Rfer008535.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- -
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000278.1:1166523-1172669[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-07 0.00014 22.2 0.9 3 45 21 79 19 80 0.83
Sequence Information
- Coding Sequence
- ATGGAAACCCCGGTCCAACAATCCTCACCGCGTGCAGTCCAGAAGGCGAAAAATATGTGCCGATTCACCCGCGAATTGGACAAAAAACTCATCGAATTGGTATCGCAGAACGAAGTTCTCTACGACACCAACCATAAAAATTACAAAGATCTGAACGTGCGTGACGACGTATGGTTAGCTATATCAACTATGGTGGGCAAGAGCGtGCAGGACTGCAAAACAAGGTGGCGCAGCCTACGAGACCTATACCACCGTAAAAAGAAAGACCTAAAGATGGGAAAGAAAATCAGGACTGCATGGGAATATATGGATAACATGGATTTTATGGAGGGCTTTACCACTGAGAGGAGACAAATTCTGGATGAAGACGAGGAAGTATCTGACGAAGAAGGAAACTTTAAGATTGAGATCAAAGAAGAGTTTGATAACAGCATGCCGGCTTGTAGTTTTTCTCGGCAAGAAGAAATGGTCTCTCCTCCAAAAAGGCAAAGAGCAGATGATTCTCACTGCAACAATTGTGACAACACAGCCAGTCTCGATCTACTAAAAGAGGTGCGAGAACTAACCAACCTACGCAACAATCCCATACGTAATTTTTTCGATTGTATGGCCATGACAGTCATGCGATTTCCCGCAGCACAAGCTGCCGAGGTAAAACTCAAAATATGTCAAATTGTTACCGAGATGGAGTGTAAAATTTCAGAAGAGACCGGTAACTATCCCGAGGAATTCCAGCAGTTCAACTAA
- Protein Sequence
- METPVQQSSPRAVQKAKNMCRFTRELDKKLIELVSQNEVLYDTNHKNYKDLNVRDDVWLAISTMVGKSVQDCKTRWRSLRDLYHRKKKDLKMGKKIRTAWEYMDNMDFMEGFTTERRQILDEDEEVSDEEGNFKIEIKEEFDNSMPACSFSRQEEMVSPPKRQRADDSHCNNCDNTASLDLLKEVRELTNLRNNPIRNFFDCMAMTVMRFPAAQAAEVKLKICQIVTEMECKISEETGNYPEEFQQFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -