Rfer004784.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- PIAS3
- Assembly
- GCA_014462685.1
- Location
- JAACXV010014401.1:984736-990044[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.38 4.3e+03 -2.1 1.6 8 38 156 186 150 190 0.74 2 2 2.6e-25 3e-21 75.3 5.6 1 50 291 340 291 340 0.98
Sequence Information
- Coding Sequence
- ATGTACTACAGGCAAGCTGGCACTTTGTCAGTCCCACCACAGAACAGTTCTCCTGTAACCCAGGAACAGGTACAACCAAATACAATGCCACAACAGCCAGGAAATATAACACGTACCACTGCTCAAGTACATCCATTCAGTGTGGATAGATCTATGACAacAAGACAAGCAGCTGCTGCTACTATATACAATACTCCTTCAATGAATCAAAACATGTACTTTTCACAATATGCAAATCCTAAGCAACCTGtattatcaaatacatttcctgTTCACCCAGATGTTCGATTTCGTAGGTTAccattttttgatattcttGCGGATCTCATAAAACCTTCAACTTTGGTACCTCAAACAAATCAGCGAATGCAAGAACAACCATTTTACTTTCATCTCACTCCCCAACAGGCAACTGATATAGCAAGTTCAAGAGACATACGTCCAGGTGTTAAATGTGATTACATTAAACAAGTTCAATTGAGGTTTTGTTTACTAGAGACTACTTGTGAACAAGAAGATTGTTTTCCTCCCCAAGTGATGGTTAAAGTTAACAATAAGCTATGCCCTCTACCAaaTCCAATTCCTACAAATAAGCCTGGAGTGGAGCCAAAACGTCCCCCGAGACCAGTAAATATTACACAAATGGTCAAGTTAAGTCCGACAGTTGCAAATCAAATATCAGTATCTTGGGCGGCAGATTATGGACGTGGTTATGCTATGACTGTGGCATTAGTACATAAGCTTACCTCATCAGATCTATTACAAAGGTTACAGAAGAAAGGTGCCAAACATTCAGATCATACGAGAGCTCTGATTAAAGAAAAACTAAGTGATGATGGGGATTGTGAAATTGCTACAACTAGTTTGAGAGTTTCATTGATGTGTCCACTGGGTAAAATGCGTATGACCACACCTTGTAGGCCTCAAACTTGTGGGCATTTGCAGTGTTTTGATGCATCCTTGTTCTTACAAATGAATGAGCGTAAACCTACTTGGAACTGCCCCGTCTGCGATAAGCCAGCATTGTATGACAATTTAGTGATTGATGGGTATTTTCAGGAAGTTTTAAACTCTTCACTTTTACCATCAGACTGCAATGAAATTCAGCTCCTTCAAGATGGAAGCTGGAGTAGTCATACGAACGAAAAGAAATCAGTCAAAACTGAAAAATCGACCAGCAATAGCATAGCCATAGATGATTCAATTGAAATTATTGAGGACAATGTTGaaattgtcTCTTCGAATACACCCACATCATCTTCAACAGATAAACCTAGTCAGCCGGAGAAAAAGAAGGAGGTGGTTGATCTAACGTTATCCGATTCCGACGATGACGAGCCATTGGCGAAACGTAAGCCACCACCAAAACCAGATTCGACAATCAAATTTAACGATACCCAAAGTAACATAAGTTCATCAAGTTCTACTCAACCACGTACCACCACGACTCCTGGTCCCTCCTCCGTTTCCAGCTCAGGCTATCCGGCCAGTCCAGGCATAATTACCCTTGACAGTCCTTCACCGCCACAGTCACCGCAGCCTACAGTTCAACAAACCCCGAATCCTAACCCATCTTGTATGATGACTGCGCCGACTACACAGACAAATTATAGTGCGAATGGTAATATAGCTAGCCAAGGCACGTTCGGCATAGCACCGACCAATATGCCATTTTTGGACATGGAAAATGAAGCCAGTGGTGTTAATATTAACTATACGcagagttattaa
- Protein Sequence
- MYYRQAGTLSVPPQNSSPVTQEQVQPNTMPQQPGNITRTTAQVHPFSVDRSMTTRQAAAATIYNTPSMNQNMYFSQYANPKQPVLSNTFPVHPDVRFRRLPFFDILADLIKPSTLVPQTNQRMQEQPFYFHLTPQQATDIASSRDIRPGVKCDYIKQVQLRFCLLETTCEQEDCFPPQVMVKVNNKLCPLPNPIPTNKPGVEPKRPPRPVNITQMVKLSPTVANQISVSWAADYGRGYAMTVALVHKLTSSDLLQRLQKKGAKHSDHTRALIKEKLSDDGDCEIATTSLRVSLMCPLGKMRMTTPCRPQTCGHLQCFDASLFLQMNERKPTWNCPVCDKPALYDNLVIDGYFQEVLNSSLLPSDCNEIQLLQDGSWSSHTNEKKSVKTEKSTSNSIAIDDSIEIIEDNVEIVSSNTPTSSSTDKPSQPEKKKEVVDLTLSDSDDDEPLAKRKPPPKPDSTIKFNDTQSNISSSSSTQPRTTTTPGPSSVSSSGYPASPGIITLDSPSPPQSPQPTVQQTPNPNPSCMMTAPTTQTNYSANGNIASQGTFGIAPTNMPFLDMENEASGVNINYTQSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189056;
- 90% Identity
- iTF_00376775;
- 80% Identity
- -