Rmar029275.2
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- DNAJC1
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010011050.1:13785-15379[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7 5.1e+03 -1.3 0.2 4 12 25 33 23 43 0.62 2 3 6.5e-07 0.0012 19.8 0.0 2 40 294 335 293 341 0.88 3 3 6.6e-11 1.2e-07 32.6 0.7 3 45 379 425 377 426 0.91
Sequence Information
- Coding Sequence
- ATGGCTCTCGATTTAATTTCCATCTCAATTATAGTTGTAGTCGTGGCAAACTTACCTTGTTCTGTTAATTGTTGGGATTCGGAAGAATTAGAGCTTTTCGATTTAGTAGAAGAAGTGAATCAGAACTTCTACACCCTTCTAGGGGTTGATCAAGATGCCGATTCTAAAGTAATTCgtaaagcatttaaaaatttatcattaatattgcATCCTGATAAAAATGATGCTCCAGACGCCGATACCAAATTCAGACAACTCGTTGCGGTACACGAAATTTTACGTGATCCATCCAAAAGGCGTAGATACAATGAAGTTTTGGAAAATGGCTTGCCTGACTGGCGACATGCTGTTTATTATTACAGAAGAGTTAGGAAAATGGGACTGGCAGAAATGCTcgtcattttatttatcattgtcACTTTTGGGCAATACATAGTAGCTTGGGCTgcttatttggaaaaaaaatacattgttGAAGAATATGTAACaacacagaaaaaaagattgcttaaaaagcaaaaaaagggaaagctGGAAGGGGAAATTCCTGAAATGACTATTGAAATTCCTAAGCCAAGtctttttaatactttacCTTTCCAAATACCAAAGTTCTTTTGGATTAGCATTACTAGTATTCCTGTTAgtattaagttatttattgatttttgtattgaaagaagaaaaagaaaatatgaaaatgagtCTTCTtctgaagaagaagaagcagaACAAGAAATATGGGTGAAAGGCCctagaagaagaagaaattttactaTTCCTGAAATACAAGAAAACTCCAAACCAAATGGTGGTTGTGTATTAGAGTCAGTGGAAAGTCCTGATTCAGAAAATGAAGAGCAGAAACCCATATCAGGAGGATTATGGACTGATGATGATTTAACTGAGCTAATTAgattagttaataaatatcCTCCTGGAACTGCTAAAAGGTGGGAAAGAGTAGCAGGAGCAATGGGGAGATCTGTTAGTGAAGTAATACATATGgctaaaaaagtaaaagaggGAATGGCTGTTAAAAGTGATGCTAATGATGAAATTATGGAAGAAcctaaaaaagttaaaacaaaagGTGGTAAATTAGCTGCTTTGGAAGAAGtggttCAAGATAAAGAGTGGAATCAAGTTCAGCAAAAGGCACTTGAAGaagcattaattaaatatccaaAACAGTGTGTAGAAAGGTGGGAAAAAATAGCAAAGGCAGTACCAGGAAAGACCAAAGAAGAGTGCATGTTAAGATTCAAGCAATTACATGATATagtcaagaaaaagaaacagtcTGAATTATAA
- Protein Sequence
- MALDLISISIIVVVVANLPCSVNCWDSEELELFDLVEEVNQNFYTLLGVDQDADSKVIRKAFKNLSLILHPDKNDAPDADTKFRQLVAVHEILRDPSKRRRYNEVLENGLPDWRHAVYYYRRVRKMGLAEMLVILFIIVTFGQYIVAWAAYLEKKYIVEEYVTTQKKRLLKKQKKGKLEGEIPEMTIEIPKPSLFNTLPFQIPKFFWISITSIPVSIKLFIDFCIERRKRKYENESSSEEEEAEQEIWVKGPRRRRNFTIPEIQENSKPNGGCVLESVESPDSENEEQKPISGGLWTDDDLTELIRLVNKYPPGTAKRWERVAGAMGRSVSEVIHMAKKVKEGMAVKSDANDEIMEEPKKVKTKGGKLAALEEVVQDKEWNQVQQKALEEALIKYPKQCVERWEKIAKAVPGKTKEECMLRFKQLHDIVKKKKQSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307959;
- 90% Identity
- iTF_01307959;
- 80% Identity
- iTF_01307959;