Rfer005872.1
Basic Information
- Insect
- Rhynchophorus ferrugineus
- Gene Symbol
- MTA1
- Assembly
- GCA_014462685.1
- Location
- JAACXV010000322.1:297450-306685[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-11 6.8e-08 32.8 0.2 2 46 275 320 274 320 0.96 2 2 9.3 1.1e+04 -3.0 1.7 36 45 407 416 398 416 0.77
Sequence Information
- Coding Sequence
- ATGTCGACCAACATGTATCGGATCGGAGATTATGTGTATTTCGAAACATCTTCGACATCGCCGTACCAAATTCGGCGGATAGAAGAGCTGAACAAGACCCCATCAGGAAATGTGGAAGCTAAAGTGATGTGTTTTTATAGGAGACGAGACCTACCGGCCCAGTTAATCCAGCTAGCTGACAAACACCAATGTGCCTTAGATGAACCGAATGGTAGTCCTATGTCAGATTCATCGCGTTCGAGCGAGCAACTCGGTCCAAAACAGCGTCATCAAATGAAACACCGAGAATTATTTCTATCCAGACAGGTGGAAACCCTTCCTGCTACCCATATACGTGGAAAATGTTCCGTGACCCTCTTCAACGAAACAGAAGCTCTTTCCTCCTACCTTAACAAGGACGACATGTTCTTCTACTGTTTGGTGTACGACCCTACACAGAAAACCCTTCTGGCTGACAAGGGGGAGATCCGTGTAGGTAGTCGTTATCAGTGCGATATCCAGCCGCTGCTTCGTGAAGGTGAAACTGATGGCCGCGAACTTACCGAAACGGAGATGCTGGTTTGGACGCCACATCATGATCTCAACGATCGACAGATCGACCAATTCTTGGTCGTATCCCGGTCGGTCGGTACATTCGCCAGAGCATTGGACTGCAGCTCTAGCGTTAAGCAGCCATCGCTGCATATGAGCGCCGCCGCGGCCAGCAGAGACATTACCCTGTTTCACGCGATGGACACCCTGCACAGGCATAAGTACGATTTGGCCGGGGCACTCTGTTCTCTCGTACCGTCCAGTGGTCCGGTTTTATGTCGCGATGAGATGGAGGAGTGGAGTGCTTCCGAAGCGAACTTGTTCGAGGAGGCATTGGACAAGTACGGCAAGGACTTCAATGACATCAGGCAAGACTTTTTGCCATGGAAAacgctgaaaaatataattgaatactaCTATATGTGGAAAACGACTGATAGGTATGTTCAACAAAAAAGAGTAAAAGCTGTAGAAGCGGAATCAAAATTAAAGCAAGTCTACATTCCTAACTATAATAAACCGAATCCTGCGGCGCTTAATAATAACAAAGGCGTATTGAATGGCAGCAGCAACGGAAGCACCGATCCGGCCGTTTCCCTTGGTGGCAAAGCGTGCGAATCCTGCAATGttaCCGCGTCTTCTCAGTGGTACGCGTGGGGCCCATCGCATATGCAGTGTCGATTGTGCCAGCAGTGTTGGTCTTACTGGAAAAAATATGGGGGTTTAAAAATACCTACACGCTTCGGTGACGGGGCCGACTTCGAGAATTGTGGGAAAAAACGTTCAGGAAGCGACGTAGAAGACGATAAAGGTATGGGACACCGTCCTCATCGATGTAATATTGGAGGATGTGGAAAAGAATTTAAACTAAAAGCCCACCTTGGACGGCATTATGCCACAGCACACGGTATTACTGTCCGCGCAGGCTCACCGCGCCCTGTTATGAAGACCAGAACAgctttttatttgttgacgacGCCACTAACACGCCTTTCAAGACGCCTTTGTCGTCACATTATGCGACCCAGGCATGCTGCTCGAGCACCCTTTTTCGCTATCAATATTCAAGCGGTGAAACAGGAATGTACAACTCAGATGGCGAATAAAACGCAACATGAACTGCAATTACTAATGACGTACCGGAAGAAAAACCGGGGCAGTGTGACGGCTATAGCGACGAAACTTGGACGACCCGGACCAGTCACGCCTCAATGGCTTATACTGACTGATAAGGCTCTTCTACCACAACCGGACGTAGTGGCTTTTCCGAAACCACCAAAGGGACCAGATGGTAGTTTGCTATACGAAAGGGTCCCTAATAAACCAGAAGCTGAAAAAATACCTCTAAACAATATGTCCCCATCGTTGAAACGTAGAACATATGAAGAAATGAACGGCATTGACAGTTCCTCATTGAACGCGCCATCCGCCAAAAGAATAGCCAAGGAACCTATGGCCCTGACGCGGCATTCCGCCGTGCCCCCCATAATGCCGGGGGCGCTGCCAGCGGTCGCTGCGCCTGTGCCCCCCGTGCCCGCACCCCTCCCCGTCCCTCTTACGGTACCACCCATGCCGGAACAGTACCAGGCGATGATGGCGGCCGCGGCGGCACAAGCTCAAATTACCCCTGGGATGATGGGAACGGTACCTCGGCATGTTGCCCACGTCAATGGCAAACCGAAAATCGCACAAATGACTAGATCCGGGTCTGGTCGAAAACAAGTCATCAGTTGGATGGACGCTCCTGATGATCTATATTTTAGGGCTACGGAACAGACTAAAAAAATGCGACGCCAAATAACCCTCCCGGAACTTCGAAGGGCGGCCCGAAAACCATGGCGCGTTCTCAAAAACAAAATGGACGATCTACAGGTCGTCGTTCTGGATTGA
- Protein Sequence
- MSTNMYRIGDYVYFETSSTSPYQIRRIEELNKTPSGNVEAKVMCFYRRRDLPAQLIQLADKHQCALDEPNGSPMSDSSRSSEQLGPKQRHQMKHRELFLSRQVETLPATHIRGKCSVTLFNETEALSSYLNKDDMFFYCLVYDPTQKTLLADKGEIRVGSRYQCDIQPLLREGETDGRELTETEMLVWTPHHDLNDRQIDQFLVVSRSVGTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLHRHKYDLAGALCSLVPSSGPVLCRDEMEEWSASEANLFEEALDKYGKDFNDIRQDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNYNKPNPAALNNNKGVLNGSSNGSTDPAVSLGGKACESCNVTASSQWYAWGPSHMQCRLCQQCWSYWKKYGGLKIPTRFGDGADFENCGKKRSGSDVEDDKGMGHRPHRCNIGGCGKEFKLKAHLGRHYATAHGITVRAGSPRPVMKTRTAFYLLTTPLTRLSRRLCRHIMRPRHAARAPFFAINIQAVKQECTTQMANKTQHELQLLMTYRKKNRGSVTAIATKLGRPGPVTPQWLILTDKALLPQPDVVAFPKPPKGPDGSLLYERVPNKPEAEKIPLNNMSPSLKRRTYEEMNGIDSSSLNAPSAKRIAKEPMALTRHSAVPPIMPGALPAVAAPVPPVPAPLPVPLTVPPMPEQYQAMMAAAAAQAQITPGMMGTVPRHVAHVNGKPKIAQMTRSGSGRKQVISWMDAPDDLYFRATEQTKKMRRQITLPELRRAARKPWRVLKNKMDDLQVVVLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00830837;
- 90% Identity
- iTF_01307698;
- 80% Identity
- iTF_01307698;