Rmar007102.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- ncor1
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010000011.1:2636381-2645280[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 3.4e+03 -0.8 0.1 19 36 296 314 293 314 0.84 2 2 3e-08 5.7e-05 24.1 0.0 4 43 859 898 858 901 0.97
Sequence Information
- Coding Sequence
- ATGAGACGAGGCGAATGCATGGATTTCGACGCCGGTTTCTCTCGCTCTGCCACGGACTCGAAGagcgttttaaattttaggcaGAGCTCGGACGCCGGAAGATTCGTTTCGCTCCCGGACGTTAATCGTTGTCGGTCGGACGAAGTGATGCCCGTCGTCGTCCGCAGCGTATCCGCAACTCTAACGAGCCTTTCCTTCTTGATTTCCAGGTCAAACACGCAGTCGACCGATACCTCGCCGTTCAAAAGTCAACGAGGATCGACGGTTCCGTCGCCCTTGTCCCCGGGAGCGCGCCAGCCGGGCGTGTACCCGTCGTACCAGGCGGGAAATGCGCCGGTCACTCGCGAGGCCCAAGCCATGCGCTACGTCCAGCCGTCACCTTATTCTGCTCCCGTGCCATATCGGGATGTACCTAGTCCGTACAGGTCGCAAGTAAGTATGAGCTCGAACTTTTGGTTCTACGCTGGGTCGGAGTTGCCGAAGACGCTTCTTTGTAAGCGGGGACAGCGTCGAGTGACGTTAATGCTCGAGATAAGCGCTATCTCGCCGCTTGATGTTGATTTTGTCTCGGATAAAGGCGGGAGAAAAGCGGGCGATTGGGCGCCGGATATCGTCATTTGGTTGCCTGTGCAGCGTCGGAAGATCGCCCTCGGGGGCAAGTTGCTGGCCTGCCGTTCGGAAAACAGTTTTGTCCGGAAGCAACTTTCGCCGCGGAGTCAAAGGTGCGATCTCGGAGTGTCCGTCTTGGATTCGCGGAGACGTTCCACTGCAAAAGAGCAAGAAATCCGCATCGGTTTCCTTGTTTCGTTTCACGTGAATGTACCATTCGGAGACCGTTTCTCGGATAAGAGCGGAGCACAAGCGGAGCAAGGTGGGAAAcatcgtttaaaaataaattgtccgGGATCGATAAAAGAGGAATTGGGCCGCAGAAGTAGAAATTATCGAGCGGACAGGAGGGAAAGGGGAGAAGGAAAGGGCGGGAGCTTCCTTTCTGGTCCCACGTCCGCGGAGCCGTCGAGACATTTCCGTTTGGAGCCGGACGCATCGCCACAAACCGCGTCCCGAAAATTGATGTCTCGATTCGCAGGGGCTTCGGAAGCGAGGAGCGGGACTCCCCAGGTGGAATACGTGAACTTGCGAGGCGGGGAGAGACCTCGGATATCTCTGCTCCCCCCCGCCCAGGATTACGTGACGCCCATTCCTCGTGCATCCTGCAGGGATGACATCGTATCTGTCAGGCATGCCCGGACCGAGCGCGCCGAATATGCGCGAGGTGCCGGTTTCGATGATGTTCCCGCAACGACTGCCACGTCCATCGGACGTTCCGTGCATTGCGTCTTGTCCCGAACCCCGTGTGGCCTTTCCACCTCCGTTTGCAAGCTGCGAAAATCCCTCCGGGATTATTACGCGGAAGGGAAGGGGGTTTCCGAGAATCTTTCTGTTTCCGGCGCCAGCACGGCTACGTTAGGCATTCGCAATGGGGTATTTCCCGAGAAGCTCACATGGCGGGGCGTGGATCCCCGGGCACCGGGGATCGAGGCATTTCCGCCTGTCGCTAAATGCAACTCGATTGTCACGTGCTCCGTTGCACTCTCGAGGAAGCCCTCCCCGGTACCCGTTGCTCAGCAGCCGCCTCCTCCGCCGGCTCAGCAGGAAGTTGGTCCCCCTTTCAAGAAAATCCGCCTCGGAGAAACAAAACCGGATCTCCAGCAGCCTTTGAGAATAGACGTCCGGgaACCTACGGTTGCCTACACTCCCCAGGTGGAGGCAATATCTCCAACTTTGCCCTCGGAAGACATCGCTCTCCGTGCAACGAAGGAAGATCTGCTGCAACAAATTAACAAAGTTGACAGGGAAATAGCGAAAACCGAGCAGCAGAtcgtaaaattgaaaaacaagcAGAGAGAGCTGGAAGAGGCGGCGTCCAAGCCGGTTCcgaagaaagaggaaaaagaagcagAGCAACCGAAACATCAAAGTCTTgcgcaaaaaatttatgccgAAAACAGGAAAAAGGCTCAGGAAGCACATGCGCTGCTGGATAAATTGGGACCGAAGATAGAAGTTCCATTATACAATCAACCATCCGACACAACTGTTTATCATGAGAACAAGAGACGACATTTGGCatttagaaaaagattaatagaATATTTGAGAAAGCAAGCTTTGGAAAAGCAAGCTTACGAAAAGTATTTAACAGTAACTTACAGCAAGCTTATGTCAGAATGGCTTAGAAAAGTAGATAAAattgaaaattcaGCGAAGAGAAAAGCAAAGGAAGCTAAAAAtagagaattttttgaaaaagtttttccggaaCTGAGAAAACAAAGAGAGGACAAAGAAAGGTTCAATAGGGTCGGTGCAAGAATTAAATCGGATGCTGATCTGGAGGAAATAATGGACGGATTACAGGAGCAGGAGatggaagataaaaaaatgcgTTCATATGCTGTGATACCTCCCATTTTATTGGATTCTCGACAAAGaaggataaaatatataaataataatggacGATTAGAGGACTTTGCTAAAGAATATAAGGAGCGACAATTACTGAATTTTTGGACAGCGGCGGAGCATGAGATTttcaaggaaaaatatttgcagcaTCCGAAGAATTTCGGATTAATAGCCAGTTATCTTGATAGAAAGAGCGTTTGCGATTGCGTCCAAAGGTATTATCATACGAAGAAACAAGAGAATTACAAACAATTGCTAAGAAAGTCACGGCACGGACGAACGAGGTCAAGTCGGAACAATCCAAATGCAAAAGTAAACAATGCTAATGCAGCATCGGGGGCGTCTCTCGTCGACTCCGTGCTTTCCACGACCGGAGTTACGACGCGGCTTCAAAGGGAACAGCTTCAGAAGCAAGAGCCCAAGGAAACAACGAATCATGTGATTTTAAGTGATAGTCTAATTTGTAATAGTGGATCTAGCCTAATGATAAACACGACAGCGGTCGTAACAACTGTTAGCTCGAATGCTATTTCCTTCTCgaacagtaataataatagtgcCAATAAAGAACTCGATAAGGACATAAGTACGACTAATATAATGCAATCTACGAGTACAGCTGCTACCACTTCCATCACGGAAAAcaaggaaaacaaaatgagCGACATCAAAACGGAAAACAAGAAGGAGAAGAGGCGGAAAGGggacaaaaagaaagaagacgTGGAGACTTCCGACGAAGAACTGGGAGAGTCCGTTGGTaagtggaaaatttctctCTGCACCCTTTCCTCGCCCCTGCCGTTGAGGTTTTGGTGA
- Protein Sequence
- MRRGECMDFDAGFSRSATDSKSVLNFRQSSDAGRFVSLPDVNRCRSDEVMPVVVRSVSATLTSLSFLISRSNTQSTDTSPFKSQRGSTVPSPLSPGARQPGVYPSYQAGNAPVTREAQAMRYVQPSPYSAPVPYRDVPSPYRSQVSMSSNFWFYAGSELPKTLLCKRGQRRVTLMLEISAISPLDVDFVSDKGGRKAGDWAPDIVIWLPVQRRKIALGGKLLACRSENSFVRKQLSPRSQRCDLGVSVLDSRRRSTAKEQEIRIGFLVSFHVNVPFGDRFSDKSGAQAEQGGKHRLKINCPGSIKEELGRRSRNYRADRRERGEGKGGSFLSGPTSAEPSRHFRLEPDASPQTASRKLMSRFAGASEARSGTPQVEYVNLRGGERPRISLLPPAQDYVTPIPRASCRDDIVSVRHARTERAEYARGAGFDDVPATTATSIGRSVHCVLSRTPCGLSTSVCKLRKSLRDYYAEGKGVSENLSVSGASTATLGIRNGVFPEKLTWRGVDPRAPGIEAFPPVAKCNSIVTCSVALSRKPSPVPVAQQPPPPPAQQEVGPPFKKIRLGETKPDLQQPLRIDVREPTVAYTPQVEAISPTLPSEDIALRATKEDLLQQINKVDREIAKTEQQIVKLKNKQRELEEAASKPVPKKEEKEAEQPKHQSLAQKIYAENRKKAQEAHALLDKLGPKIEVPLYNQPSDTTVYHENKRRHLAFRKRLIEYLRKQALEKQAYEKYLTVTYSKLMSEWLRKVDKIENSAKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSDADLEEIMDGLQEQEMEDKKMRSYAVIPPILLDSRQRRIKYINNNGRLEDFAKEYKERQLLNFWTAAEHEIFKEKYLQHPKNFGLIASYLDRKSVCDCVQRYYHTKKQENYKQLLRKSRHGRTRSSRNNPNAKVNNANAASGASLVDSVLSTTGVTTRLQREQLQKQEPKETTNHVILSDSLICNSGSSLMINTTAVVTTVSSNAISFSNSNNNSANKELDKDISTTNIMQSTSTAATTSITENKENKMSDIKTENKKEKRRKGDKKKEDVETSDEELGESVGKWKISLCTLSSPLPLRFW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -