Basic Information

Gene Symbol
Arid2
Assembly
GCA_028565995.1
Location
JAOWBB010000002.1:937825-952384[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-08 0.00015 23.1 0.0 41 89 27 73 14 73 0.87

Sequence Information

Coding Sequence
ATGAAGGTAGCAATCAATAGAAAGCGGTTTACAGACGCTTATTTAAGGAAGTTTATACGCAAGCGTCCAGAAGGCGTCGATAAACTGCTTGGAGGGAATCACGTTAACAGAACCAATCAATGGGAAGATATACTAGAGGAATTCAGTATACCAAAGGGTTGTGTGAATGGAGGAAATGCCCTGAAACAGATTTATCTTAGATATTTAGATCGATATGAAAAAGTTCATTATTTGGGCGAGTCCGGAGATCGCCACGAGTTGGACGAGGAGGATATCGAAAGCCGGCACAGAAGATGGAGCACACGGTCCATGCATACGGTACCGCTTACATACAACTATCATCAGCATGTTGTTGTGGataatttaagaaagtttAATGGCCTGTCATCTGACATATATAAACCTTCCGATTATGACAGGCTGGCTCTGTCATTGGTTTCACCTCTTCCAAATGAGCAAGATTTTGCAATCAATGTATGCACTCTTCTATCAAACGAGggaaaatatactttaaaactAGATAAATGCCCTCGCATCATCGATTATCTATTGGCTCATGCCGGAATATATAATcatgCAAATCTCAGAGTTTTATTCGAAGAAATTTACGGCCACGTCCGCGGTTATTCACTAAGTACATTTTGGAGTGATGTATTAGAATCAGAGGATTATTTAGATCTCACagacgaaaataaattcgtcAAGAAACCACCTAGGAAATTAAAGGTCATAAAAGTCGTATCTAAATCCCCAGAATATTCAGGTAACGATTACAACCAAGATATTTTGCCAAATTTGGAGCGGGAAAGTAGTGCTTTGGGATCTAAGCTATCAGAAGCAAGGACAGTATCAGAGATTGATTTATCCCCGTGTAAAAACAGGGAGAATAATACTATAGATATTCGAATAAATGAATCTAGTGAGAACATAAATAACAGTATTGAAGACTCTTGTTCAAAGATCCAAAATTCGTATGGGTGtagtattaatgaaaatgaaaatatgggtgctgataaaagagaaaaaattttagtcgaCCTaacacatgaaaatattaataaaaaggaatttgaacAGGATAAAAACGATTTATGCCTAAAAGTACAAGAAAGGGAATGCACAAAAAAAGATATAGTCAGTGTAATTAATGTGGAAGAcgttattgataaattaaaatataaagtaaatagtTCAGAAATCAGTGATAACAGTGAAGTGCacgattataaaataagtcaAAATAATTACTCGCCTTACGTAAGGGGTTTATCTTTGGCCGAGAATAATGAGAgggatttttctgaaaatcttcCGAATCATCTTCAGCAACATAGTAATAGCGAATCAAAAGCAGAAAcccaatttataaataaaggttttgaattgaaaattgatacAGGAGCAGAAAATAAGGAGGGgcacttaaaaagaaatgatttgaaatcTGGCTTTGCCTTTGAAGCTGGTATCGTTCCGTTGACTCATCGTGAAATTCCACCTAGagttgaaaataaaggaaaatcttcCACTAAAATTACAGAAGAAAAAACTGGATCCCAAgacgaaaagaaattaagagaCAAACAAGATTCAAGAGtggatgaagaaaaattacaaaacgaAGATGAATTGGCAAGGATTACGGCTCTTGAGGAAAgcaaaaaactggaaaaagaaataaaggagGCAGAATATTACGAAGCAATGCTAAAAGAGGAATtgcgaaaaaagaaacctttttctttcgaaGAAGCACCAGCAAAAAAACGCCGAAAGAATGAGACTTTCTTGAAAATAGAACCTGaagataaagaattatttgctCTTGGAAGGGACTATGGCACGCGCGATTATATTGGGCAGAGGGTACTACAGgtgGCCCATATTCtgagaaatttaactttttgcgAAGAATCCATGCAAGTTATGGCGAAAAACACAACTTTCATTCGATTTCTGCTACTTTGCGTGAATTCGAAATGGTCCTCTCTGCACCAGCTTGGGCTTGATATGTTGGGAAATGTTTCGCCGGAGCTAGTTATTGAAGATCCATCAGTAGATAGAATTTATCAAGCTTTTTTCTGCACCATAAATCGCGGTATTAGTCATCCGAAcaggttttttattatttcttgtcTCGAAATTCTGAATAAGATCTGTCAGagagatgaaaatgaagatgTGATATCTAGAAATTTGGATCAGTGTatatacgATCAAGTATGCCGACTTCTTAGCCTGCATGATATAATGATCTTATTATATACCTTAGAATGTCTATATTCAATGTCATCCATGGGAGAAAAAGCTTGCACATATATCTGCAGATCAAAGGGTGCTGTAGAAATGCTGCTCGCTCTTGTCACTGTGgagGCCCAGAGTTACGGTCCCAAGGCTTGCATATTGATGAGGGTTATCGAAACTGTGTCTGGTACGGCTTCTTCAAATCCACAACCAGCGCAACCTCCTCCTCCAGCTAGTCCTGGTCCTGGACCTCCTTTAACTGGAGGATCAGTGACATCCTCGGTTCAAGCCATGCCTTCTATGGTAACAACATCAACCATGACAGTACAACCGCCCTCCCTGCCAAAGGTCATCACACAGAATATAATAAGGACTACTTCTCCAAaaacTGTGGTTGGTGTCATGCCAATGGCTGCAGTTGCCACTCCCGTTCAGGTTCCCGCTAAGGTCTGCACTCCGTTAGTGCAAACTATGCCAACGGTTCAACAACAACACGCTCATCAACAAACAGTCCAGgAAAATGAGCAATTTGCCTTGGCTTGGATAAGGGCCAATTTTGAATTGAGTGTTGGGGGAAAAGTGGAGCAGCAAGATCTGTATAAAAGATATTTGGATTCTTGTGCTAAAATGGGAAGAAAAGGTGTTATTGCAGCTTTGCACTTTCCACGATTTGTAAgATCTGTATTTGGTGGCACAGTTGGACCAAAATCTCAACCTATTCCCGCTAATGAAGTGAAACCCGGAGGTCCGGTGTCTCAATCTTTCTACGAAGGAATCAAGGTGCGCGACGTCCCTTTGACGATTAACATCAAACTTGTCCCGGTGACTGAAGTCCCACGTCCGATGGTGAAAAAACGTCCCCAAACAGCTACTCCTAAATCAAAAGTTAGGAGGAAGAAAGCAGGGTCCCCTACTTCTCCCATTCTTAAGGCACAACTTATATCTCCTAATAAATCCAATCCTTCCTCCTCAATGCCTTCGACTTCTATTTCGGAAGGCAAAGTACAGGTATCCACTCAGACTCATCTGGGTCAAGCTCTCTTGGGTCAAAACACTTCGCCCCCAAGTACGCCCCCACCGTTGGACAACTCCACTCTGATCAAAAGTCTTCTGGCGTCGAAAGTAAGCGAAATCTGCATGAACTCGTCCTTTGGCATGCTTTCTGATAACTCACAGgtgACTCAgaggcagcagcagcaacaaaAAATACTACAACAGCAGCTACAGGCAAAACCAGATTCTcccaataaaaacaaattgacaAGGATCAACGGTGTTATTCAAGAACCTTTGGGATCATCGCCGGAAAATCATTTGGTACCAGCGGgtataaaaggtaaaaaggaACCTCCTCAACCTCCGCCTGCAGTAGCTTCATCCAACACTGGAAATACGTTAAGACCAAAGACTCCAAAGTTAGATACCGAAGATTCCGATTCGATGGCATCGACAAGTAGAGATTGCACTGTCTTAGGTGGAGGAAACACATCTTCTGCAGATGACAACGACAATTCTCTGACCAGCTTCGAGGGAATATTTAACGGACTTCAAGAATCACTAGACATAGATGCTGCCGTCACGGACGAGAATTCGAAACAGTTTCAGAATAAATTGAATAGTGACGacaaaaatcttcaaaagaaatctgtaaatgaagaaaactgTATAAAATCCTCTGTGATTAAATTAGTATCGGAGGAAAGCAACGAAATGCAAACAGAAAAGAAAGTAGTGACCGAAGAAAGCCGTGTTACGCAGACACAGAGCAAATCTCTGATGTTGGCAGATCTTCTTGACAAGAAAGAAAGTCCCGCGCTAAATGGAGTGCTCGGAAAGGACCTGAGGATCGGTGAAAAAGGACTCGAATTGGTCGAGAAAGCGATCCTTAAGGAAAcgcatttaaataacaaagatATTAGTgtgaattgtaaaaaagaaagtgtGGTGAGTGTAAACGGAGATTCGAGGACAGGAGAAGATTGCGTGACTGTGATAACAAATGAGTCGTTGCAGTGCGGAAATAAGCGTACTCATGAAACGACAGCCGAAGATGTTGAAGTGAAAAGACTTAAAACGGAAGAAGATGCGGATTTAAATGAAGgggaaaaaaataatactccCAAAGATTCAAAGAAATCCGaagaagaaacgaaaaaagttgaaaaagaagatttaaatGGCGATGAAGAAGTGCGGGCTTCATCTACAGCAGCCAATCTATTTGCGGCATTAGCAGCCGAAGCTTTGGAAGACGAAACTGACCTGGAAGTTCCTAGCGATCCCGATCCTCAGCCGCAAACTGTTGTGGTTCCAACTGGACAGataagGCCGGTTTTTCTGGGAGATTCATCACCTCTTATTGTCACCGCTGCCGGAACTAGACAAATTATAATGACTCCTGGACAATTGACCCAGCAAGGTCAGGTACTTATTTCAACCGGAAATCAATCTCTACCTGTTATTGTTCAAAACCAGAGAATAGTTCAGGGTAATTCTGGCCAGATGTTGGTCACATCCCAACCTCAACAGTTTATCATGTCCGGTAATTCTCAAAGTCAGATGTTAATAGCACAGCCTCAGACTGCACTCGTTCAGGGACAGCCGCAAACAGTTCTTGTAGCGCAGGCAACACCGCAGCAACCCGgaacaaaaacaattattattttacaacccCAATCACAAAGTAACGCCAGTTCGCAGCAGCAACAGCAACAACAACAGAAGATGGTAGTAACTTCAcaagGATCTCAAATGGTCGTAACTTCAGTATCAAGAACTGTCGTCCAGTCTCAGTCAACTCCTCCATCTTCTCCGGCACCACCTCTCCTGGTTGGTGCAACTAACAGCATTCAAAGAGATAACTTAACAACTGATGTTGTTCTTAACTCAGGAATTCAAAACAACCCACCTGTATCTACGTTGCACCAAAATGGTTCCCAGATTCAAATAATCAGCTCGGGTGTTCAAAACAATGCGCCGATTCTAAATCAATCCGCGGACAAAACAAAATTGGTCAATAGTAACACAAAATCTGTACCTGGTGCCAAGAATCCTGATGGCAATGTTTTTCTTTGTGAATGGAGAGGATGCATGAGgaGTTTTAAAACATCGAACGAAGTGTACATGCATGTTTGTTCCACACATTGCCCGAGTAATCCAGAACAGGAAACGCAGTGTCTCTGGGAAAGATGTGATagtatgaaaagaaaaagattttcgcttATGACACATTTATATGACCGTCATTGCAACGCCGAGGTTTTAAATATGATGGCCGCAAGAAGGAAGCAGCTATCTTCCCAAGGACGAACTGAAATCCCGGCACCGGCAAGTCATCCTCCACATCCCGGTTACGCTCCTAATGCTGCATTTCATGCAATCAAGAGACACGCCCTGGAATTCGTGAATCCTAAGGAATTAATGGATGATAACGAAGGTCCAGTTACTAAAAGTATTCGATTGACGGCATCGCTTATTCTTAGGAATTTGGTTATTTATTCATCCATAGGCAGAAGattcttAAAGGGCTACGAACCGCATTTGGCCAGCATAGCCCTGAGCAATGTGGAATCTTCGCGAACGATAGCACAAGTATTGGCCGATTTAAACGATACTTCCTCTCGATGA
Protein Sequence
MKVAINRKRFTDAYLRKFIRKRPEGVDKLLGGNHVNRTNQWEDILEEFSIPKGCVNGGNALKQIYLRYLDRYEKVHYLGESGDRHELDEEDIESRHRRWSTRSMHTVPLTYNYHQHVVVDNLRKFNGLSSDIYKPSDYDRLALSLVSPLPNEQDFAINVCTLLSNEGKYTLKLDKCPRIIDYLLAHAGIYNHANLRVLFEEIYGHVRGYSLSTFWSDVLESEDYLDLTDENKFVKKPPRKLKVIKVVSKSPEYSGNDYNQDILPNLERESSALGSKLSEARTVSEIDLSPCKNRENNTIDIRINESSENINNSIEDSCSKIQNSYGCSINENENMGADKREKILVDLTHENINKKEFEQDKNDLCLKVQERECTKKDIVSVINVEDVIDKLKYKVNSSEISDNSEVHDYKISQNNYSPYVRGLSLAENNERDFSENLPNHLQQHSNSESKAETQFINKGFELKIDTGAENKEGHLKRNDLKSGFAFEAGIVPLTHREIPPRVENKGKSSTKITEEKTGSQDEKKLRDKQDSRVDEEKLQNEDELARITALEESKKLEKEIKEAEYYEAMLKEELRKKKPFSFEEAPAKKRRKNETFLKIEPEDKELFALGRDYGTRDYIGQRVLQVAHILRNLTFCEESMQVMAKNTTFIRFLLLCVNSKWSSLHQLGLDMLGNVSPELVIEDPSVDRIYQAFFCTINRGISHPNRFFIISCLEILNKICQRDENEDVISRNLDQCIYDQVCRLLSLHDIMILLYTLECLYSMSSMGEKACTYICRSKGAVEMLLALVTVEAQSYGPKACILMRVIETVSGTASSNPQPAQPPPPASPGPGPPLTGGSVTSSVQAMPSMVTTSTMTVQPPSLPKVITQNIIRTTSPKTVVGVMPMAAVATPVQVPAKVCTPLVQTMPTVQQQHAHQQTVQENEQFALAWIRANFELSVGGKVEQQDLYKRYLDSCAKMGRKGVIAALHFPRFVRSVFGGTVGPKSQPIPANEVKPGGPVSQSFYEGIKVRDVPLTINIKLVPVTEVPRPMVKKRPQTATPKSKVRRKKAGSPTSPILKAQLISPNKSNPSSSMPSTSISEGKVQVSTQTHLGQALLGQNTSPPSTPPPLDNSTLIKSLLASKVSEICMNSSFGMLSDNSQVTQRQQQQQKILQQQLQAKPDSPNKNKLTRINGVIQEPLGSSPENHLVPAGIKGKKEPPQPPPAVASSNTGNTLRPKTPKLDTEDSDSMASTSRDCTVLGGGNTSSADDNDNSLTSFEGIFNGLQESLDIDAAVTDENSKQFQNKLNSDDKNLQKKSVNEENCIKSSVIKLVSEESNEMQTEKKVVTEESRVTQTQSKSLMLADLLDKKESPALNGVLGKDLRIGEKGLELVEKAILKETHLNNKDISVNCKKESVVSVNGDSRTGEDCVTVITNESLQCGNKRTHETTAEDVEVKRLKTEEDADLNEGEKNNTPKDSKKSEEETKKVEKEDLNGDEEVRASSTAANLFAALAAEALEDETDLEVPSDPDPQPQTVVVPTGQIRPVFLGDSSPLIVTAAGTRQIIMTPGQLTQQGQVLISTGNQSLPVIVQNQRIVQGNSGQMLVTSQPQQFIMSGNSQSQMLIAQPQTALVQGQPQTVLVAQATPQQPGTKTIIILQPQSQSNASSQQQQQQQQKMVVTSQGSQMVVTSVSRTVVQSQSTPPSSPAPPLLVGATNSIQRDNLTTDVVLNSGIQNNPPVSTLHQNGSQIQIISSGVQNNAPILNQSADKTKLVNSNTKSVPGAKNPDGNVFLCEWRGCMRSFKTSNEVYMHVCSTHCPSNPEQETQCLWERCDSMKRKRFSLMTHLYDRHCNAEVLNMMAARRKQLSSQGRTEIPAPASHPPHPGYAPNAAFHAIKRHALEFVNPKELMDDNEGPVTKSIRLTASLILRNLVIYSSIGRRFLKGYEPHLASIALSNVESSRTIAQVLADLNDTSSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01307820;
90% Identity
iTF_01307820;
80% Identity
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