Rfer000574.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- CAMTA1
- Assembly
- GCA_014462685.1
- Location
- JAACXV010013742.1:4961-26490[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-35 4.3e-31 107.4 1.5 40 116 2 76 1 76 0.97 2 3 0.29 6.5e+03 -2.8 0.0 26 62 208 244 201 248 0.78 3 3 0.31 7e+03 -2.9 2.1 13 86 1242 1321 1236 1329 0.57
Sequence Information
- Coding Sequence
- ATGTTGTTATATAGCAGAAAGAAAGTCCGATACCGTCGAGATGGCTACTGTTGGAAGAAACGAAAAGATGGAAAGACCACGAGGGAAGACCACATGAAATTGAAAGTACAAGGAACTGAGtGCATCTATGGATGTTACGTTCACTCCGCCATTTTACCAACTTTCCACAGACGGTGTTACTGGCTGCTTCAGAATCCAGATATAGTTCTGGTGCATTACCTCAACGTTCCGTATCCTGACGACAACAAACTGGCAGTCATCACGCCCAGTCTCGCCCTGTGGGCGGACAAGAAGGAATGGACCAAGGACGAGCTGGTCTCCCAACTGAAACCGATGTTCTTCAGCGAAGATGAACCCGACTTGAACAACGAATTAGAGATATCGaattttaaaatgcaGACCGCTGAAACGGTGGAGGCCATAGTCAGTCAGTTGATGGAGAAGCAACGTGTCGCTCGCCAAGCAGCTTTGGTCAAGCAATTGGAGTGTGGCTGTCCTGACTCAACGTGTGCGGATAGCAAGAGTTGTTCCCACCCAATGCGCCGAATCACCTCAGCCAAGTCCAGCTCCCCTCTTCCAAGTTCCAGTACAAATTCCAGAAATACCAGCTCGACATCCGAAAGCAGCAATCAGGTATCTTCAACGACCGGCTCTGGAACGTTACATCTCAGCAACAATAACTCGCCCAGGGTCTACTCCAGAGACAGGAGCCAGCTGAACAATCAAAACAACAGCAATTGCTCATCCAGTTCTGCTAACACTCCCCCGCTGGTGTTGAGTTTATCGCAGATTCAAGGTAGTGGAGGTCTTCTGATACTCAATAGCAATACAAATAGTACAAACCATCAGAACTTGGTGAATCCCGTGTCTGTTGCTAACTTTATGTCCTGCAACACCAACCGAACCTTGGTGAAGGAACCCCGAACGAGCCATCTGATCCTGAAGCAGGAAGTCATGGACACCAATAACACCAACACAGCGTGTCTGCATCCGTCAGTTAGCAAGCAGGAAACCAAGTCTAACCAACAGAGGGATAACAAAATGGAGCTGAACGACACCCTACGACAATCAATCTTCGACAGCAATATTTATACCAGTACTCCGGTTCAACAGCAACAACAGGGGCTTCAGCAGCACCAACAGCAACAGCCACAACATTCCAGGAATAATGTACGGACCATTTTCAGATCGCAGTCTCAAACGGAAGTGGTTATGTCCAGTGCTCCATCCACACCCTCCAAACTAATGGACACCGGACACGATGAAGTAACCACCGAGGACTTTAAGCATCAGACCTTCTGCGACGATACGGTAGTACTGCTAGGCACAGATTCCAGTGGATCTTTAGTGAGCAAAAGCGACGGTTCTTCCATTATAAACGGGGGGTTCTTCAACGAAACCCTGGACTTGTCCCAGGAGGATATACAGAGGACCCTCTCAGCCAACATGCCCATGTGTTCAAGCGACCTCGAGAGCCACCATCAAAATCACGAACCAGAAACCGACACCACCACCACGCAAATCAAAAAGAGAAACGACCAACAAAATCTAACCGgtgatataaacCCCATGGACTTCATCGACAACTGCGATGTGGTAGTCTCGCCCACACACGTAGTGGACGATGACGTGTTCGTTAATCTGGACGCCTTCGACATGCTCGGCGAGTTCCCCGAGCTGGAAGGTCTGGATTCTAGTCATGCTTCCCTCCTAGATGTCAATCCGTCCGATGCTAGTAGAAATGGCAACAGTGGGAAGGATCAAACCGAAACGAACCAGACCCATGGACAACATCAAGTACAAAATGGGACTCAGAACATGGAAGgtTCGGCCAAGATCACCGATTACTCACCTGAGTGGGCTTATCCGGAGGGTGGAGTAAAGGTTCTTGTCACTGGACCTTGGCACTCCACTGGATCATACACCGTTTTGTTTGATACATTCCCCGTTACAACTACCCTAGTTCAAAGTGGTGTATTAAGATGTTATTGTCCAGCACACGAAGCTGGCCTAGCCACATTACAAGTAGCGTATGATGGTTACGTGATCTCCAACTCTGTGATATTTGAGTATAAGCTGCCTCCGAAGGAGGAACAATTAGCCGCGCCCGAGCCCAAGGTGGAGAGGTCTAACGACAACCTGTTGAAGTTCACCCTGCTTCAGCGGCTCGAGGCAATGGACGACCGGCTGCAGATCAAGCAGGAACCGTCGGACAACGATGCTGTCGAAGACACTGCCCTGTTCAGCCAGCCGAACTTCGAGGACCGTCTCGTGAATTTCTGCCAGAACATGACGTCGAGGATATGGAAGTTCGGCGAGGAGCTTAGCGTTTCTTGGTTCGCTAGTCATAGAGGTATGACACTGCTTCACTTAGCAGCTTCCTTAGGTTATTCTCGGTTAGTTTGCGCCATGCTTCATTGGAGAGCCGAAAATTCTTCGCTACTTTTAGAGACTGAAGTCGATGCTTTGAGCCAGGATGAATTGGGATACACTCCATTGatGTGGGCCTGCGAACGTGGTCACACAGAAACCGCTGTAATGTTGTATAAGTGGAATCACACCGCGCTGAACATCAAGAACAACGAGAACCAGACGGCCCTGGAGTGTGCCAGGTCGAACAACAACATGGACCTGGTGGAGGAGTTGGAAAAGCTGGAATTAAGACGGGACAAAGCGAACATGTTGCTGCTTTCGAGTCAGTCCAGCATGGACAACATCTCTCCCACAATTATCAGTCCTGCTAGCAGTATGGGCAGCTTGGCGTCAATATCGTCCAACAGTAAAAGTCACGATGGCGTGTTTCTACGCCCTGGTGCGGTTATTAGAAGTGAGTGTCATAAATCCAAGATACTGAATCTTGAACTGGACAGTGATAAGTTCTTAACGTCGTCTCCCAGCCCATTGCTTTCCGATTTATCGTCAAGCACCAGAGGCAGCAACGGTCAGAAATTGATCAAAAGACCATCAATCGATAGTGGAATTCACATGAGCTGTACACTGAGCTCGTCCGAAACCAACTCGCGACCCAAGAGTTCCAAAATGGGATCCAAAGAGAACATCAAACTCTCCAAATTCGATCGTAGCATGTCGTTACCCCTTCAATCGTCCCTATCGGCCAGGGAGAACTCCTTCGATTCCGACACAATGGATTCTGGAGGCAGGAAAATGGATTTCGCCCTCTGCGAGTTAGGCAACGAGCATCGCAGCAGCAGCCCGCTGATCGACGTTGAAGCTGTCAGCGATGACGATGACAATGACATCTGCGCGGGCGGGGCTGTAGGGGAACAGGACGCAAGAGTTCTCACCCTTGCAGAACAGATTATCGCTGCTATGCCTGAGAGgataaagAACGAATCGGAAGAACTAATGATGGATAATAGTCCTGGGCCGCCTGACAGTCAGCAACCAACGGAAACCCTGTACGACGTCTACATGGAACCACTCCTCGAGCAATCATCCTCAAACTTCGAAACAACTGAATTCAATTTCGAGTTTTCTGACAACAATTATCGgtATTGCGATGTCGGTACTCCTCAGTCGAGCTTGAGCCCAGCTTCCTCTAGCTGTTTGCAATCGCCCTGCTCGTTCACCCTGGATTCGCCATCACCCCCGCCAACCACGGCTGACTTCTGCGAATTCCTCCAAGCTTCCGGCAGCGTATTCGAGAAGGACTTCTCCAATTTAACCTTATCAGATCGTGAGCAACGAGAGTTATACGAAGCAGCCAAGATCATCCAGAAAGCTTATCGGTCATACAAAGGCAGGCAACAGCAGGAGCAGGACAAGGAACGACAAGCGGCTGTTATTATCCAAAATTATTACAGAAGATACAAACAGTACGCTTACTATAAACAAATGACACACGCAGCTACCGTGATTCAAAACGGTTTTAGGTCCTATTGCGAACATAAGCGTTTTAAAAAGAGTCAAGAGGCAGCAGTctgtattcaaaattattacagGAACTACAAGGAGGCAGGTGGTAGGGGAAGCAGAGAGGGGACCCCTGCCAGTTCAGGGCTCAAACGAACCTATTCGCAAAGACGCCAACATCAAGCCGCCCGGAAAATCCAGCAATTCATGAGACaatcaaaaaataaGTTACAGAAAGAACGAGCAGAAAAAGAGAGGCTGGGGGCCCTGTCAGCGGATGTCCAACCAAAGTTACAATCTCCAGGGGGCTCCTCCAGTTGCACAGGCATAAATAACAACAGACCGAATAACGAAAGAGATCAACTGGAAGATTCAAGATGA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISNFKMQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADSKSCSHPMRRITSAKSSSPLPSSSTNSRNTSSTSESSNQVSSTTGSGTLHLSNNNSPRVYSRDRSQLNNQNNSNCSSSSANTPPLVLSLSQIQGSGGLLILNSNTNSTNHQNLVNPVSVANFMSCNTNRTLVKEPRTSHLILKQEVMDTNNTNTACLHPSVSKQETKSNQQRDNKMELNDTLRQSIFDSNIYTSTPVQQQQQGLQQHQQQQPQHSRNNVRTIFRSQSQTEVVMSSAPSTPSKLMDTGHDEVTTEDFKHQTFCDDTVVLLGTDSSGSLVSKSDGSSIINGGFFNETLDLSQEDIQRTLSANMPMCSSDLESHHQNHEPETDTTTTQIKKRNDQQNLTGDINPMDFIDNCDVVVSPTHVVDDDVFVNLDAFDMLGEFPELEGLDSSHASLLDVNPSDASRNGNSGKDQTETNQTHGQHQVQNGTQNMEGSAKITDYSPEWAYPEGGVKVLVTGPWHSTGSYTVLFDTFPVTTTLVQSGVLRCYCPAHEAGLATLQVAYDGYVISNSVIFEYKLPPKEEQLAAPEPKVERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDNDAVEDTALFSQPNFEDRLVNFCQNMTSRIWKFGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDELGYTPLMWACERGHTETAVMLYKWNHTALNIKNNENQTALECARSNNNMDLVEELEKLELRRDKANMLLLSSQSSMDNISPTIISPASSMGSLASISSNSKSHDGVFLRPGAVIRSECHKSKILNLELDSDKFLTSSPSPLLSDLSSSTRGSNGQKLIKRPSIDSGIHMSCTLSSSETNSRPKSSKMGSKENIKLSKFDRSMSLPLQSSLSARENSFDSDTMDSGGRKMDFALCELGNEHRSSSPLIDVEAVSDDDDNDICAGGAVGEQDARVLTLAEQIIAAMPERIKNESEELMMDNSPGPPDSQQPTETLYDVYMEPLLEQSSSNFETTEFNFEFSDNNYRYCDVGTPQSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFLQASGSVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRQQQEQDKERQAAVIIQNYYRRYKQYAYYKQMTHAATVIQNGFRSYCEHKRFKKSQEAAVCIQNYYRNYKEAGGRGSREGTPASSGLKRTYSQRRQHQAARKIQQFMRQSKNKLQKERAEKERLGALSADVQPKLQSPGGSSSCTGINNNRPNNERDQLEDSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01107373;
- 90% Identity
- -
- 80% Identity
- -