Rarc038609.1
Basic Information
- Insect
- Ricinus arcuatus
- Gene Symbol
- kn
- Assembly
- GCA_027475445.1
- Location
- JAOXJT010000012.1:3036925-3039272[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-34 1.2e-29 104.3 0.4 137 183 1 47 1 73 0.90 2 2 0.48 6.8e+03 -3.8 0.1 476 498 88 109 83 132 0.59
Sequence Information
- Coding Sequence
- ATGTACGAGGGACAAGATAAAAATCCTGAAATGTGCAGAGTTTTGCTGACGCATGAAGTCATGTGCAGCCGGTGTTGTGATAAAAAAAGCTGTGGCAACAGAAACGAAACTCCTTCGGATCCAGTAATCATAGACAGGGCGAAACCTTGGTTTGGCCCAAAACAAACAACGACGCACCCCTTGGGTGCCAACCCCAATATGGAAAAATTTACACCCGCTGCTTTCTTATTATCCCCCGGTAATCGCCTTATCCCGCTCTGTACTTCGACAAATGCGACAGAGACCTGCAGTACCTCGAATGTCGGCGTACGGAGTCCTTCATTTGCGGCACCGTTAAAGTCACCCACGTTCGTGTTGCACAACATGCCGAGGCATGCGGCCCCGCGGACCGGGGATGCCCGGAACGTACCTGGCCATCCGTCAAGCGAGAATGGGGTTGGGGGTGGGGTGCAGGGAGATAAAACCGAAAACAGCAACGTCAGGAGATACGGAACAGGAATAAAAGAATTTAATTTATTATTTGCCGGGATTTCGCCGTGCAAGGAAAAAGAGACACCTCCGATGCAGAGGAGGGCCACTGTTTTTCGGGTTAAAAGCTGCTGTTGGTTAATTGGGGGCTCAATGGACGTCAGTCGTCTGTCCGTGCTGGAGAATGGTTTGAATGCGAATCTTGTATAG
- Protein Sequence
- MYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRAKPWFGPKQTTTHPLGANPNMEKFTPAAFLLSPGNRLIPLCTSTNATETCSTSNVGVRSPSFAAPLKSPTFVLHNMPRHAAPRTGDARNVPGHPSSENGVGGGVQGDKTENSNVRRYGTGIKEFNLLFAGISPCKEKETPPMQRRATVFRVKSCCWLIGGSMDVSRLSVLENGLNANLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01308483;
- 90% Identity
- iTF_01308483;
- 80% Identity
- iTF_01308483;