Rfer001234.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- Iswi
- Assembly
- GCA_014462685.1
- Location
- JAACXV010013045.1:45094-48932[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-05 0.013 15.9 0.0 3 41 791 830 790 830 0.95 2 2 0.0047 5.4 7.6 0.0 3 21 893 912 891 916 0.90
Sequence Information
- Coding Sequence
- ATGTCCCAAACAGAGGACACGACAGACCATACAGAAGTTGCCGAAAGTGGCggAAACGATAGAGATGATTCGTCGTCGGACGCAAATTCGAAAAATGAGGATTTCGACACAAAATTGGCCACGGACCGCGGTAAAAGGTTCGATTATTTACTCaaacaaacagaaatattttcacatttcaTGAACCAGTCAAAAACACCCACAAAACCTAAATCAGGGAGACCTAAGAAAAATAAGGAAGATGTGGCAGATCACAGGCACCGGAAAACTGAACAGGAAGAGGATGAGGAATTGCTAGCTGAAACAAACACTAAGACAAAGGCAATGATACGGTTTGAATCCTCTCctttctatattaaaaatggTGAAATGAGAGATTATCAAATCAGAGGTTTGAACTGGATGATTTCACTATATGAGAATGGTATAAATGGTATATTAGCTGATGAAATGGGTTTGGGTAAAACTCTACAGACTATATCATTATTGGGTTTTATGAAACATTATAAGAACACCCCTGGGCCCCATATTGTCATTGTTCCAAAATCCACTCTGTCAAATTGGATGAACGAGTTTAAAAAATGGTGTCCTTCTCTGAGGGCCGTGTGTTTAATTGGAGATCAAGAAGCCAGAAATACATTTATAAGAGAGGTGATGATGCCAGGTGAATGGGATGTATGTGTTACTTCATATGAAATGTGTATAAAGGAAAAATCGGTATTCAAAAAATTCAACTGGCGGTACATGGTGATCGACGAAGCTCATAGGATTAAGAACGAAAAATCGAAACTGTCGGAAATTCTCAGGGAATTCAAGACTACCAATAGATTATTATTGACTGGTACTCCATTGCAAAACAACCTCCACGAACTCTGGGCTTTGCTCAACTTTCTTTTACCTGATGTGTTTAACTCGTCGGATGACTTTGATTCTTGGTTTAACACCAATCAGTGTCTGGGTGATAATGCTTTGGTGGAACGGTTGCATGCTGTTTTAAAGCCATTTCTGTTGAGGAGGTTGAAGTCTGAGGTCGAGAAGCGGCTGAAACCCAAGAAGGAAGTCAAAGTGTATGTTGGTTTGAGTAAAATGCAGAGAGAGTGGTACACCAAAGTGCTGTTAAAGGATATTGATGTAGTGAACGGGGCGGGCAAAGTGGAGAAAATGCGCCTGCAAAATATTCTGATGCAGTTGCGCAAGTGCTCAAATCACCCGTATTTGTTTGATGGTGCCGAACCCGGCCCTCCTTACACTACCGACCAACATATAGTGTATAACTGTGGCAAAATGGTGATTCTGGATAAATTACTTCCTAAACTTCAAGAGCAGGGCAGCAGGGTTCTGATTTTCTCCCAAATGACGCGTATGTTGGATATCTTGGAGGATTATTGTCATTGGAAGGCGTATTGTTACTGTAGGCTTGATGGACAGACACCACACGAAGACAGACAAAGACAGATAAACGAGTATAACGAGGACAACAGCAAGAAATTCATCTTCATGTTGTCGACAAGAGCGGGTGGTTTGGGAATCAACTTAGCCACTGCCGACGTCGTCATCATTTACGATTCCGACTGGAACCCGCAGATGGATCTCCAAGCCATGGACAGAGCTCATAGAATCGGCCAAAAGAAACAAGTCCGCGTTTTTCGATTCATAACAGAGAACACTGTGGAGGAGAAAATCGTCGAGAGGGCGGAGGTGAAACTGCGGCTGGACAAGCTGGTTATCCAGCAGGGTCGACTGGTAGACTCCAAGGCGCAGACTCTAAACAAGGACGAGATGTTGAACATGATTAGGCACGGAGCGAACCATGTGTTCGCGTCCAAAGATTCTGAGATTACCGATGAGGATATCGACACGATTCTGGAGAGAGGAGAGGAGAAGACCCAGCAGCTAGCACAAAAAATGGAGAGCCTCGGCGAGTCGTCCCTCAGAAACTTTACCGTAGACACGCCCACGGAGTCGGTGTACAAGTTCGAGGGCGAGGATTATCGAGAAAAACAAAAGACCATCGGCATCAGCAACTGGATCGAGCCACCCAAAAGAGAGCGAAAGGCCAACTACGCGGTCGACGCCTATTTCCGCGAAGCTCTCCGAGTGTCCGAGCCCAAAGCCCCGAAGGCCCCTCGTCCCCCCAAGCAGCCCATTGTGCAGGACTTTCAGTTCTTCCCGCCGCGCCTCTTCGAACTGCTGGATCAAGAAATCTATTTCTATAGGAAGTCGCTGGGTTACAAAGTGCCGAAGAATTTGGAGCTAGGCTCTGATGCCACAAAACAACAGAGAGAGGAGCAGAGGAAGATTGACGAGTCCGAAGCGCTGACGGAAGAGGAACAACAGGAAAAAGAGACCCTATTGACGCAAGGATTTACTAATTGGAGCAAAAGAGATTTCAATCAGTTCATCAAAGCGAACGAGAAATACGGGCGCGACGACATCGAGAACATCGCCAAAGATGTGGAGGGTAAGACGCCCGAGGAAGTCATGGAATACAGCGCGGTGTTCTGGGAAAGGTGCCACGAGCTGCAGGACATCGATAGGATCATGGCTCAAATCGAACGGGGTGAAACCAAGATCCAGCGCAGGGCGAGCATCAAGAGAGCTTTGGATGCTAAGATGGCCAGGTATCGGGCGCCTTTCCATCAGCTTCGCATCGCCTACGGCAACAACAAGGGCAAGAACTACACGGAGGAGGAGGATAGGTTCTTGGTATGCATGCTACACAAACTGGGATTCGACAGGGAGAACGTGTACGAAGAACTTCGGGCGGCGGTCAGGGCCTCGCCTCAGTTCAGGTTCGATTGGTTCCTGAAATCGAGGACGGCCATGGAGCTACAGAGACGCTGTAACACTCTGATTACGCTGATCGAGCGGGAGAATGCCGAATTGGAAGAAAGAGAAAAgaatgaaaagaaaaagaagaccCCTAAGGCTGGCCAAGTTACAGGCACCCCAACACAAATCGCCGCTAAATCAGGACAGAAGAGGAAGAACGATAGTACAGGCGGAGCCAGTGtggagaaaaagaagaaaaagaaataa
- Protein Sequence
- MSQTEDTTDHTEVAESGGNDRDDSSSDANSKNEDFDTKLATDRGKRFDYLLKQTEIFSHFMNQSKTPTKPKSGRPKKNKEDVADHRHRKTEQEEDEELLAETNTKTKAMIRFESSPFYIKNGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGFMKHYKNTPGPHIVIVPKSTLSNWMNEFKKWCPSLRAVCLIGDQEARNTFIREVMMPGEWDVCVTSYEMCIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNQCLGDNALVERLHAVLKPFLLRRLKSEVEKRLKPKKEVKVYVGLSKMQREWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDQHIVYNCGKMVILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWKAYCYCRLDGQTPHEDRQRQINEYNEDNSKKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDSKAQTLNKDEMLNMIRHGANHVFASKDSEITDEDIDTILERGEEKTQQLAQKMESLGESSLRNFTVDTPTESVYKFEGEDYREKQKTIGISNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYFYRKSLGYKVPKNLELGSDATKQQREEQRKIDESEALTEEEQQEKETLLTQGFTNWSKRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVMEYSAVFWERCHELQDIDRIMAQIERGETKIQRRASIKRALDAKMARYRAPFHQLRIAYGNNKGKNYTEEEDRFLVCMLHKLGFDRENVYEELRAAVRASPQFRFDWFLKSRTAMELQRRCNTLITLIERENAELEEREKNEKKKKTPKAGQVTGTPTQIAAKSGQKRKNDSTGGASVEKKKKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00830233;
- 90% Identity
- iTF_00413497;
- 80% Identity
- -