Rfer004831.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000304.1:350465-360098[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.25 5.6e+03 -2.7 0.3 67 103 43 79 20 91 0.47 2 4 2.8e-104 6.4e-100 333.9 8.5 1 218 178 387 178 387 0.94 3 4 0.6 1.4e+04 -3.9 0.6 80 85 410 415 388 436 0.37 4 4 0.25 5.7e+03 -2.7 0.5 53 82 499 527 484 540 0.47
Sequence Information
- Coding Sequence
- ATGGGAACAACTGAGTCAAGTCTAGATTTGGAACTGGACGGCTTAAAGTCAATTGTTTATAGTGAATCACCAATTCACCAAAAGGCGACCATGTGTGATACTTGCAAATCAAACGAGCCCTCGGCCAACGAGAAATCGTCCAAGGAAACAATCACGGTTCTATCGATGAACGATGGCGAGGATTCGGCAACGGAAAGTTTACCCGCTCCGGAGGAACTCGTTGAAGAATCGCACGACCGCTCCGACGGTTCTGATTCCGGACTGGGTTCGGAGATAGCCGAGGAACGGGTGGGCATCCCACCAAGCACGACTAATTTTGAGAGCGACAGCGAGACCACCTTCCTGGATCGTATCAATACCGAAACGTCGGCGGACGATAGTCGGACCAAAGAAGAAACCGATCAGTCAATTCCTTCCAACGGTGGTCCAAGACCTATTTTAGATTTAGTAGCTATTCTTAAGAAGGAACCAGTTAAAAGTAATCTAAAACGAAAATTATCGATCGGCCAAGAGGACGATCAGCCTAAAGTGAAGAAAAAACGCGGGATCACGTTTGATAGCGTGACAGTCTTCTATTTTCCACGGGCGCAAGGTTTTACCTGTGTACCATCACAGGGTGGGTCCACATTAGGCATGGGAGCTCAACACTACCAAGTTAGAAAGTTTTCTATTGGAGAACATGCTAACGAACAACGTAGGATACATCGACAACTTCTTCAGCAATTAAGGTCAGAAAGGAGTGTAACAACGGGCGTGGCAGCATCATCGAGTGATGATAGCGATAGCGAGGATGAGATTAGTGATGCGTCCGAATCAGAAATGGACTTGGAGAATTATTACTTTCTACAGCCCGTACCCACTAGACAGCGGCGTGCTTTGCTGCGGGCAGCTGGAGTGCGAAAAATCGACTCCATAGAGAAGGACGAATGTCGAGACATAAGATCGTCGCGTGAATTCTGTGGATGCGGCTGTAAAGGTTACTGTGATCCGGATACCTGTTCTTGTAGCCAGGCCGGCATCAAATGCCAAGTGGACAGGCTAAATTTTCCCTGCGGATGTACCAAGGATAATTGCGGCAACTCTTCTGGTAGAATTGAGTTTAATCCCGTAAGGGTACGAACGCATTTCATCCATACTCTTATGAGACTAGAACTAGAGAAGAAACAGGAGGAGGAAATAAAAGAGAAGAAGGATAACTGGATGAACAACGAACGGTTAATGGGCCAAAGCAACTATCAAAAAGATGAACAGAATCAACAACATTTCAAGGTCGACGTAAGCAAATGTAGCGGCAGTCTGTTAAGAGACATTAGTTTAAATTCTCATGTTGAGGTGGAGAACTGTGTACATACTGGTAGTTTTACAAATCTTCATTATGGCGCACCTGGGGAAGGACCAGGCGCTGTGGACCATGTAGCCCCAGCAGCGAACTTCGCTGAGCTACCTGCTCGTGAAGATTCTCTTGATCTCTATACATTTCGTGAGAACTGCTACAATGACGAAATAGGAAGGAAACATCAACAACAGCACCAGgtaaCTTCTCGCAAACGACCACTACAAATTTCGACCACTTCAGCACCGAAAACTACTCCCACGAAACGAAAGAGAGCCAATACACAAATTTGA
- Protein Sequence
- MGTTESSLDLELDGLKSIVYSESPIHQKATMCDTCKSNEPSANEKSSKETITVLSMNDGEDSATESLPAPEELVEESHDRSDGSDSGLGSEIAEERVGIPPSTTNFESDSETTFLDRINTETSADDSRTKEETDQSIPSNGGPRPILDLVAILKKEPVKSNLKRKLSIGQEDDQPKVKKKRGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMGAQHYQVRKFSIGEHANEQRRIHRQLLQQLRSERSVTTGVAASSSDDSDSEDEISDASESEMDLENYYFLQPVPTRQRRALLRAAGVRKIDSIEKDECRDIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCTKDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKKQEEEIKEKKDNWMNNERLMGQSNYQKDEQNQQHFKVDVSKCSGSLLRDISLNSHVEVENCVHTGSFTNLHYGAPGEGPGAVDHVAPAANFAELPAREDSLDLYTFRENCYNDEIGRKHQQQHQVTSRKRPLQISTTSAPKTTPTKRKRANTQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376332;
- 90% Identity
- -
- 80% Identity
- -