Rfer005359.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- RERE
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000041.1:576828-631374[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 0.00014 22.2 0.2 2 45 127 171 126 172 0.91
Sequence Information
- Coding Sequence
- ATGGCACAAACTCAAGGCGAGATAAGGGTGGGTCCAGGAAACCAGGTAAAAGATGTTTATgCTCGTCTGCCCGAGTATAGGCCTGGGGTACCACCCGAACAGTTGTCACCTGATCCAGAAGATACGCATATAAGAGAGGAACTAAGgtGGGTACCTGCAATGACACTAGATTCAGATCTTTTAATGTATCTAAGAGCGGCGAGAAGCATGGCAGCTTTCGCAGGTATGTGCGATGGTGGCTGCCCGGAAGATGGAGCCAACGCAGCTTCCCGAGATGATACTACAATTAATGCTTTAGATGTGcTTCATGATTCTGGTTATGACCCGGGCAAAGCGCTCCAAGCATTGGTAAAGTGTCCCGTTCCCAAAGGAATAGACAAAAAGTGGAGCGAGGAAGAGACGAAACGGTTTGTCAAAGGATTGAGACAATTCGGAAAGAATTTTTTTCGCATTCGCAAGGATCTATTGCCTCATCGAGATACGCCGGAATTAGTTGAATTTTACTACCTCTGGAAAAAAACACCTGGTGCAAACAATAATAGACCTCATAGGCGTCGTCGCCAAGGATCTCTACGTAGGATAAGGAACACTAGGAATAGTAGAGGAGGTAATGGTGCATCCACAGCAGGCCGTACAAGTGGAGCAGCTACACCTGCTCCGGAGGCAACAGAAAATAGACCCTCCCCACAGCCTAGCGAAAAGAACCCTGGAGAAACTAGTTCGGTTACAGAAGACGACAACGATAATGAAAGTGAAGACGATAGTGACAGTAGGGAAGCTCAATATCGCTGTTCCCATTGTTTTACAACAAATTCCAAGGATTGGCAACCGGGTGGAAAAGACAGACAAATACTATGTTGGGATTGCAGGACGCACTAtcgaaaaaacaatgaattgccACAGCTTACAGTTCCTACTACAGCTGCAAATACTCCACCAGCAGaaGGACCTGATGAAAGTCCACAACGTATGCGTACAAGAAATAAAGGCGCAAAAGATCAACCGACAAACAATAGGTCGCGTCCTAAACGAGGTGGTACCGAAACGCCAGAACCAAAAACTCCCATTAAACAGAGCAATACtggaaatgataaaaacagTACTCCCAACGGACCAGGAACTCCAGGAAAGAAGAAAGGCAAAAATGATAAGCAGGAAACtccaaataaaaatagaaaaaggaCTCAGgaTAAACTCGATGATGGTGAAACAGACGAAAAAGAAGGTAGCGTATTTAAAAAGAAGAGAGAAAGAGCAGACAGTCCCGCAAGTGTCATTTCAGAATCTGGTTCTATTAATGACGAACCTGAATCTACAGAACCTAGTCACGACCCATCTGATGTTAATGGACTCCCAAATATTAATGCATCAAATAATAACACCGCTTTTAGTTCTACAGTTACCACATCAGTTAGTACTATTATTAGTacaaataacaatgtaataatgcAAGACTCATTAACAAATAAACCACCTCCAATTAAATCAGACGATGTAGAATCGAAAATTATAACATCTGTTACCACAAATATTACCCCAACTGTACCTGTTATAACTTCAAGCAAAATACAGTCTACAAATAATGTAGAATCAATACCGCTAAATGTATCAATAAGATTGCCAGAAGATATAAATGAAaggaaaaatttaattaaaagaaatttggaAGGTGCTTTGGATATGAAAGATATCAAATTTAACCCAGCATCAATTAAATTTGGGCAAGATGATATTAAGAAAGAATCTAACATAAAAACTGAACCAATACAGCCAAAGAAAGAGGAAATAAAGGACGAAATTTCAGAATCAATAGTAAATCAATCCACACTGCAAAGTTTTGAGCAAAAACCTCAATACAAAACGGAATTAATTATTCCGAAAGTCACTGTCGAAAAGCCAATTATAAAAGAAGAATTGGATTCTAGCAATGACGCTTCTCTGCTGAGTATAAGTTCAAAAGAGGATTCTAGTAGTCAGCCCCCATCACATAATCTTTCCTACAAAGATAACTCATTATATCTCCcgcaaaatatgaatataaaagaaTCTATTAGTTTTGGCATGAAAGATCCTccattaattaatcatttacaACCAAAGCATGCAATGAATcttaaagaaaacaaagaacATATTGTCAATATGAATCACTCAAGTTATCTTAAAGATGGAAGATCTCAAGACCAGTTAACTTTTGGTTATCAGAGCCGAGATCCATCTAGGGACTCTAATAATTCAGCTGCAAGTACCGTTATTAAAATGGAACCTAGGGAGGAACCTATGGAACTTACCAATCAAAATAGAAGTGAACCACAACCATATGGAAATGTGCAGCCTCTTAATATTCCACAAGTTATTCCAATGGCACAACATTTATCACAATCATCCAGAGCATCTGAAgaagAGAAATCAAGACAGGAAAAATCTGAGAGACCAGAAAGAATTGAACGATCAGATCATTCACAAATGCAAAGCTCAACTCCTATTGGGCAGCCACCACTTCCAATGCAGTCAAATAATTTAGTTACAATAGGTGGTTCGCAACCTCCCCCTGGCATGAGTCATTATGGATTTATGCCTCCTTATGGCCATCCTCATTCACCTAGAACCCTAGATAAACCATCCCCGCAACATATGCAGCAACAGaatGAACCTCAAAACTTGAAGATCAAGCAAGAAGTACCAGATAGCTTACCCCAAAATAACCCCCCTAGTAGTTTTGCTACTAATTATAGTTCCAGTAGTCTTCCACCAAGTTCTCAAGGATTACCACCAAGTGCCAGTTTTGTTCCACCACCAAATCACTTATCAGATCCACTGCAAAGTCTAAAGGATGTAAAGgtTCCTGGATACTTGCCGCCTCCACAACCGCCAACATCTCAAACACCTAGTTCATCCAGTTCCGAGCGGCCACCTTCAGGACCAGCAATTGATAGCATTAAAAAGGAACCAGATTTTGGGGGACCAAATATCAGTCGATCGAGCGTTAGTCCAGCTCAGCCTATTAGTGAAAAGTGCCTAACCCCTAAAACTAGTAGTACACCAACTCCACAGgttatttcTCAAACACCCCCATTACGTCAACCTCCTTCTTCACCTCATTCAGCCATAAATTTAATAAGTCCGAGCAGTAGCACTGGAAGTGTTGGTGGTGGACCCTCACATCCGCCAGTTTCATTGCCTGGTCCACCAAGTCATCCTTATTCAGGTGCAATGCAACCTCCTCATCTTATGCATCCCTCGTTTTTACatTTTCATGGGCATCCCGGATATCCAGCTTATCCGTTTGGAGCATACCCTTATCCTTACGCAGTGCCACAGCCACATGCTATACCTCCGCCATCATCGCGAGCTGATATCGCTTGTCCACCAAAAAGTATTGATACTGTAAGCGCAACTGTGATGTCTTcacaacataatacaagtagtACAGTAACAACAAAGAGGGAAACTAGGGAACCAGATGAACATGGTGGTGAAAGACATCAAAGCCATGAGATGACATTAACACATCATCAAAGCACTTCACTGAACAGctCAATACATGCAAGTGTGGAAAAACAAAACTATGGTGGCAGTAGTCATAGTATTACTATTTCTCATAGCACTAGTACTAGCTCCAGTCAATCAGTCCAGCACAAAGTTAATCAAAAAACTGTAAGAACAAGTTCACCTCACACTTCTGTATCTCAAACAACAATTCAAAGTAATAGCAGttcaagTTCTGTGAACCAACATACTCATCATCATACTCATACTCATCATGACCGAATGTCACCTAGTAGTGCTCAGTTATTGAGGCATGGTCTCCACCCGAAGGCTCCACCACCGGGAGGACCGCCACAAACTAATCCTCATCATCTAATGATCCAACCACCAAATATGGGGCATCATCCTGGTGCATTGGGGCCAGCTTCATTAACTGGAAGTTCATTGGATGCACTTAGAGCCCATGCAGCTCAGGCTGCTGCTAATATTCAACAGCAGCAGCAAGGAGCCATGCACCCTCCAAGCACATCACCTATGAATCCTCCTCCTAAAATTATACCTGAGGAAGTTGTTAAGATTGAGCCAGATGTGGAGGGCTCCCCCGAAGAAGATAGCCAAAGTAGCCCAATTGGACCACCTAGGGGCCCATCACCTGAACCTAGGATAGAGGATACTGAATGTCACAGAAGTCAATCAGCTATTTTCCTTAGGCATTGGAATAGAGGGGAACATAACTCATGTACTCGAACAGATTTAACATTTAAACCTGTACCAGACTCAAAACTAGCTAGAAAAAGAGAGGAAAGGTTAAGGAAGCAAGCGGAACGCGAACGAGAGGAAAGAGAAAGAGCTCAAGCGCAGGCTAGAAAAATTCAGACTCCAGATAAAGCAGATGTTAAACCACCATCAAGGGGACCTTTGGAAAGCTTATCTGCTCCATATGAAAGATTTCCGCGACCTGGATTTACTGATACACCTGCCCTTAGGCAGTTATCAGAATATGCTAGGCCTCATGCAGGTTTCAGCCCAGGTCATATGCCTAGatcttTAATACCTGGAGCAGTTATGGATCCCATGCTTCAGTATCAACTGAGTATGTATGGGCCTGGCGCAAGAGAGCGGTTGGAATTAGAACATTTAGAACGAGAGAAAAGAGAAAGAGAAATTCGAGAATTAAGAGAAAGGGAACTTAATGATAGATTAAAAGAAGAGATCATGAAGTCTGGCATGCGTGTACCACCCAATACTGTGGATCCTCATTGGTTGGAAATTCAACGGCGTTACGCTGCAGCAGGATTAGCTGGCGGTCCAGGCGGTCCACCGAGTTTATTGCCCCACCATTTTGCATTATACCCAGGGGCTAGTAGCGCGGCACAACTCTCTCAAATGGAAAGAGAGAGAATGGAACGATTAGGCATACCACCAACTGGAGGCCCCGGACCTGGAGGACCACCTGGGCACCCACATCATCCAGCTCATGCTGCTGCAGCACAGTTGGAAGCTGCTGAAAGATTGGCGCTTGCTACTGACCCCATGGTACGCCTGCAAATGGCCGGGATTTCGCCGGAATATCATGCGCATACTCATGCCCACACACATGCGCATACGCATCTACACTTACATCCGCAACAGCAGCAGGCTCAGCAAGAAGCGGCAGCTGCAGCAGCAGGTTTTCCATTACCAGCTTCAGGGACACCTGGCTATCCAAGACCCGGTTTAATACCTGGTAGAGATGCACCCTTAGGTTTACATCATCCTGATCTGTTAGGACGGCCGTATGCTGATCAACTTGCTCATCAGGCCGCAGCCCACGAACAACTACAAAGACAGATGCTGTTAGAAAGAGAGAGATTTCCTCCACATCCCTCGATTGTTGCCCAACACGAGGAGTACTTAAGGCAGCAACGAGAGCGAGAACTTAAAGTACGGGCACTGGAAGAAGCTGCCCGAGGGTCACGACCATAA
- Protein Sequence
- MAQTQGEIRVGPGNQVKDVYARLPEYRPGVPPEQLSPDPEDTHIREELRWVPAMTLDSDLLMYLRAARSMAAFAGMCDGGCPEDGANAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHRDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRGGNGASTAGRTSGAATPAPEATENRPSPQPSEKNPGETSSVTEDDNDNESEDDSDSREAQYRCSHCFTTNSKDWQPGGKDRQILCWDCRTHYRKNNELPQLTVPTTAANTPPAEGPDESPQRMRTRNKGAKDQPTNNRSRPKRGGTETPEPKTPIKQSNTGNDKNSTPNGPGTPGKKKGKNDKQETPNKNRKRTQDKLDDGETDEKEGSVFKKKRERADSPASVISESGSINDEPESTEPSHDPSDVNGLPNINASNNNTAFSSTVTTSVSTIISTNNNVIMQDSLTNKPPPIKSDDVESKIITSVTTNITPTVPVITSSKIQSTNNVESIPLNVSIRLPEDINERKNLIKRNLEGALDMKDIKFNPASIKFGQDDIKKESNIKTEPIQPKKEEIKDEISESIVNQSTLQSFEQKPQYKTELIIPKVTVEKPIIKEELDSSNDASLLSISSKEDSSSQPPSHNLSYKDNSLYLPQNMNIKESISFGMKDPPLINHLQPKHAMNLKENKEHIVNMNHSSYLKDGRSQDQLTFGYQSRDPSRDSNNSAASTVIKMEPREEPMELTNQNRSEPQPYGNVQPLNIPQVIPMAQHLSQSSRASEEEKSRQEKSERPERIERSDHSQMQSSTPIGQPPLPMQSNNLVTIGGSQPPPGMSHYGFMPPYGHPHSPRTLDKPSPQHMQQQNEPQNLKIKQEVPDSLPQNNPPSSFATNYSSSSLPPSSQGLPPSASFVPPPNHLSDPLQSLKDVKVPGYLPPPQPPTSQTPSSSSSERPPSGPAIDSIKKEPDFGGPNISRSSVSPAQPISEKCLTPKTSSTPTPQVISQTPPLRQPPSSPHSAINLISPSSSTGSVGGGPSHPPVSLPGPPSHPYSGAMQPPHLMHPSFLHFHGHPGYPAYPFGAYPYPYAVPQPHAIPPPSSRADIACPPKSIDTVSATVMSSQHNTSSTVTTKRETREPDEHGGERHQSHEMTLTHHQSTSLNSSIHASVEKQNYGGSSHSITISHSTSTSSSQSVQHKVNQKTVRTSSPHTSVSQTTIQSNSSSSSVNQHTHHHTHTHHDRMSPSSAQLLRHGLHPKAPPPGGPPQTNPHHLMIQPPNMGHHPGALGPASLTGSSLDALRAHAAQAAANIQQQQQGAMHPPSTSPMNPPPKIIPEEVVKIEPDVEGSPEEDSQSSPIGPPRGPSPEPRIEDTECHRSQSAIFLRHWNRGEHNSCTRTDLTFKPVPDSKLARKREERLRKQAEREREERERAQAQARKIQTPDKADVKPPSRGPLESLSAPYERFPRPGFTDTPALRQLSEYARPHAGFSPGHMPRSLIPGAVMDPMLQYQLSMYGPGARERLELEHLEREKREREIRELRERELNDRLKEEIMKSGMRVPPNTVDPHWLEIQRRYAAAGLAGGPGGPPSLLPHHFALYPGASSAAQLSQMERERMERLGIPPTGGPGPGGPPGHPHHPAHAAAAQLEAAERLALATDPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPQQQQAQQEAAAAAAGFPLPASGTPGYPRPGLIPGRDAPLGLHHPDLLGRPYADQLAHQAAAHEQLQRQMLLERERFPPHPSIVAQHEEYLRQQRERELKVRALEEAARGSRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00197047;
- 90% Identity
- iTF_01307699; iTF_00376772;
- 80% Identity
- iTF_01307699;