Rarc021993.1
Basic Information
- Insect
- Ricinus arcuatus
- Gene Symbol
- gata4
- Assembly
- GCA_027475445.1
- Location
- JAOXJT010001619.1:15195-22385[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1e-18 2.2e-14 53.9 4.1 1 34 53 85 53 87 0.97 2 3 1.8e-18 9.7e-15 55.1 2.8 1 35 107 140 107 141 0.98 3 3 2.7 1.4e+04 -3.0 0.1 2 9 224 231 224 232 0.71
Sequence Information
- Coding Sequence
- ATGTCTTTAGCCCTTAGGGAGGGAAACCCGCCCCGCTTTTGTGATCTCTGCTTCCGTCCCGAAAGGCTTGAAAGAGGAAAATCCCGTCCTTTCGCGAAAAATCTTCGACCCATCGAAAGACGCCATTACGAAATCGATTATTCGGAGGGCCGCGAATGTGTCAACTGTGGCACTGTGTCCACCCCTTTGTGGCGAAGAGACGGAACGGGTCACTATCTGTGCAATGCTTGCGGCCTCTACCACAAAATGAACGGGATGAACAGGCCGCTTGTGAAACAGCCAAAGCGGCTGACGGCGAACAAGAGGTTAGGGCTTCAATGTTCAAACTGCAGAACGGTCACCACCTCGCTGTGGAGGCGGAATGCTCTCGGAGAACCCGTGTGCAACGCGTGTGGTCTCTACTTCAAATTACACGGAGTTAACCGTCCATTAGCCATGAAAAAAGACAGTATACAGACTAGGAAGAGAAAGCCGAAAGGATCGTCGAAAGGTGAAGGCGTGAACAACGTTGCTAGTCCCATCTCCAATTCTTCCTCAATATCCGTCGGCCCAGCACCCAAGAGATCCAAACTCGATCAAACTGATTCCTATGGAGACGGCAGAAACAGCCATCACCAGCAGATCACAACTCTCGTATCGAATTCCCTGTCAGCGTATCCATCCCTCTACTCTCAGTGCGGAAGCCACGAATCATCGTCGAAAATTTACTGCACGCCGTATCACACTCAGATCTCACACGAGGCTTACTACGACTTTGCTCAAGGTTCACCCGTCGACAACGAACCGTTGGCGACTAAACTGGAAGAACCGTCATCCCACGCCAGCAGTTCGCCTTCCTCGCCGAAAGTGGTGGAAATGGAGAGACCGAGGGCGTCCCGCTAA
- Protein Sequence
- MSLALREGNPPRFCDLCFRPERLERGKSRPFAKNLRPIERRHYEIDYSEGRECVNCGTVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPKRLTANKRLGLQCSNCRTVTTSLWRRNALGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGSSKGEGVNNVASPISNSSSISVGPAPKRSKLDQTDSYGDGRNSHHQQITTLVSNSLSAYPSLYSQCGSHESSSKIYCTPYHTQISHEAYYDFAQGSPVDNEPLATKLEEPSSHASSSPSSPKVVEMERPRASR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -