Rmar025428.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- -
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010009097.1:31897-34197[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 6.3e+02 1.6 0.1 29 44 136 151 134 153 0.82 2 2 9.7e-15 1.8e-11 44.9 0.0 3 45 159 201 157 202 0.95
Sequence Information
- Coding Sequence
- ATGGACGAAGAGGCTCTTAGGCTGTTGAGTGACGTTGCGTTAATTGATCAAGAACTACAATTTGGACTACTGCAGAACGACGTCGGGGAAATATCACCGAAGAATCTCCCGATTGATTTTGAAAGGAATGTGGAACCTTCGGACTCTTGCCTTCTTGATTCTGTTTCTCCAATTGTCTATAACGAAAGTTGCCAAGAATTGTTAAAGgcaattgaaaataagttGATAGAAACATTGGAAGACAACAGGAAAGAACAACAAATTATAAGCATACCTTATTTCAAAGATCTTGAAGGTTATCCACAACCAAGAAATGAGGATGTAATAGAAAGAATGGGGAATAGAGAATTATTATGCACTGATTTACTAAAAAAGTCTCATGTTTGGACGAACAAAGATAAAGAATATTTGACAAGAAGGGTACCCAGTCAGATAAGGTCGAGATATTATTACTTGACTAGCATTTTAATGCCAGAGTTCACCCAAGAAGAGGATGAATTATTGATAACTttagtcaaaaaatattcgaaagaCTGGCTCAGAATAAGCGAATATTTCGAAGACCGCTCCACGGTGCAATGTCGAACAAGATATAATTACCTAAGGaagttgaataataaaatacctAATACTGAACTTAAGAATATGCTCATTCAGCAGCAGAATTGCTCCAAGAATGACGAAAACATGTTGAAACCTGTCAAAAAAGTTAGGAAAGCAagtagaaaggaaaaaagcgtTTTCACTGTTTATGATGAGATTTTGGACTATCATAAATATTGTTCGGAGAATTTATTCGGACCCAAAATAAGAAACCCTGCTACTAATAAAGAACTGGACGAACTGAGTTATAATCTTAGAGCAGTGATGGCCATGCTATCGGTCAGCTGTAATTTTTCGCGTAAAACGAGCATAATCGAATCCCTTGAAGGTAATTGCAATTTTAGCTTTTGCGacataaaattacttaagaaATTACCTGAAGATGATgataaaagagatttttcgCTAAGGGAGAACTATTCCCTGAACGGCATGCTACTGCCACCCAATTATTGCACGCTTATGGGGCTGTATAGTTTAAGAATGAACCGTTACAGAGTTCGAACACGCACGTGCGAGGTCGAGGGATTGCCATTGACTCTGAACGAGAAGAAATTTGATGTGGAAGACGAAGAAAATGAGCAGAGACCTTTATTTCTGGAGGCAAAATCACTTTTCAAATCCCGAATCCGCTCCCTGTTTTATCTTTCGCATCTCCTGGACCATGTGCCAACGAACGATATGAATTTGGAGCACTATCGTAAAAAGAAGACGAAAAGACCGAAAAAGTTGACAAGGAAATGGTTGAAGATGCATgcgaaatatatgaatttgatGTATCaggaaaagaggaagaaaatgatCGAGAAAGAAGCGATAAATAATGTGGATAAGGTCGATGAGAAGGGAGCAAATGTTAATTTGGCTGACAGGAAAaatggcaaaagaaaaatggaatcgAATGAAAGCAATGCGGAAACGCCAAAGAAGAAAACGCGGCAGAGGGGGCGAACCAAAACTTGa
- Protein Sequence
- MDEEALRLLSDVALIDQELQFGLLQNDVGEISPKNLPIDFERNVEPSDSCLLDSVSPIVYNESCQELLKAIENKLIETLEDNRKEQQIISIPYFKDLEGYPQPRNEDVIERMGNRELLCTDLLKKSHVWTNKDKEYLTRRVPSQIRSRYYYLTSILMPEFTQEEDELLITLVKKYSKDWLRISEYFEDRSTVQCRTRYNYLRKLNNKIPNTELKNMLIQQQNCSKNDENMLKPVKKVRKASRKEKSVFTVYDEILDYHKYCSENLFGPKIRNPATNKELDELSYNLRAVMAMLSVSCNFSRKTSIIESLEGNCNFSFCDIKLLKKLPEDDDKRDFSLRENYSLNGMLLPPNYCTLMGLYSLRMNRYRVRTRTCEVEGLPLTLNEKKFDVEDEENEQRPLFLEAKSLFKSRIRSLFYLSHLLDHVPTNDMNLEHYRKKKTKRPKKLTRKWLKMHAKYMNLMYQEKRKKMIEKEAINNVDKVDEKGANVNLADRKNGKRKMESNESNAETPKKKTRQRGRTKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -