Rfer012141.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- Zmiz1_1
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000229.1:266923-274059[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.099 1.1e+03 -0.2 0.7 4 24 506 526 503 531 0.88 2 2 2.8e-26 3.1e-22 78.4 4.5 1 50 583 632 583 632 0.98
Sequence Information
- Coding Sequence
- ATGCTGGGATATACTTCCTATAGGGACTGGTCTCCGGGTGGTCTCAACACCCAGCAGCAGTTGTCCGTCGTGACCACAGTGTGGGGAGTCACCACGTCCAGTCAGTCGGGCCCCCACGGGTCGTACGCAGGGGGCCCGGGCCCTCAACCCTTTTCTAAGGGCCAACCAAACGGATTCGCCGGACAAAATACTTTCCGGGGACATGGACTGAATAGTTATGGTCCAGGTCCTAATGGCATGAACCAAACTGATCCAACGGGGGGCGGTTATCCTACACAAGGTAACGCTCTCTCTACAGCGGCCATGGTGGCAGCGGCGACTGCGACCGCTACGGCCACCGCTAGCGTGGTGGCTTTACAGGACAACGGCCAGTTCGGCAACCAGCAATACAACCAGGGTTACCAACAACGGATGATGCCCATGAACGGAATGAACCCCATGGGAATGAATGGGATGAATAACATGAACCAGATGAGTGCTGCCGCCATGCACGGCATGAACGGAATGGGTAACATGGGCGGTATGGGTCCTAAGATGGGCATGCCCATGCAGGGCCCCGTTGGAGCCACCTCCAACACCATGTACCCCAACAGGCGGATGGCGCCATATCCTTCTCCCGCCATGCACATGTCGCAGAAGAGGGCTGGGCAGAACTATCCCAACGGACCTTGTCCCACCATGGGTAATCCCAACATGGGCCCCGGTAATATGGGCAATCCTAACATGGGCTCCATGGGACCCACCATGGGTCCGAACCCGATGAATCCTAACTTCAGTCATAACAGTCAATACGGTAGCTACGGGACGAGACAGGCGAATTTTAATCAGTATCCCACCCAACAAAGCCTGGGACCCACCGGCAATTTTGGGCCAGGTCCAGGCAATATGGGACCCGTGACAAACCCCAGACAACTACGGGGTGCCACGCCTCCTTACACTAACCAAGGGCAGTATTTTAATGGTTCTCTGAACCAATTTCCTACAAATAACTCGGGTCAGTTTAGCATGAGCAACACGGGACACAATGTTCAAGGACAGTACAACACTTCGAGCCAGTTTCAACAGGACGTGGCGATGAGAAACAACATGAACTACCAACATAGTCCGATACCAGGTAATCCCACACCACCCTTAACACCGGCCAGCAGTATTCCGCCTTACATCAGTCCGAATCCTGATGTTAAACCAAACTTTAACGATCTGAAACCACCACTGCCACCGAAAGATGAAGAACTGAGACTCACTTTCCCAGTCAGAGATGGTATCATCTTACCTCCGTTCCGACTAGAACACAACTTGGCAGTAAGCAACCACGTATTTCAACTAAAACCGACCGTTCATCAGACGTTGATGTGGCGATCAGATTTGGAGCTTCAGTTGAAATGCTTCCACCACGAGGATCGACAGATGAATACCAATTGGCCTACTAGCGTGCAGGTGTCTGTTAACGCAACCCCACTGGTCATCGACAGAGGCGAGAATAAGACCTCACACAAACCCCTGTATCTAAAAGATGTCTGCCAACCTGGCAGGAATACTATTCAGATCACCGTAGCCGCTTGTTGTTGCTCCCACCTTTTCGTTCTTCAATTGGTACACAGGCCGAGCGTCAGATCGGTATTACAAGGCCTTCTCAGGAAACGACTTTTAACAGCTGATCATTGCATCGCGAAGATCAAAAGGAACTTTAATAGTACTGGATCTGGACCTAATGACAGAGATGCGGTCGAACAAACGGCTTTAAAggTTTCGTTGAAATGTCCCAtcacttttaaaagaattactTTACCTGCTAGAGGTCATGAATGCAAACACATACAATGTTTCGATTTGGAGAGTTATCTGCAGCTTAATTGTGAAAGAGGCTCATGGCGTTGTCCTGTTTGCAATAAACCTGCACAACTTGAAGGTCTGGAAGTTGATCAATACATGTGGGGAATTCTGAACAACTTGAGCACTAATGAAGTAGAGGAAGTAACCATTGATAGTCAGGCTAACTGGAAGACTGCTAAGAATGGCATTAagCTAGAAGATGAAGGAAATGATTCCTGCGCTTCTAAGCGTATGACAAAAGCTATGTCACCCGGTAGTATGACTCTGCCTACCATGAACAACTGGGACATGTCTCAAGCGATGAGTCCTTATTTGCCGCCCGATATGAATAGTATTGCTAGTGGTTCGATGATTAACGGACCCCAAAGCTTCAACGGAAATTCCAGAGGAGGCGGAATAGATTCGTCTAATATGGGCTATACCAACTCGGGCGAGTATTTAGGTGGAAGCGGACCTCTTTCACACCTAAGCGAAAGCGTTAACTCCTTGGATCCTCTCAATGCCATGGAGAAAAGCTTAAACGAGCAgATGCCCCACACACCTCATACTCCTCATACGCCCCATACACCCCATACTCCGGGTGGTGGTACTCCGGGTAGCGCGCACACGCCTGGCGGCACTACGGGACCGCCAAGCGTGCCTCCTCCGAATACGGATAGTCATAACACCAGCGGAAATGGAAGCGGTAGCTCCGGGAATGGCTCCAACGGTTCTGGCAACAGCACGAGCGGAAACAATGGGAACGGTAGTAACAATGCCACCGGTAACAACGACAGTACGGTGCCTGAAATACCCAGCGATCTGAATTTCGACCCCGCAGCTGTCATTGATGGCGAAGGAACCGGACAGGAGGCCCTTAATCTGCTACCAGATAGTGTCGACCCCATGGAGCTACTGTCCTACTTGGATCCTCCCGACCTGAACACGCCGCCTTCCAGCGGGAGCAGTTCAGGTCATAATAACACGTCGGCCAACGACGACATCCTAGCCCTCTTTGAGTGA
- Protein Sequence
- MLGYTSYRDWSPGGLNTQQQLSVVTTVWGVTTSSQSGPHGSYAGGPGPQPFSKGQPNGFAGQNTFRGHGLNSYGPGPNGMNQTDPTGGGYPTQGNALSTAAMVAAATATATATASVVALQDNGQFGNQQYNQGYQQRMMPMNGMNPMGMNGMNNMNQMSAAAMHGMNGMGNMGGMGPKMGMPMQGPVGATSNTMYPNRRMAPYPSPAMHMSQKRAGQNYPNGPCPTMGNPNMGPGNMGNPNMGSMGPTMGPNPMNPNFSHNSQYGSYGTRQANFNQYPTQQSLGPTGNFGPGPGNMGPVTNPRQLRGATPPYTNQGQYFNGSLNQFPTNNSGQFSMSNTGHNVQGQYNTSSQFQQDVAMRNNMNYQHSPIPGNPTPPLTPASSIPPYISPNPDVKPNFNDLKPPLPPKDEELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPTSVQVSVNATPLVIDRGENKTSHKPLYLKDVCQPGRNTIQITVAACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFNSTGSGPNDRDAVEQTALKVSLKCPITFKRITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNNLSTNEVEEVTIDSQANWKTAKNGIKLEDEGNDSCASKRMTKAMSPGSMTLPTMNNWDMSQAMSPYLPPDMNSIASGSMINGPQSFNGNSRGGGIDSSNMGYTNSGEYLGGSGPLSHLSESVNSLDPLNAMEKSLNEQMPHTPHTPHTPHTPHTPGGGTPGSAHTPGGTTGPPSVPPPNTDSHNTSGNGSGSSGNGSNGSGNSTSGNNGNGSNNATGNNDSTVPEIPSDLNFDPAAVIDGEGTGQEALNLLPDSVDPMELLSYLDPPDLNTPPSSGSSSGHNNTSANDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01108118;
- 90% Identity
- iTF_00376774;
- 80% Identity
- -