Rarc004298.2
Basic Information
- Insect
- Ricinus arcuatus
- Gene Symbol
- osa
- Assembly
- GCA_027475445.1
- Location
- JAOXJT010000004.1:3016153-3030118[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-25 3.4e-21 76.6 0.0 2 89 515 602 514 602 0.92
Sequence Information
- Coding Sequence
- ATGCTCGAACGTTTCTTTCTCGAATCGAGTCGATTGTTAACGCCAGTAGGGGAGTTCTGCTTCTATCTTATACAAAGTCGAAGGCTTGGAATTTTTCAATGCTACTTCATCGAACTCACGGGAGCGAACAGCAATGACTCGAACAGTGGACACGCCGGGCCTGGGACGCCGAATTCTGGCATGAGACCGACTCCTTCACCGACTGGCTCGACGGGATCTAGATCGATGTCACCGGCAGTTGGTCAGCAAAACATTCCAATGCCACCGCGACCTTCAAGCGGACAGTCTGACAGCGGAGCACCGGCAAGACTGAGCCATTCTCCTTTGGCTCCTGCGGGGCCGTATCCTCAGCCTCCGCACGGTGCTCATCCGTACAAGACTCCACCCCACGTGCCACCGTATTCGCAGGCAGGCCAGCAGTATCCTCAGGGCAATTATTCGCCTCGGCCGGGACCTCAAGGAATGCAATATGGACCGGCCCCAGGGCAGTACCCTCAGCCTCAGCCAAATAATGTTCCCGCGGGTCCCGGGCCCTATCCCGGGCGGCCCGTTACAAATCATGCTCCTCATTCGCAATACTCAGGTTATCAGGGCTGGGGCGGTCCTCAAGGTGCTCCTCCTATGATGAATCAGAGCGGTCCTCCGGGCATAATGTCCGCTCCGGGTAACCATTTACCGCCGAACGGTAAGGGAAACGCTCAACCTCAGCCGACTCCTCCACCGAATCAATCTTCCAATCCTGCCGGACCTCGCCCTCACACTCCTCCTCATTATCTCAAGCAGCATCTCCAGCATAAAATGGGATTCACTGGACCGAGTCCGGGCATGCCCCCGAGTCCCGGACCCCCGCAGAGCTATCCTCCACCGGGCATGGGTCCTCCCGGAGGGCTTCATCATCATTTAGGATCGCAGTCCCCCATGGGACCTCCTCCGCCTTCCGGATTACATCACCCGGGAATGGGGCCTCCTCCGCCCCAGAATATGGGTCCCCCCGTTCCGCCATCTTCGACTCCCAACAGTCATATCGGTCACGAAGGAAGTTCCGGAGGAGGAATGCCACCTCCCTCGTCGACTCCGAATTCTCATTCTATACCTCACGTGGAAGACGCGGTGGCCCCTCATGACAATGGAATAACCACGACTGCAGTTGGACCCACGACTCACGTAACCCCAGCGAATTTGGGCAGCgttacatcggtggtgaccacgggccctgatggtgcgcccatggacgagggttcgcagcagtccactctgtcaaacgcctcggcggCTTCCGGCGAAGATCCGACTTGCACCCCGGGCAAATCCAGAAAGGATTTCCACAGCCATCCGACGACGCCGCAGAGCACCGCTCCATCCCCGGGAGCAGCGAGCGTCAATTCGATGCACGAAGACTACGACGTAAATTCCAGCCCTACCAGCTGGCCCAGAACGCCTAACAGTCCCGTTTTTAACAGCCACTTGCCCCAAGATTCATACCGTTCCGCTAAGaaaccggacagtctggggaaattgtatgagatggacgattcaccggaaagaagacactggttagacagactgctgtcattcatggaggaaagaggttcacctatcactgcttgcccgacaatatccaagaaccccctcgatctgtttcgattgtatttgtacgttaaggacagagggggattcatggaggtatgcaaggtgacgaaaaacaaaacttggaaagacatcgcaggactccttggaatcggtgcctcatcgagcgccgcatatactttgagaaagcactacacgaagaatcttttagcttacgaatgtcacttcgacagaggaggtatcgacccacaacccattatcaatcaggtggaagctcagtcgaagaaaaagggaaataaatctgcatcggtaccctcgcccgGCTCATCGAATTCTCAAGACTCCTTTCCCCCGGTGGGCTCCGGAGGCGGCAGCATGGACGGATACTCTGGTTACGGTTATCCTCCGGGATCCACGCCCGATTACAGTGGACCGAACCAGCGACCAACGCAGACAAGTGCTCCATCGCCGCATCCAGGCATGCAGCAGACAGGATACCCCGGTCAGGGTGGTTATCCAGGACAATATCCGGAACAATATGGTAGAGGTCAGGAGTACAATCAACAATACCCGCAGCAAGGATATCCACCTTCTCGTCCGGGGCCCGTCTATCCACAGTATCCTCCGCCTGGTCCAGAAAGTGACAACAGAAGCTATCCTCAAGGAGGAACGGCCACTCCTCCCGGTGGTGGTCCCGCCCCTCCGCCTCCCCCAGCGGGAACCAGTCAAGACCCATATGGCAGAAATTATCAGTCGAATTATTCTGCTGGTAGACCGGGTTATTCCACCCCCCCGGGCCAGCCAGCTTCTGCGCCAGGTCCGGGAAACTACCCGTCTCCTCCATCTCAGCAGCAGGAGTATTACAGACAGGAACAGATGGGGCAGCAATGTAGTTACCCGGTTTCCCAGGGCAGTACTTACCAAACGAGTCAGGTTTCTAGTTACCCCAATTCACAACTGGCCCGCCAGCTCGTTGCGCCGCAGAATGCCAAAACGCCATATCAAAATTATGGAGCGAGTAGTGCGGTGACGCCCGGTGGAACTGCACCGCCACCTTCCGGAACCACCGGTCAGTCAAATAAGACGATGCCGCCTCCGGCCCCTCAACCCAGGCGGCATCCCGATTTCGCGAAAGATCAGCCGCCATATCAGCCGTATCCGCAGCAGCGACCGGGATATGGTAACTGGCCCAACAGCCAATATCGCGGACAGTATCCTCAGCAGTGGAGTGGACCCGGTCCGAGGCCGCAGTGGGAGCCAAGGTATCCGCCACCATCCCAAGGGGGTCCGCCTCCGTCGCCCTATCCTCCGCCGCAGCCGGTGCAACAATGGGGAAACAGCATGCCCGTTGCAGGAGTCGGTCAGAGCTCTCCATTGCGGCCAGCCGGACCGAGGGTTCAGTATCGGCCGGATGGGAAACCTTACCCTCCTCCTCAGCCAGTTTTAGCAAAGAGTACGAGCGCTCAGCAAGTGGTTCCTCAGAAAAGAGAAATCGTCTTTCCTTCGGACAGCGTCGAAGCTGTATTGCCCGTATTGCACAAGAGGAGGCGATTGACTAAGAACGATGTGACGCCCCTCGAGGCCTGGCGCATTATGATGGCTTTGCGTTCGGGCCAACTGTGCGAAACGACTTGGGCTTTAGATGTCCTCAATATTTTGCTATTTGACGACACGACCGTTGCATATTTCGGTCTGGCAAATTTACCTGGACTGCTCGATATTCTATTAGAACACTGGCGCAAATCGCTAGACGACGTTTTCGAGCCCTCTCCCGATCAAAGCTATGAGGACAAAGGGGAAGTAGACCTCGGTGAGGTGAGCGAACTGCTGTGCAAGGAAAGCACAAAAATTTTCAAGTCTGTTCCGAATTTCTCTATGGTCACGATCAAGGGGAAGCCCGTCATGATAGTACCACGATCAGATTTATTTATTCGAGACGATCGCAAATCGTGGGACAACGAGGGCGAGGCCGGATCTGAAGACGAATCCCCTGACGTAGCACCTGCCAAATATATTATTTCTCCTTTTCGGGGCGAATTATTGAACTTGCCGTTTGCCCGACGTTTAGAAACTGTGAAGAAAGTAAAGACTGAAtcggaaaacgttgttaataataataataataataataataataataataataataataataataatactaataaaaataatagctgcagtaataacattaacaatagcaacagcaacaaaaataatactgataacaataaaaaagagacggacttgaaagCAGAGGAAAAATTCTATAAATTAAAGTGTAAAGATGTAGCCGATAGCAAAAGAAATTTAGTTGATATTAAAGAAAATAGTGATGAACAAATTTTAGCTGAAAAAGACAACGAAAAAGAGGAGAAGGGTGACGAAATTGGTGTTGAGACAGTAAAGAGAACAGAAAAAAGTGAGATTAAGATGGAAGAAGAAGAAAAGCCCAAATTAAATATTCGGGATCCACAGGGGATACTGAAAAGGAGGAGGATGTCAGACTGCGAAGACGAATGTTATGCGCGTGATGAAAGCAGTTTGCTGCTGGCTGGGGAAGCGCAAGATGCCCTCGCCCGGAGGTGTATATGCCTCTCGACAATTATTAGGAACTTAAGTTTCGTTCCCGGTAACGAAACCGAAATGGCTCGCTCCGGCGTGTTGCTGACCGTTTTAGGTCGGCTACTTCTTCTGCACCATGAACATCCTCCGCGGCAGACTCAGCAAAGAAATTATGACAGAGAAGAGGATGCCGATTTCGCGGATTCTTGTTCTAGCTTACAGggtgaaaatgaatggtggtgggattatttgcaccacattagggaaaacgtattggtcacatgtgctaacatatgtggtcacatggacctTGCCAGTCATTTAGAAGAGATCTCAAGACCGATTGTTGATGGTCTCCTGCATTGGGCAGTATGTCCGGCAGCCGCCGGTCAGGATCCGTTTCCTACTGTAGGCCCATCATCTTCCTTATCTCCTCAGCGACTCGCACTTGAAGCTCTTTGCAAACTATGCGTTACAGACACAAATGTAGATCTCTTGGTTGCGACTCCGCCATATTCACGACTAGAAAGACTTTGTGGTGTCCTCTGCAGGCTGTTATGCAGGGGTGAAGATCAGGTATTGAGGGAATTCGCCGTTAATCTGTTGCATTATTTGTCTGCGTCGGACAGCAGTGTGGCCAGAACCGTCGCATTGCAGACTCCGTGCGTCTCTCTCCTGTTGTCTTTCATTGAGCAAGCCGAACAAAGCGCGATGGGAGTTGCTAACCAGCACGGCATAAACGCTCTTCGTGACAACCCGGATTCGATGGGCACCAGCCTGGACATGCTGCGGCGGGCGGCGGCGACGCTCTTCCATCTGTCGAGGCATCCGGACAATAGGCCACTCTTCGTCCAGCAAGAGGCGCGCCTTCTTCAACTCGTCATGTCCCAGATCCTCGATCAACAAGTCGCTTCGGTCATCTCCCGCGTTCTTTTCCAATGCTCCCGCACATCCTAG
- Protein Sequence
- MLERFFLESSRLLTPVGEFCFYLIQSRRLGIFQCYFIELTGANSNDSNSGHAGPGTPNSGMRPTPSPTGSTGSRSMSPAVGQQNIPMPPRPSSGQSDSGAPARLSHSPLAPAGPYPQPPHGAHPYKTPPHVPPYSQAGQQYPQGNYSPRPGPQGMQYGPAPGQYPQPQPNNVPAGPGPYPGRPVTNHAPHSQYSGYQGWGGPQGAPPMMNQSGPPGIMSAPGNHLPPNGKGNAQPQPTPPPNQSSNPAGPRPHTPPHYLKQHLQHKMGFTGPSPGMPPSPGPPQSYPPPGMGPPGGLHHHLGSQSPMGPPPPSGLHHPGMGPPPPQNMGPPVPPSSTPNSHIGHEGSSGGGMPPPSSTPNSHSIPHVEDAVAPHDNGITTTAVGPTTHVTPANLGSVTSVVTTGPDGAPMDEGSQQSTLSNASAASGEDPTCTPGKSRKDFHSHPTTPQSTAPSPGAASVNSMHEDYDVNSSPTSWPRTPNSPVFNSHLPQDSYRSAKKPDSLGKLYEMDDSPERRHWLDRLLSFMEERGSPITACPTISKNPLDLFRLYLYVKDRGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEAQSKKKGNKSASVPSPGSSNSQDSFPPVGSGGGSMDGYSGYGYPPGSTPDYSGPNQRPTQTSAPSPHPGMQQTGYPGQGGYPGQYPEQYGRGQEYNQQYPQQGYPPSRPGPVYPQYPPPGPESDNRSYPQGGTATPPGGGPAPPPPPAGTSQDPYGRNYQSNYSAGRPGYSTPPGQPASAPGPGNYPSPPSQQQEYYRQEQMGQQCSYPVSQGSTYQTSQVSSYPNSQLARQLVAPQNAKTPYQNYGASSAVTPGGTAPPPSGTTGQSNKTMPPPAPQPRRHPDFAKDQPPYQPYPQQRPGYGNWPNSQYRGQYPQQWSGPGPRPQWEPRYPPPSQGGPPPSPYPPPQPVQQWGNSMPVAGVGQSSPLRPAGPRVQYRPDGKPYPPPQPVLAKSTSAQQVVPQKREIVFPSDSVEAVLPVLHKRRRLTKNDVTPLEAWRIMMALRSGQLCETTWALDVLNILLFDDTTVAYFGLANLPGLLDILLEHWRKSLDDVFEPSPDQSYEDKGEVDLGEVSELLCKESTKIFKSVPNFSMVTIKGKPVMIVPRSDLFIRDDRKSWDNEGEAGSEDESPDVAPAKYIISPFRGELLNLPFARRLETVKKVKTESENVVNNNNNNNNNNNNNNNNNTNKNNSCSNNINNSNSNKNNTDNNKKETDLKAEEKFYKLKCKDVADSKRNLVDIKENSDEQILAEKDNEKEEKGDEIGVETVKRTEKSEIKMEEEEKPKLNIRDPQGILKRRRMSDCEDECYARDESSLLLAGEAQDALARRCICLSTIIRNLSFVPGNETEMARSGVLLTVLGRLLLLHHEHPPRQTQQRNYDREEDADFADSCSSLQGENEWWWDYLHHIRENVLVTCANICGHMDLASHLEEISRPIVDGLLHWAVCPAAAGQDPFPTVGPSSSLSPQRLALEALCKLCVTDTNVDLLVATPPYSRLERLCGVLCRLLCRGEDQVLREFAVNLLHYLSASDSSVARTVALQTPCVSLLLSFIEQAEQSAMGVANQHGINALRDNPDSMGTSLDMLRRAAATLFHLSRHPDNRPLFVQQEARLLQLVMSQILDQQVASVISRVLFQCSRTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00362326;
- 90% Identity
- iTF_01308476;
- 80% Identity
- -