Rmar022403.3
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- ATF2
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010007790.1:67812-70165[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 1.8e+03 -0.0 0.5 36 52 291 307 281 314 0.62 2 2 4.2e-11 6.3e-08 33.5 8.5 7 65 311 369 305 369 0.93
Sequence Information
- Coding Sequence
- ATGAAAGACTCGCCTGCTTTAATGATCGAAAAGCCATTCTCTTGTGATGTTGACGGGTGCTTAATGAAATTCACGAATGAAGATCATCTAATGGTGCATAAAAAAAGACATGATATGGTTCTTAATCTTGGCTTAGGACCTAAAGCTAATTCATTTTCGGATCAAACACCAACACCAACAAGATTTATTAGGAATTGTGAAGAAGTTGGACTTTTTCAAGACCTTCAAAATGTTAATCCATTTGAGGAAACATTTAGGAAGGCAGTTGAAGCAGTAAAAATGGGTCAAACACCTCTATTGgaaaaagaaattcagtcTAATTCAGCAGATGATACACTTCATACACCTAATGTATTTCCACATATAACAGATCTACCTTGTATCCATCACAATGAATATTCAAACATTCAAGAAGATAGAGAAATTCTTGAACACTCATCAAAAaaggatattgaaaaaaatgtaaattgtaatGAGAAGCAAACATCTAAACATATTGGAGAATTTCAAAAGTTGGTACTTGGAAACATTagtcataaaaaaagaaaatgtgaaattctgGAGAAAGTATCTAATAGTAACTGCagtaaattaatacattttgaagACAATGGAAATACTCAGTGTgagaaatataatgtaaagaaTGATACAATTGGATTAAATCAGGTTCATTCAgctttaaaagagaaaattagaaataatatctttaataaGCAGCTGCCTATAATTTTGGAACTCAAAGTACCAATACCTAAATCTCCTTCTCCTTCAGGatatcaaaaatgtttaaaaaataagttttctacTTTCtccaaaaattcattaaaatttgcatcaaaactggaaaagcaagaatctaatatttttgatcttagtaagaagaagaagaagctaaaaagcaaaaattgtcttcaaaaagaaagaatagaaattttagaaagaaacagggCTGCTGCTACAAGAtgcagagaaaagaaaaaaatttatttgttatatttagaGAAATTGACAAGAGACTTAACAGatgcaaataaaaagttacaaTTTGATAAtacaaatctgaaaaaaaaaatttcatctcttgaggaagaattattaaagcataaaaattgcAGTCTAACAAAGCCTCAAGAAGAAAAAGCTCTGTCATTTACTAATGAGCTTACTGAAGGcgcaaatgaagaaaaactggataaatcacagaaattattaattaaatattgtggAACTATCAATGAATCCAAAAATGGTATAAATGAAAGTGATGCAGTGAAGTACAACTATGCACCTAAATCTGATAATCTATTATATAAAGAGCAGGAATCTATGAATTtaagtaataacaataataacaataatagcAACAACAAAGACACtattttaattagtaaaaGTGGAGCACATTCAGCCAAAAGTTTATGTCAATTAGAGaacttcagaaaaatttattcagatcACTCATATTTTGACTATTCAAACATAGTTGATTTAAAAAGGTGCATGAACTCAGATATATCAAGTTTAAGatcaaattctcttttaaccagtgatgcaaaatataaattttcaaaggataAATTGGATAAATTAGCAACAGAAATAAGAATGAATTCAAATGATTTGAATACGGAAAGATTAGTATTCAATTCACcacctttaattttattaaaaccttttAACAAAAGAAGGTCTAAGCATATGGATaaggcataa
- Protein Sequence
- MKDSPALMIEKPFSCDVDGCLMKFTNEDHLMVHKKRHDMVLNLGLGPKANSFSDQTPTPTRFIRNCEEVGLFQDLQNVNPFEETFRKAVEAVKMGQTPLLEKEIQSNSADDTLHTPNVFPHITDLPCIHHNEYSNIQEDREILEHSSKKDIEKNVNCNEKQTSKHIGEFQKLVLGNISHKKRKCEILEKVSNSNCSKLIHFEDNGNTQCEKYNVKNDTIGLNQVHSALKEKIRNNIFNKQLPIILELKVPIPKSPSPSGYQKCLKNKFSTFSKNSLKFASKLEKQESNIFDLSKKKKKLKSKNCLQKERIEILERNRAAATRCREKKKIYLLYLEKLTRDLTDANKKLQFDNTNLKKKISSLEEELLKHKNCSLTKPQEEKALSFTNELTEGANEEKLDKSQKLLIKYCGTINESKNGINESDAVKYNYAPKSDNLLYKEQESMNLSNNNNNNNSNNKDTILISKSGAHSAKSLCQLENFRKIYSDHSYFDYSNIVDLKRCMNSDISSLRSNSLLTSDAKYKFSKDKLDKLATEIRMNSNDLNTERLVFNSPPLILLKPFNKRRSKHMDKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307793;
- 90% Identity
- iTF_01307793;
- 80% Identity
- iTF_01307793;