Rarc030244.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ricinus arcuatus
Gene Symbol
ct
Assembly
GCA_027475445.1
Location
JAOXJT010000011.1:2309512-2314808[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-32 3.5e-28 98.6 0.1 3 77 517 592 515 594 0.96
2 2 1.3e-30 2.7e-26 92.6 0.0 3 75 746 819 744 823 0.95

Sequence Information

Coding Sequence
ATGGCAGCGCGCGCGGACTCGATCCGAGAAGCGCGCTCGAGCGTTATTCGCTCGTATGCAGCCTCCGTCGTTCATGCTCGCCGAACGGGAGCTGGGCGCTCGCGGACCCGGGGAGCAAAAAAATGCGAAACTCGCGACATCCTCCTGCCCGCGGGGCACTTCGTCGCGTTCCGCGGAGAACCCGGTCCAGTTTCCGCGCGGTCGCAATTCGCGGCTGGGGGAGGGGAAGAAAGAATTTCCATGATATGCATGACAGTTTTCATCCCTTGTGGCACCTTACGTAATGTGTCTCCTCGTGCGGCGGGATTAGAGGTCTCGCCGACGCGTCACCGGCTGGACCGGGGAAGGGAGGGGAGGGCGGGGCTCCTGATCGCTTCAAAATGGGTTTCTCGAAATTTTGCCGCTTTGCCGCCGCCGCGCCTTTTCGCGCGTAAAACGGATTTTTCGTCGGAGCTCCATCCGGTGGAAATAGGAAGGTTCCTTCGTCGTGAATTAAACAAAACGGCAGCCGGAAAGGAAGGAAGCTTGCCCCCGTTCGGAAGGGAAGTTGACAGCCAGAATCTGACTGATGAGAGAATAGCACACATTCTGTCGGAGGCATCCCAAATGATGGGGAAAAACTCGTCGACGCCTTCCCATCACGAAGATCAAAACAGTCACGAGGAAGATTCTAAATCCCCGATGAACTGCCCCTCTCCGATGTCGGCGAAGGAAAGCAGTTTGTCGAGGAGATTGAAGAAGTACGAAAACGACGATATCCCACAGGAAAAGGTCGTCAGGATATATCAGGAAGAATTGGCCAAACTAATTGGAAGAGGTCCAGGAGGACCTCATCCATTTCCGAGCCTGTTGTTTCCACATTTCTTCGGGGGACCTCCAGGTTCCGTGGACAGATCTCAAGAGGACATGAGAATGGCGTTAGATGCATATCACAGAGAATTAGCAAAACTCAACACGTGTCCCAGTCCGGGACTCCCCGGTTTGCTGGCTCTTCAGCAGCAAGCATTGCATCAGAACCCTGCCCAACAGCAAAACGGTGGTGCCCAGGATTTATCGTTACCAAAGGAGAGGAAGTCTGACACTCCAGGACCTCCGAGTACGCCAGGATCTACCGCAGAACGTCCCGGAACCGCGCAGAGTCTCAAATTAGTGAATGGAGTAGCCGAATCGACTGAAAACATGGAAAAAGACAGGGAGCGCGACATGCTGCTGAAGAAGGAAGCCGCGATGATGGACCCGGCCGTGGCAGAGGCAATTCGACATGCGGGATCTGCATTTTCGTTAGTGCGGCCAAAGACTGAACAAGAATGGCCACAACCATCAACTGGCTCCACTGCATCGTCTCCACTTTCAAATTCGATCCTTCCTCCGGTACTCAATCCTTCCGACGATCTTGTCACCTCATCTGCTGCAAGTCCACTCCAGAGGATGGCTTCAATCACGAATAGTCTAATTTCACAGCCGACGGTTCAGTCTCACCACACCACTAACCAGAGGCCGTTGAAAGCTGTCTTACCACCCATTACCCAGCAACAGTTTGACATGTTTAACAACCTGAACACTGAAGAAATAGTGAAAAGGGTGAAAGAACAACTGAGTCAGTATTCTATTAGTCAGCGTTTGTTTGGAGAGTCAGTGTTAGGATTGTCCCAAGGCTCGGTCTCTGATCTCTTGGCGAGACCGAAACCGTGGCACATGTTAACCCAGAAAGGAAGAGAGCCATTCATCAGAATGAAAATGTTCTTAGAGGACGAGCAAGCTGTACATAAATTGGTGGCATCACAATACAAGATAGCACCCGAAAAACTTATGCGAACGGGAGGCTATGGAGGAGCGACGATAAATCCGCCTCCTCTGCCGCCGAAACATTCTATTCCACCTACATCAAAGCACAATGAACAACTCAGCAATATGGCGGCAAATTTATTGCAAGCCCAGCAACAGCATCAGCTAGAACAACGCGATAGGGAGCAGCGAGAGAGAGAGCGAAAAAATATCGAGCGAGAAAGGGAAATAATGAGGGAAACGATTCTGCCGCCATCCCTGAATATCATACCGCCAACCAGCAACAACATGTTAGGTTCTCCTCCAACTCTAAGTGGTCTTATGGTAGGAAGCGATCTCAAAAAAGGACTCACCACTGGTTCCATGCCTCCCCAGCCTCATCAGCTTACCAATATGCGAGCTTTACATCAACATATCTCACCTAGCGTGTACGAAATGGCAGCATTGACGCAAGATTTAGACACTCAGATAATCACCACAAAAATTAAAGAGGCCCTGCTTGCCAATAACATAGGTCAAAAGATATTCGGCGAGGCAGTTTTGGGGCTGTCACAAGGTTCCGTTAGCGAACTGCTGTCCAAACCGAAACCGTGGCACATGCTGAGCATAAAAGGCCGCGAACCTTTCATAAGAATGCAGCTGTGGCTGTCCGACGCCCACAACATCGACAGGTTGCAAGCTTTAAAAAATGAAAGACGAGAATTAAATAAGCGGCGGCGCAGCTCCGGCCACGGAGGAGACAATTCCAGCGACACGAGCAGCAACGACACTTCCGAATTTTACCATTCGGCCAGTCCGGGCCCCGGTCCGCCATCGGCGAAAAAGCAAAGGGTTCTCTTCAGTGAAGAGCAAAAGGAAGCTTTACGATTGGCTTTTGCTCTAGATCCATATCCAAACGTAGCAACAATTGAATTTTTAGCAAATGAATTAGGATTGTCTTCTCGGACAATTACAAATTGGTTCCATAATCATCGGATGAGGCTAAAGCAGCAGGTCCCGCATCCTCAGGAGCCGAATCCGAACGTGCAGCGGGATCCCCAGCAACCTTTTGATCCCGTGCAATTTAGGGTTCTTTTAAACCAAAGACTTTTAGAAGTACAAAAGGAAAGGCTTGGGCTTGGTAGCGTACCACTTCCGTATCCACCTTATTTCGCCAATAATAATTTAGCCACTTTAATAACCAACGTCGCGAAAGAACAATTCGGTGGATTAGATTTAAGTATGAGCGGGTTGAAGCGCGAGCCTTTCGACGACGAGGATGTCGGGAGTGAATTAGGCAGTGAGGACTCAAATCTTTCGTCGGCCAGTTTAAGGGATGTGAAGAAGGAAGAGGGAGACGAGTTGGAAGAGGAGAGAACCGCCACGTCAGCGGGACAGAACAGAAGCTCCAGGAGGAAACCCGCGGCTCCGCAGTGGGTCAACCCGGAATGGCAAGAAGAGAAGAAAAGCTCGGAGAACGAAGTCATCATAAACGGGGTCTGCGTCATGCAGACGGATGAATTTTCGCGGGAAAAGGAAGAGGAAACGATTCGGATCGAACCAACGGCCGTGTTAGATCGTTACGAACATTCGGACGACAGTTCCGACGAGCACAACAACGAGAGGGAGCCCGACCGGAATCCAGAAAACACGGAGAGCGACATGGATAAAAGCAAAGAAACCAAATCAAATAACGAAGGAAATAACTGGGAGTTTTAA
Protein Sequence
MAARADSIREARSSVIRSYAASVVHARRTGAGRSRTRGAKKCETRDILLPAGHFVAFRGEPGPVSARSQFAAGGGEERISMICMTVFIPCGTLRNVSPRAAGLEVSPTRHRLDRGREGRAGLLIASKWVSRNFAALPPPRLFARKTDFSSELHPVEIGRFLRRELNKTAAGKEGSLPPFGREVDSQNLTDERIAHILSEASQMMGKNSSTPSHHEDQNSHEEDSKSPMNCPSPMSAKESSLSRRLKKYENDDIPQEKVVRIYQEELAKLIGRGPGGPHPFPSLLFPHFFGGPPGSVDRSQEDMRMALDAYHRELAKLNTCPSPGLPGLLALQQQALHQNPAQQQNGGAQDLSLPKERKSDTPGPPSTPGSTAERPGTAQSLKLVNGVAESTENMEKDRERDMLLKKEAAMMDPAVAEAIRHAGSAFSLVRPKTEQEWPQPSTGSTASSPLSNSILPPVLNPSDDLVTSSAASPLQRMASITNSLISQPTVQSHHTTNQRPLKAVLPPITQQQFDMFNNLNTEEIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGATINPPPLPPKHSIPPTSKHNEQLSNMAANLLQAQQQHQLEQRDREQRERERKNIEREREIMRETILPPSLNIIPPTSNNMLGSPPTLSGLMVGSDLKKGLTTGSMPPQPHQLTNMRALHQHISPSVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERRELNKRRRSSGHGGDNSSDTSSNDTSEFYHSASPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLSSRTITNWFHNHRMRLKQQVPHPQEPNPNVQRDPQQPFDPVQFRVLLNQRLLEVQKERLGLGSVPLPYPPYFANNNLATLITNVAKEQFGGLDLSMSGLKREPFDDEDVGSELGSEDSNLSSASLRDVKKEEGDELEEERTATSAGQNRSSRRKPAAPQWVNPEWQEEKKSSENEVIINGVCVMQTDEFSREKEEETIRIEPTAVLDRYEHSDDSSDEHNNEREPDRNPENTESDMDKSKETKSNNEGNNWEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01164797;
90% Identity
iTF_01307909; iTF_01308484; iTF_01308578;
80% Identity
iTF_01307909;