Rmar012921.1
Basic Information
- Insect
- Ricinus marginatus
- Gene Symbol
- Xbp1
- Assembly
- GCA_028565995.1
- Location
- JAOWBB010003228.1:33309-34319[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-19 3.5e-16 59.9 11.8 2 64 41 103 40 106 0.95 2 3 0.23 3.5e+02 2.3 0.1 43 62 118 137 116 139 0.91 3 3 5.4 8e+03 -2.1 0.1 28 42 221 235 213 239 0.61
Sequence Information
- Coding Sequence
- ATGACATTTGAAGAACTGTTCGGGACtataagtgaaaatataattacagtGGACGACAACTATTCACATATAGAAATAACGAGTAGCAGGAAAAGAATGAGGACTCATCAGCTTTCTTGGGAagagaaaattcaaagaaaaaaattgagAAACAGAATAGCTGCTCAAACATCAAGAGACAGGAAAAAAGCTCGTATGGATCATTTAGAAGGGGCAGTTAAAGAgttgcaaaaggaaaatttagaattgcattctaaaattaaagaacttCAAGAGCAAAATGAATCTCTCCTGAATACTAATGCAGAATTACATAAGGTTTTGTCAATAAGAGATTCTTCATGTACATGTCAGTTACAGAAAGAAATAAGCAACACaacagaaaaaacaaatggTCTAAATCAGAATTGTGTCAATGCTGACCATTTCTTAGAAGTACCTGCAGAGTCTTCTACTTACCCTCAGCAGAAGGGAAGGAAAGCTTTGGCACAGGATCTGATGGATATAACCTTCTGGACTGCATGGAAAATCTTCATTCTTTGTCTATTAACTCAGAAATGCTTGGAGATATCAAAAACAACTCATTCCTTGATGACTTGGAGAGATTGGCTGAAACATTGCTCCAAGAAGTTGAACAGTATGGAAATGCAGGAAACATTACATCTGATGGAAAAGAGatttcagaACCTTATAAGAAAGAATGCAGTTCTGATAAAATGGTGGGGAAAACACCAGAAGTGTTGGAATCCTGTAGAGATGATGAAATAA
- Protein Sequence
- MTFEELFGTISENIITVDDNYSHIEITSSRKRMRTHQLSWEEKIQRKKLRNRIAAQTSRDRKKARMDHLEGAVKELQKENLELHSKIKELQEQNESLLNTNAELHKVLSIRDSSCTCQLQKEISNTTEKTNGLNQNCVNADHFLEVPAESSTYPQQKGRKALAQDLMDITFWTAWKIFILCLLTQKCLEISKTTHSLMTWRDWLKHCSKKLNSMEMQETLHLMEKRFQNLIRKNAVLIKWWGKHQKCWNPVEMMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307776;
- 90% Identity
- iTF_01307776;
- 80% Identity
- iTF_01307776;