Rmar000416.2
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- Bdp1
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010000001.1:2807410-2811978[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-09 9.5e-06 26.6 0.0 3 43 482 522 480 524 0.96
Sequence Information
- Coding Sequence
- atggCTTCGAGAAGATCGCGTTTGAAAGCTGTGGCGAATCTTCCCGTGAGGAGGAAACCAGCCCCACAACTAACGATAGAAGATTCTAAGGTTCAGAGTGGTGAAACAATTGAGTCTACTTTGATAGCGAACGAAAGAGAAGAGGACAAAGGaggaaatttagaaaattcaaatcatgtaattaatgaaattccaGCTGGTGTTACTGCCAGCGTTGCCGGTGATACCTTAGATAACTCATTGTCTTTTAATAGTACAGTTGACAGTGTTCAAGATATCTCTGTAACAGTAAAAAGTGTTGCAAATGTGCTCAAtcatactgaaaatttatctgttaAATCAAACCTTTATAAGGACACCACAGGATCTTTTCAGTTTGGCAGAAGAATCAAACCATCAGTGAACCTTGCTGTTTTAAAAGAGAGACCCAAAAATCctgagaaagaaaaactaattttaaatgatagtGAATcagttggaaaagaaaatcacttTAGCTCAAATACAGATGataatttcaatcattttgaaaacttaattaaaagtaCCAGAATTACAGAAAcccataataataaagtatatacagttgaaaataaagttagaTTGGAAGATAATGATAGAGATGAAACAagtgaaacagaaaatgaaattattgaaaattttagtaaggaaaatgaaaacacttCTGAATCTCAGTGTTTAAATgtagaagaaaatttgcatAAGCAAGATGCTAATTTCTTACAAACAAATGTGGTATCTTCTTCAAACAGTTCAAACCAGAGTATATCAGAAAatgctttattatttgatgcaaatgaagaagaagagaatAGCCTTAGacaaacaaatgaatttttaattgccaaTAATAGCAATAGTATTTCAGATTCCTGTCTTAAATCATCACATAATAATACTCAGTTACAACTTGGTTCATTacatggtaaaaaaaatactttcttaacaaaaccaaaaaaagttaaatatattgattttagtAAGAAAGTTGCAGAAGCAAAGAAAGAATTccaaaaaaagtatgaaaaactTATTCCAGATCGTGGTGACttgaaaatgattgatttaattttttacaatccaATTGGAAATCCTATGGAgtcaaaatgtaaaaatgttaaaagtaatttaaatttaaataatcaggAATTAATGTCTGAAGACAATGTGGACGATCCGGACCCTATTGATAAACAGTTGGATGAAAATAATGACTCTGAAATTCTTGGTGAAGATATTGGTAAAATGCCAGTTCCACAAGTGAAAATTGGTCCAAATGGTGAAATTATTCttgatgaaaaaagtttagtAATTGAAACAACTGAAGTGAAAAAAGGCAGggaggatttaaaaaattcagttccaatctatgaagataaaatttcaaaatgttattatCATAGGAAAACCCAGAAAACTAGAGACTGGACTGATTCTGaAACTAAAAGGTTTTACAAAGCTTTAAATACAATTGgaactgatttttctttaatgttgGAATATTTTCCCTATCGAACGAGATTGgaattgaagaataaatttaaaagagaagaaaaacttaataGGCAACTTGTAGATAAGGCTTTAAAAAATCCATCAGAGTTTGACATACatgagtttgaaaaatatttggcTTTGGAAAAGCAAGAAGagcagaaaaaagaattcgaGACAATGTTATTGCGccgtaaatttaaatgtaaaaagccGCTAATCAAAACCAACCGGAAGTCATCTTTGCTAGCAAAGGAATTGTTGCTAACCGACAGCAGTGTAGATGAAGCGCACATTGGTTCAAATTTGAAGCACAGCAAGCTGAGTTTGGAAGagaataaaaccaaaaaatcaaatgaaattgatttattatgtggaaaatatttttcgttagaAGGGGAAGATATTCAAGAGGAATTTCTGAAACTTATAACATCCGCGAATAACAGTTCTTCATCTGATCCTTATATCAAAGATGGAACAACCGAATGTGTCAAAGTGAATAAGATTCGAGATGCTCTGGTGaagataaagaattttaacctgaccgaagaaaaaaattgtgaaaatttaattattcatgatGATGTAGCCATCGAATCGAGAGTTGATAACACTAGTTGCAACAGGTCTGATGTAGTAGATAAGTTCTACGATGCTGTGGTGAGCTTATCTGAGTcgttaaaatcaaatgatgtaaacaatttaaagTCGAGGCGgtttcgcaaaattttaagcaagTCAAGACAAGGCAAAGTTTGCGTTTCAAAAAATGGGAAGAGAAAATTAGGTCGAAAGAACAAATACAAAGAAGCGAACTATCCGTTTGTTAATACTCTAGACGTAGAGACCTATGATTCGAAATATGACAGTAATTCTTCATCTAGTGAGTCCAACGACAACAGCATTGTATCGATGAAAACCATAAGCGACGAAGAGTTCGTAAAATTGCTGGCGGCCAACGTGAGTAATATGaaggaatcaaaaataaaatttcaaataacggAGGGATgctctttggaaaaaaatgttgaaattattttggataaTGTGCCTTCTACTGCGCTGAACGAAATTCAGAATGAGAATGAGAGAACTGATGTCGAATGCAATAGAAGAATTATCGAGGATGGACGCGATGTGGAGGAATCAGGGGAAGAGGAACGAAACATTGTTTTACCTATCGGATCACGTAGCCCACGACGACAGGAAACATCTGTAATTGTGAGAAATCCTCATGCCATTATGAGAttaggaaaagaagaagaagtggAGGTGCCCACAGAACATGAGGGTGTGAGGAAATTATTCGGAATCGtcaagaaaggaaattttttgaaaaatattgataacgAAGACGAATtaattgaaaacgaaaatgtaatattagtTTTAGGCCAAAACGAGGGAGAAGTTACGCAGAATTCGCAGTATGTGATGCTGGAAGGACAAGAGCTGGAGGTATCTCTTGAAATTCCAAATTcggaacaaaataaaaacgaacaaataaaatttttgaatgaaaccGAAGCATCAAATCAATCTGACGACAATTCAGTAACCAAAAAcggtaaaaaaatgaacattggAAATTTGGCCGCTGGTTCTTTTGTTGTAATGTCTACGGAATCGGAGGAACCTgttagcaaaagaaaattcaatgtaTTTATGATCTCAGAAAAATCAAGATCTGACGGCACCTCCTTTCTCTCTTCTATACCCGTTCTGCTACCCCCTGAGTTAATGTCAACCTTAGCTAAGGAATTGTAA
- Protein Sequence
- MASRRSRLKAVANLPVRRKPAPQLTIEDSKVQSGETIESTLIANEREEDKGGNLENSNHVINEIPAGVTASVAGDTLDNSLSFNSTVDSVQDISVTVKSVANVLNHTENLSVKSNLYKDTTGSFQFGRRIKPSVNLAVLKERPKNPEKEKLILNDSESVGKENHFSSNTDDNFNHFENLIKSTRITETHNNKVYTVENKVRLEDNDRDETSETENEIIENFSKENENTSESQCLNVEENLHKQDANFLQTNVVSSSNSSNQSISENALLFDANEEEENSLRQTNEFLIANNSNSISDSCLKSSHNNTQLQLGSLHGKKNTFLTKPKKVKYIDFSKKVAEAKKEFQKKYEKLIPDRGDLKMIDLIFYNPIGNPMESKCKNVKSNLNLNNQELMSEDNVDDPDPIDKQLDENNDSEILGEDIGKMPVPQVKIGPNGEIILDEKSLVIETTEVKKGREDLKNSVPIYEDKISKCYYHRKTQKTRDWTDSETKRFYKALNTIGTDFSLMLEYFPYRTRLELKNKFKREEKLNRQLVDKALKNPSEFDIHEFEKYLALEKQEEQKKEFETMLLRRKFKCKKPLIKTNRKSSLLAKELLLTDSSVDEAHIGSNLKHSKLSLEENKTKKSNEIDLLCGKYFSLEGEDIQEEFLKLITSANNSSSSDPYIKDGTTECVKVNKIRDALVKIKNFNLTEEKNCENLIIHDDVAIESRVDNTSCNRSDVVDKFYDAVVSLSESLKSNDVNNLKSRRFRKILSKSRQGKVCVSKNGKRKLGRKNKYKEANYPFVNTLDVETYDSKYDSNSSSSESNDNSIVSMKTISDEEFVKLLAANVSNMKESKIKFQITEGCSLEKNVEIILDNVPSTALNEIQNENERTDVECNRRIIEDGRDVEESGEEERNIVLPIGSRSPRRQETSVIVRNPHAIMRLGKEEEVEVPTEHEGVRKLFGIVKKGNFLKNIDNEDELIENENVILVLGQNEGEVTQNSQYVMLEGQELEVSLEIPNSEQNKNEQIKFLNETEASNQSDDNSVTKNGKKMNIGNLAAGSFVVMSTESEEPVSKRKFNVFMISEKSRSDGTSFLSSIPVLLPPELMSTLAKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307965;
- 90% Identity
- iTF_01307965;
- 80% Identity
- iTF_01307965;