAAGAAGACAACATCAAGCAGCCTGTAAAATTCAGCAGTTTATGAGACAATCGAAAAATAAATTGCAGAGAGAGCGAGCTTTGGCAGCAGAAAAAGAGAAGCAGGATGCCCGGCAGTGCTCCCAGGTTGTCCGGCCAAGGTCGCAATCTCCAGACAATTTCGGTCCAAATAATGAGTCTTAA
Protein Sequence
MFGVRLLIGICPNSFYVPPGFGDGEPIKLPDNLESVPKAEHFPTQRHRWNTNEEIAAILISFDKHNEWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVIAPSLALWGDKKEWTKEELVSQLKPMFYSEDEPDLNNELEISTAETVEAIVTQLMEKQRAARAATLTKQLECGCPDSTCADGKTCAHPMRRITAANIKQETNSRLGQLDSNNQVSSTTGSGMVLTSTNNNSTHSTIHHRVNRNERYHGSQTHQSPLVLSLSQIQGGAGLSLSQIQGGTGLLILNSTAGNTNSSNHSTSSVAMVTSFKCNTAANSAAAQQPPLKQYHHPRNKIVLKQESMDTNQSTCCGQEITSSNSSQHKVDDSKSNIPSISVTTITPFESSLFARDKTEITKVLSSAPVTSTKCMDTSENSGNNLLISNATDSNRTSVTSGVNGSNFYNETLDLSQEDIQRTLSANMPMTDLTPQRRTSQHKSPSPASSVITPDVMVSEMNPMELMDSPTNAVDDDVFVNLDAFDMLGDFPELEILDHSGANTSETGKDVKDESSSSTSSLRVDFREGSASITDYSPEWAYPEGGVKVLVTGPWYSSNSRYTVLFDSFPVPTSLVQSGVLRCFCPAHEVGLATVQVACEGFVISNTVMFEYKRPPTDDSIKLKEPKLEENENLLKFTLLQRLEAVDGKLQIKQEPGNNDMVDCSGYYHQVINFEERMVNYCQSMTKRPWSNEEDTSDWVSGQRRMNLLHLAASLGYARLVCALLHWRAENSSLLLEGEVDALSQDAEGFTPLMWACGRGHREAALVLYRWNSTALNIRNSSGQTALEYARAQGHGTLADEIEKLDATREETNAILLANNSNNLDRSSQCDVTPSVSPSCSVISLNSSKSHDGVFLRPDPVSRSECGLNGGHNHNEPQRLIKRSSIDSGIHLGSQSDNLPFLRSPRYKFTNGRETPKLSRFDRSMSLPSPVMCESYESENRRMDFILCEVAATGADNNGPVISMENLSEDDTKINNCQTGEEEVRVLTLAEQIIAAIPERIKNESEEMQLDASPTGESSLLSDRLSDSLIEPLLDEPSSSYQAAEFNFEFSDHNYRYYEVGTPSSSLSPASSSCLHSPSPGFPLDSPSPPPTTQDFCEFFQATGSIFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRKKLEEDKERAAAILIQNYYRRYKQYAYFKQMTKAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGESKRASRESTPSTGLKRTYSQRRQHQAACKIQQFMRQSKNKLQRERALAAEKEKQDARQCSQVVRPRSQSPDNFGPNNES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01308018;
90% Identity
iTF_01308018;
80% Identity
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